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List of works by Pieter C. Dorrestein

'Omics' of natural products and redox biology

scientific article published on 01 February 2011

3D molecular cartography using LC-MS facilitated by Optimus and 'ili software.

scientific article published on 21 December 2017

47.2 EARLY-LIFE PREBIOTICS, PROBIOTICS, AND A STRESS ROBUST PHENOTYPE ⬇️

scholarly article

A Convolutional Neural Network-Based Approach for the Rapid Annotation of Molecularly Diverse Natural Products

scientific article published on 21 February 2020

A Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles ⬇️

scientific article published on 01 November 2020

A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria

scientific article published on 22 April 2020

A Maldiisotopic Approach to Discover Natural Products: Cryptomaldamide, a Hybrid Tripeptide from the Marine Cyanobacterium Moorea producens. ⬇️

scientific article published on 27 April 2017

A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria

scientific article published on 06 January 2021

A Prebiotic Diet Alters the Fecal Microbiome and Improves Sleep in Response to Sleep Disruption in Rats

scientific article published on 01 January 2022

A Prebiotic Diet Alters the Fecal Microbiome and Improves Sleep in Response to Sleep Disruption in Rats

scientific article published on 24 May 2022

A Prebiotic Diet Containing Galactooligosaccharides and Polydextrose Produces Dynamic and Reproducible Changes in the Gut Microbial Ecosystem in Male Rats

scientific article published on 6 June 2024

A UHPLC-HRMS based metabolomics and chemoinformatics approach to chemically distinguish 'super foods' from a variety of plant-based foods

scientific article published on 24 December 2019

A Universal Gut-Microbiome-Derived Signature Predicts Cirrhosis

scientific article published on 24 June 2020

A bacterial pathogen co-opts host plasmin to resist killing by cathelicidin antimicrobial peptides

scientific article

A community resource for paired genomic and metabolomic data mining

scientific article published in 2021

A highly efficient, high-throughput lipidomics platform for the quantitative detection of eicosanoids in human whole blood ⬇️

scientific article published on October 26, 2012

A mass spectrometry-guided genome mining approach for natural product peptidogenomics

scientific article published on 9 October 2011

A metabolomics guided exploration of marine natural product chemical space

scientific article

A monovalent streptavidin with a single femtomolar biotin binding site

scientific article

A multiomic analysis of in situ coral-turf algal interactions

scientific article published on 01 June 2020

A novel Entamoeba histolytica cysteine proteinase, EhCP4, is key for invasive amebiasis and a therapeutic target

scientific article

A phosphopantetheinylating polyketide synthase producing a linear polyene to initiate enediyne antitumor antibiotic biosynthesis

scholarly article

A sliding docking interaction is essential for sequential and processive phosphorylation of an SR protein by SRPK1

scientific article

Active-site models for complexes of quinolinate synthase with substrates and intermediates

scientific article

Activity screening of carrier domains within nonribosomal peptide synthetases using complex substrate mixtures and large molecule mass spectrometry

scientific article published on February 2006

Acyltransferase mediated polyketide release from a fungal megasynthase

scientific article

Advancements in capturing and mining mass spectrometry data are transforming natural products research

scientific article published on 09 October 2021

Aerobic tryptophan degradation pathway in bacteria: novel kynurenine formamidase

scientific journal article

American Gut: an Open Platform for Citizen Science Microbiome Research

article

An Elegan(t) Screen for Drug-Microbe Interactions

scientific article published in May 2017

An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria

scientific article (publication date: 3 May 2016)

An untargeted metabolomics analysis of exogenous chemicals in human milk and transfer to the infant

scientific article published in 2022

Analysis of the ketosynthase-chain length factor heterodimer from the fredericamycin polyketide synthase

scientific article published on August 2011

Analytical chemistry: Virulence caught green-handed

scientific article

Animal Models for Microbiome Research and Drug Discovery ⬇️

scholarly article

Antibiotic discovery is a walk in the park

scientific article published on 09 December 2016

Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis.

scientific article published on February 2017

Application of bacterial cytological profiling to crude natural product extracts reveals the antibacterial arsenal of Bacillus subtilis

scientific article published on 09 December 2015

Applying Tissue Separation and Untargeted Metabolomics to Understanding Lipid Saturation Kinetics of Host Mitochondria and Symbiotic Algae in Corals Under High Temperature Stress

scientific article published in 2022

Are microbiome studies ready for hypothesis-driven research?

scientific article published on 27 July 2018

Arginine methylation of HSP70 regulates retinoid acid-mediated RARβ2 gene activation

scientific article published on 16 June 2015

Assessing Specialized Metabolite Diversity in the Cosmopolitan Plant Genus Euphorbia L

scientific article published on 02 July 2019

Assessing specialized metabolite diversity of Alnus species by a digitized LC-MS/MS data analysis workflow

scientific article published on 12 February 2020

Assessment of styrene‐divinylbenzene polymer (PPL) solid‐phase extraction and non‐targeted tandem mass spectrometry for the analysis of xenobiotics in seawater

scientific article published in 2021

Assessment of the microbiome during bacteriophage therapy in combination with systemic antibiotics to treat a case of staphylococcal device infection

scientific article published in 2021

Author Correction: Inflammation-induced IgA+ cells dismantle anti-liver cancer immunity

scientific article published in Nature

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

scientific article published on 09 November 2020

Automated genome mining of ribosomal peptide natural products

scientific article

Automated querying and identification of novel peptides using MALDI mass spectrometric imaging

scientific article

Bacillus subtilis biofilm matrix components target seed oil bodies to promote growth and anti-fungal resistance in melon

scientific article published in 2022

Bacterial biosynthesis and maturation of the didemnin anti-cancer agents. ⬇️

scientific article

Balance Trees Reveal Microbial Niche Differentiation.

scientific article published on 17 January 2017

Before platelets: the production of platelet-activating factor during growth and stress in a basal marine organism

scientific article published in 2018

Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry

scientific article published on 4 May 2015

Best practices for analysing microbiomes

scientific article published on 01 July 2018

Bile salt hydrolase catalyses formation of amine-conjugated bile acids

scholarly article

Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut

scientific article published in 2023

Bioactivity-Based Molecular Networking for the Discovery of Drug Leads in Natural Product Bioassay-Guided Fractionation.

scientific article published on 2 March 2018

Bioactivity-guided genome mining reveals the lomaiviticin biosynthetic gene cluster in Salinispora tropica ⬇️

scientific article published on 3 May 2013

Biochemical Establishment and Characterization of EncM's Flavin-N5-oxide Cofactor.

scientific article

Bioprospecting Portuguese Atlantic coast cyanobacteria for bioactive secondary metabolites reveals untapped chemodiversity

article

Biosynthesis of the Thiazole Moiety of Thiamin Pyrophosphate (Vitamin B1) ⬇️

scientific article published on October 28, 2003

Biosynthesis of the beta-amino acid moiety of the enediyne antitumor antibiotic C-1027 featuring beta-amino acyl-S-carrier protein intermediates

scientific article published in August 2005

Biosynthetic multitasking facilitates thalassospiramide structural diversity in marine bacteria. ⬇️

scientific article published on 11 January 2013

Biosynthetic origin of natural products isolated from marine microorganism-invertebrate assemblages

scientific article

Can Statistical Evaluation Tools for Chromatographic Method Development Assist in the Natural Products Workflow? A Case Study on Selected Species of the Plant Family Malpighiaceae

scientific article published on 16 November 2020

Capturing bacterial metabolic exchange using thin film desorption electrospray ionization-imaging mass spectrometry

scientific article published on March 2010

Changes in secondary metabolic profiles of Microcystis aeruginosa strains in response to intraspecific interactions

scientific article (publication date: February 2016)

Characterization of CA-MRSA TCH1516 exposed to nafcillin in bacteriological and physiological media

scientific article published on 26 April 2019

Characterization of a new tailoring domain in polyketide biogenesis: the amine transferase domain of MycA in the mycosubtilin gene cluster

scientific article published in November 2005

Characterization of the bacterial community of the chemically defended Hawaiian sacoglossan Elysia rufescens

scientific article

Characterization of the formation of the pyrrole moiety during clorobiocin and coumermycin A1 biosynthesis

scientific article

Chemical Gradients of Plant Substrates in an <i>Atta texana</i> Fungus Garden

scientific article published on 03 August 2021

Chemical Proportionality within Molecular Networks

scientific article published in 2021

Chemical interplay and complementary adaptative strategies toggle bacterial antagonism and co-existence

scientific article published on 01 July 2021

Chemical signaling at the eukaryotic/prokaryotic interface

scientific article published on 01 March 2018

Chemically informed analyses of metabolomics mass spectrometry data with Qemistree

scientific article published on 16 November 2020

Chemically-informed Analyses of Metabolomics Mass Spectrometry Data with Qemistree

scientific article published on 5 May 2020

Chemoenzymatic Synthesis of Acyl Coenzyme A Substrates Enables in Situ Labeling of Small Molecules and Proteins

scientific article

Clostridiolysin S, a post-translationally modified biotoxin from Clostridium botulinum

scientific article

Co-occurrence network analysis reveals the alterations of the skin microbiome and metabolome in adults with mild to moderate atopic dermatitis

scholarly article

Codon randomization for rapid exploration of chemical space in thiopeptide antibiotic variants

scientific article

Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria ⬇️

scientific article

Comparative Genomics and Metabolomics Analyses of Clavulanic Acid-Producing Streptomyces Species Provides Insight Into Specialized Metabolism

scientific article published on 08 November 2019

Comparative genomics and metabolic profiling of the genus Lysobacter

scientific article

Comparison of Cosine, Modified Cosine, and Neutral Loss Based Spectrum Alignment For Discovery of Structurally Related Molecules

scientific article published in 2022

Competitive strategies differentiate closely related species of marine actinobacteria.

scientific article published on 4 August 2015

Comprehensive mass spectrometry-guided phenotyping of plant specialized metabolites reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae

scientific article published on 25 March 2019

Comprehensive mass spectrometry-guided plant specialized metabolite phenotyping reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae

scientific article published on 7 November 2018

Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491)

proceedings

Computational Removal of Undesired Mass Spectral Features Possessing Repeat Units via a Kendrick Mass Filter

scientific article published on 28 September 2018

ConCISE: Consensus Annotation Propagation of Ion Features in Untargeted Tandem Mass Spectrometry Combining Molecular Networking and In Silico Metabolite Structure Prediction

scientific article published in 2022

Connecting Chemotypes and Phenotypes of Cultured Marine Microbial Assemblages by Imaging Mass Spectrometry

scientific article published on 05 May 2011

Connecting chemotypes and phenotypes of cultured marine microbial assemblages by imaging mass spectrometry.

scientific article published on 13 May 2011

Consent insufficient for data release-Response

scientific article published on 01 May 2019

Consumption of Fermented Foods Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

scientific article published on 17 March 2020

Convergence of isoprene and polyketide biosynthetic machinery: isoprenyl-S-carrier proteins in the pksX pathway of Bacillus subtilis

scholarly article

Coral thermal stress and bleaching enrich and restructure reef microbial communities via altered organic matter exudation

Correction to 'Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence'.

scientific article published in August 2016

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

scientific article published on 19 June 2017

Cover Picture: Connecting Chemotypes and Phenotypes of Cultured Marine Microbial Assemblages by Imaging Mass Spectrometry (Angew. Chem. Int. Ed. 26/2011)

scientific article published on 11 May 2011

Creating a 3D microbial and chemical snapshot of a human habitat

scientific article published on 27 February 2018

Cryptic Species Account for the Seemingly Idiosyncratic Secondary Metabolism of Sarcophyton glaucum Specimens Collected in Palau

scientific article published on 23 January 2020

Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

scientific article

Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases

scientific article

Cystic Fibrosis Rapid Response: Translating Multi-omics Data into Clinically Relevant Information

scholarly article by Ana Georgina Cobián Güemes et al published 16 April 2019 in mBio

Cytotoxic Microcolin Lipopeptides from the Marine Cyanobacterium Moorea producens

scientific article published on 30 August 2019

Cytotoxic veraguamides, alkynyl bromide-containing cyclic depsipeptides from the marine cyanobacterium cf. Oscillatoria margaritifera. ⬇️

scientific article

Data-independent microbial metabolomics with ambient ionization mass spectrometry.

scientific article

Database-independent molecular formula annotation using Gibbs sampling through ZODIAC

scientific article published in 2020

De Novo Peptide Sequencing Reveals Many Cyclopeptides in the Human Gut and Other Environments

scientific article published on 18 December 2019

Deciphering ocean carbon in a changing world

scientific article

Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

scientific article

Depression in Individuals Coinfected with HIV and HCV Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

scientific article published on 29 September 2020

Dereplication and de novo sequencing of nonribosomal peptides

scientific article published on 13 July 2009

Dereplication of microbial metabolites through database search of mass spectra

scientific article published in Nature Communications

Dereplication of peptidic natural products through database search of mass spectra

scientific article

Detection of Natural Products and Their Producers in Ocean Sediments

scientific article published on 04 April 2019

Dichlorination of a pyrrolyl-S-carrier protein by FADH2-dependent halogenase PltA during pyoluteorin biosynthesis

scientific article

Did a plant-herbivore arms race drive chemical diversity in Euphorbia?

scientific article published on 15 May 2018

Dietary prebiotics alter novel microbial dependent fecal metabolites that improve sleep

scientific article published on 02 March 2020

Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae

scientific article

Direct cloning and refactoring of a silent lipopeptide biosynthetic gene cluster yields the antibiotic taromycin A. ⬇️

scientific article published on 21 January 2014

Direct detection of fungal siderophores on bats with white-nose syndrome via fluorescence microscopy-guided ambient ionization mass spectrometry

scientific article

Discovery and Synthesis of Caracolamide A, an Ion Channel Modulating Dichlorovinylidene Containing Phenethylamide from a Panamanian Marine Cyanobacterium cf. Symploca Species.

scientific article

Discovery of a Mosaic-Like Biosynthetic Assembly Line with a Decarboxylative Off-Loading Mechanism through a Combination of Genome Mining and Imaging.

scientific article published on 26 September 2016

Discovery of a widely distributed toxin biosynthetic gene cluster

scholarly article

Dissecting non-ribosomal and polyketide biosynthetic machineries using electrospray ionization Fourier-Transform mass spectrometry

scientific article published on 28 September 2006

Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals

scientific article published on 31 January 2022

Diversity of Aquatic Pseudomonas Species and Their Activity against the Fish Pathogenic Oomycete Saprolegnia

scientific article

Dysregulation of Glycerophosphocholines in the Cutaneous Lesion Caused by in Experimental Murine Models

EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

scientific article published on 15 March 2021

Early-Career Scientists Shaping the World

scientific article published on 07 May 2019

Editorial: Mass spectrometry of small molecules and natural products

scientific article

Effects of Immunization With the Soil-Derived Bacterium <i>Mycobacterium vaccae</i> on Stress Coping Behaviors and Cognitive Performance in a "Two Hit" Stressor Model

scientific article published on 01 January 2020

Elucidating the CXCL12/CXCR4 signaling network in chronic lymphocytic leukemia through phosphoproteomics analysis

scientific article

Emerging Priorities for Microbiome Research

scientific article published on 19 February 2020

Emerging mass spectrometry techniques for the direct analysis of microbial colonies

scientific article

Enhanced Characterization of Drug Metabolism and the Influence of the Intestinal Microbiome: A Pharmacokinetic, Microbiome, and Untargeted Metabolomics Study

scientific article published on 26 March 2020

Enhancing untargeted metabolomics using metadata-based source annotation

scientific article published in 2022

Environmentally Friendly Procedure Based on Supercritical Fluid Chromatography and Tandem Mass Spectrometry Molecular Networking for the Discovery of Potent Antiviral Compounds from Euphorbia semiperfoliata.

scientific article published on 19 September 2017

Enzymatic resistance to the lipopeptide surfactin as identified through imaging mass spectrometry of bacterial competition.

scientific article

Enzymatic synthesis of resorcylic acid lactones by cooperation of fungal iterative polyketide synthases involved in hypothemycin biosynthesis

scientific article published on April 2010

Erratum: Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides

scientific article published on 23 January 2017

Erratum: Inflammation-induced IgA+ cells dismantle anti-liver cancer immunity

scientific article published on 22 November 2017

Evaluating Organism-Wide Changes in the Metabolome and Microbiome following a Single Dose of Antibiotic

scientific article published in 2020

Evolution of metabolic divergence in Pseudomonas aeruginosa during long-term infection facilitates a proto-cooperative interspecies interaction

scientific article published on 18 December 2015

Expanding the Chemical Repertoire of the Endophyte Streptomyces albospinus RLe7 Reveals Amphotericin B as an Inducer of a Fungal Phenotype.

scientific article

Expanding the Described Metabolome of the Marine Cyanobacterium Moorea producens JHB through Orthogonal Natural Products Workflows ⬇️

scientific article

Expansion of the mycobacterial "PUPylome"

scientific article

Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome

scientific article published on 12 March 2018

FT-ICR-MS Characterization of Intermediates in the Biosynthesis of the α-Methylbutyrate Side Chain of Lovastatin by the 277 kDa Polyketide Synthase LovF ⬇️

scientific article published on December 22, 2010

Facile detection of acyl and peptidyl intermediates on thiotemplate carrier domains via phosphopantetheinyl elimination reactions during tandem mass spectrometry

scientific article published on October 2006

Feature-based molecular networking in the GNPS analysis environment

scientific article published on 24 August 2020

Finding the missing links among metabolites, microbes, and the host

scientific article

Fine scale transitions of the microbiota and metabolome along the gastrointestinal tract of herbivorous fishes

scientific article published on 23 May 2022

Formation of the chromophore of the pyoverdine siderophores by an oxidative cascade

scientific article published on 01 June 2003

Formation of the dimethylbenzimidazole ligand of coenzyme B(12) under physiological conditions by a facile oxidative cascade

scientific article published in June 2003

From Sample to Multi-Omics Conclusions in under 48 Hours

scientific article (publication date: 26 April 2016)

From single cells to our planet-recent advances in using mass spectrometry for spatially resolved metabolomics

scientific article published on 10 January 2017

Functional genomics and metabolomics advance the ethnobotany of the Samoan traditional medicine “matalafi”

scientific article published in 2021

Fungal-bacterial interaction selects for quorum sensing mutants with increased production of natural antifungal compounds

scientific article published on 12 November 2020

GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser

scientific article published on 03 December 2021

Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

scientific article published on 07 October 2020

Genetic basis for the biosynthesis of the pharmaceutically important class of epoxyketone proteasome inhibitors.

scientific article

Genome Mining, Microbial Interactions, and Molecular Networking Reveals New Dibromoalterochromides from Strains of Pseudoalteromonas of Coiba National Park-Panama ⬇️

scientific article published on 03 September 2020

Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds.

scientific article published on 7 July 2015

Genome-wide high-throughput mining of natural-product biosynthetic gene clusters by phage display

scientific article

Genomic and Metabolomic Analysis of the Potato Common Scab Pathogen <i>Streptomyces scabiei</i>

scientific article published on 20 April 2021

Genomic insights into the physiology and ecology of the marine filamentous cyanobacterium Lyngbya majuscula.

scientific article

Global chemical analysis of biology by mass spectrometry

scientific article published on 05 July 2017

Global chemical effects of the microbiome include new bile-acid conjugations

scientific article published on 26 February 2020

Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules ⬇️

scientific article

Grazer-induced changes in molecular signatures of cyanobacteria

scientific article published in 2022

Heavy metal exposure causes changes in the metabolic health-associated gut microbiome and metabolites

article

Heterogeneous multimeric metabolite ion species observed in LC-MS based metabolomics data sets

scientific article published in 2022

Heterologous Expression in <i>Anabaena</i> of the Columbamide Pathway from the Cyanobacterium <i>Moorena bouillonii</i> and Production of New Analogs

scientific article published in 2022

Heterologous Expression of Cryptomaldamide in a Cyanobacterial Host

scientific article published on 12 November 2020

Heterologous expression of cryptomaldamide in a cyanobacterial host

scientific article published on 26 August 2020

High-Resolution Liquid Chromatography Tandem Mass Spectrometry Enables Large Scale Molecular Characterization of Dissolved Organic Matter

scientific article published in 2017

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

scientific article published on 23 June 2020

High-confidence structural annotation of metabolites absent from spectral libraries

scientific article published on 14 October 2021

Home chemical and microbial transitions across urbanization

scientific article published on 04 November 2019

Homogeneous matrix deposition on dried agar for MALDI imaging mass spectrometry of microbial cultures

scientific article published on 22 August 2015

Homospermidine Lipids: A Compound Class Specifically Formed during Fruiting Body Formation of Myxococcus xanthus DK1622.

scientific article published on 29 November 2017

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

scientific article published on 16 April 2019

Illuminating the dark matter in metabolomics

scientific article

Imaging mass spectrometry and MS/MS molecular networking reveals chemical interactions among cuticular bacteria and pathogenic fungi associated with fungus-growing ants

scientific article

Imaging mass spectrometry and genome mining via short sequence tagging identified the anti-infective agent arylomycin in Streptomyces roseosporus ⬇️

scientific article

Imaging mass spectrometry in microbiology ⬇️

scientific article published on 08 August 2011

Imaging mass spectrometry of a coral microbe interaction with fungi

scientific article published on 24 July 2013

Imaging mass spectrometry of intraspecies metabolic exchange revealed the cannibalistic factors of Bacillus subtilis

scientific article

Imaging mass spectrometry of natural products

scientific article

Impact of a transposon insertion in phzF2 on the specialized metabolite production and interkingdom interactions of Pseudomonas aeruginosa

scientific article published on 14 February 2014

Impacts of the Human Gut Microbiome on Therapeutics.

scientific article published on 2 October 2017

Implementations of the chemical structural and compositional similarity metric in R and Python

scientific article published on 11 February 2019

Incorporation of nonmethyl branches by isoprenoid-like logic: multiple beta-alkylation events in the biosynthesis of myxovirescin A1.

scientific article published on July 2007

Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides ⬇️

scientific article published on 31 October 2016

Inflammation-induced IgA+ cells dismantle anti-liver cancer immunity

scientific article

Initial Development toward Non-Invasive Drug Monitoring via Untargeted Mass Spectrometric Analysis of Human Skin

scientific article published on 10 June 2019

Intact polar diacylglycerol biomarker lipids isolated from suspended particulate organic matter accumulating in an ultraoligotrophic water column

scientific article published in 2016

Integrating Molecular Networking and Biological Assays To Target the Isolation of a Cytotoxic Cyclic Octapeptide, Samoamide A, from an American Samoan Marine Cyanobacterium ⬇️

scientific article published on 5 January 2017

Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery

scientific article published on 28 May 2021

Integrating ‘-omics’ and natural product discovery platforms to investigate metabolic exchange in microbiomes ⬇️

scientific article published on November 17, 2010

Integrative analysis of multimodal mass spectrometry data in MZmine 3

Interkingdom metabolic transformations captured by microbial imaging mass spectrometry

scientific article

Interleukin-17 Inhibition in Spondyloarthritis Is Associated With Subclinical Gut Microbiome Perturbations and a Distinctive Interleukin-25-Driven Intestinal Inflammation

scientific article published on 12 March 2020

Intermittent Hypoxia and Hypercapnia Accelerate Atherosclerosis, Partially via Trimethylamine-Oxide

scientific article published on 5 July 2017

Intermittent Hypoxia and Hypercapnia Alter Diurnal Rhythms of Luminal Gut Microbiome and Metabolome

scientific article published in 2021

Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome.

scientific article published in May 2018

Interpretation of tandem mass spectra obtained from cyclic nonribosomal peptides

scientific article published on June 2009

Interspecies interactions stimulate diversification of the Streptomyces coelicolor secreted metabolome ⬇️

scientific article

Introducing the USA Plant, Algae and Microbial Metabolomics Research Coordination Network (PAMM-NET)

scientific article published on 20 December 2014

Investigating nonribosomal peptide and polyketide biosynthesis by direct detection of intermediates on >70 kDa polypeptides by using Fourier-transform mass spectrometry

scientific article published on 01 June 2006

Investigation of Premyrsinane and Myrsinane Esters in Euphorbia cupanii and Euphobia pithyusa with MS2LDA and Combinatorial Molecular Network Annotation Propagation

scientific article published on 05 June 2019

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

scientific article

Ion mobility mass spectrometry enables the efficient detection and identification of halogenated natural products from cyanobacteria with minimal sample preparation ⬇️

scientific article published on November 15, 2011

Iron acquisition in the marine actinomycete genus Salinispora is controlled by the desferrioxamine family of siderophores

scientific article published on 14 August 2012

Kinetic isotope effect studies on the de novo rate of chromophore formation in fast- and slow-maturing GFP variants

scientific article

Laboratory evolution of Escherichia coli enables life based on fluorinated amino acids

scholarly article published 10 June 2019

Large‐scale tandem mass spectrum clustering using fast nearest neighbor searching

scientific article published in 2021

Learning representations of microbe-metabolite interactions

scientific article published on 04 November 2019

Legonaridin, a new member of linaridin RiPP from a Ghanaian Streptomyces isolate

scientific article published on 10 August 2015

Leucanicidin and Endophenasides Result from Methyl-Rhamnosylation by the Same Tailoring Enzymes in Kitasatospora sp. MBT66.

scientific article published on 16 December 2015

Lifestyle chemistries from phones for individual profiling

scientific article (publication date: 29 November 2016)

Linking genomics and metabolomics to chart specialized metabolic diversity

scientific article published on 12 May 2020

Lipopeptides from the tropical marine cyanobacterium Symploca sp. ⬇️

scientific article published on 3 March 2014

Lugdunomycin, an Angucycline-Derived Molecule with Unprecedented Chemical Architecture

article by Changsheng Wu et al published 25 February 2019 in Angewandte Chemie International Edition

Lugdunomycin, an Angucycline‐Derived Molecule with Unprecedented Chemical Architecture

MS/MS networking guided analysis of molecule and gene cluster families.

scientific article published on 24 June 2013

MS/MS-based networking and peptidogenomics guided genome mining revealed the stenothricin gene cluster in Streptomyces roseosporus ⬇️

scientific article published on 23 October 2013

Mammalian gut metabolomes mirror microbiome composition and host phylogeny

scientific article published on 13 December 2021

Marinopyrrole A target elucidation by acyl dye transfer

scientific article published on September 2009

Mass Difference Matching Unfolds Hidden Molecular Structures of Dissolved Organic Matter

scientific article published in 2022

Mass Spectrometry Analysis of Pseudomonas aeruginosa Treated with Azithromycin.

scientific article published on 24 March 2015

Mass Spectrometry Based Molecular 3D-Cartography of Plant Metabolites

scientific article

Mass Spectrometry Imaging Reveals Elevated Glomerular ATP/AMP in Diabetes/obesity and Identifies Sphingomyelin as a Possible Mediator

scientific article

Mass Spectrometry Uncovers the Role of Surfactin as an Interspecies Recruitment Factor

scientific article published on 22 February 2019

Mass Spectrometry-Based Chemical Cartography of a Cardiac Parasitic Infection.

scientific article published on 11 September 2017

Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats.

scientific article published on 12 October 2016

Mass spectral molecular networking of living microbial colonies

scientific article

Mass spectral similarity for untargeted metabolomics data analysis of complex mixtures.

scientific article

Mass spectrometry of natural products: current, emerging and future technologies

scientific article

Mass spectrometry searches using MASST

scientific article published on 01 January 2020

Mass spectrometry tools and workflows for revealing microbial chemistry

scientific article

Mass spectrometry-based metabolomics in microbiome investigations

scientific article published on 22 September 2021

Mechanism of action of thalassospiramides, a new class of calpain inhibitors

scientific article

Mechanistic studies on pyridoxal phosphate synthase: the reaction pathway leading to a chromophoric intermediate.

scientific article

Meta-mass shift chemical profiling of metabolomes from coral reefs.

scientific article published on 12 October 2017

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

scientific article published on 29 May 2015

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

scientific article published on 16 October 2019

MetaRiPPquest: A Peptidogenomics Approach for the Discovery of Ribosomally Synthesized and Post-translationally Modified Peptides

scientific article published on 3 December 2017

Metabolic Fingerprints from the Human Oral Microbiome Reveal a Vast Knowledge Gap of Secreted Small Peptidic Molecules

scientific article

Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in <i>Paenibacillus amylolyticus</i> in Response to <i>Xanthomonas retroflexus</i>

scientific article published on 29 March 2022

Metabolic profiling directly from the Petri dish using nanospray desorption electrospray ionization imaging mass spectrometry

scientific article published on 14 October 2013

Metabolites from Microbes Isolated from the Skin of the Panamanian Rocket Frog Colostethus panamansis (Anura: Dendrobatidae)

scientific article published on 13 October 2020

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs

scientific article published on 10 March 2020

Metabolomics of pulmonary exacerbations reveals the personalized nature of cystic fibrosis disease

scientific article published on 11 August 2016

Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence

scientific article

Metalloenzymes: Natural product nitrosation

scientific article published on September 2010

Methicillin-resistant Staphylococcus aureus bacterial nitric-oxide synthase affects antibiotic sensitivity and skin abscess development

scientific article published on 15 January 2013

Microbial Skin Inhabitants: Friends Forever

scientific article published on May 2016

Microbial competition between Bacillus subtilis and Staphylococcus aureus monitored by imaging mass spectrometry

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Microbial metabolic exchange in 3D.

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Microbial metabolic exchange--the chemotype-to-phenotype link

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Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

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Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians

scientific article published on 18 September 2018

Microbiome Tools for Forensic Science

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Microbiome-wide association studies link dynamic microbial consortia to disease

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Microbiota of healthy corals are active against fungi in a light-dependent manner ⬇️

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Microscopy ambient ionization top-down mass spectrometry reveals developmental patterning

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Minimum Information about a Biosynthetic Gene cluster.

scientific article published on August 2015

MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools

scientific article published on 16 July 2019

MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools

scientific article published on 31 May 2019

Molecular Commerce on Coral Reefs: Using Metabolomics to Reveal Biochemical Exchanges Underlying Holobiont Biology and the Ecology of Coastal Ecosystems

scientific article published on 23 July 2021

Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

scientific article published on 11 November 2016

Molecular Networking: A Useful Tool for the Identification of New Psychoactive Substances in Seizures by LC-HRMS

scientific article published on 25 November 2020

Molecular analysis of model gut microbiotas by imaging mass spectrometry and nanodesorption electrospray ionization reveals dietary metabolite transformations

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Molecular and Microbial Microenvironments in Chronically Diseased Lungs Associated with Cystic Fibrosis

scientific article published on 24 September 2019

Molecular and chemical dialogues in bacteria-protozoa interactions.

scientific article published on 6 August 2015

Molecular basis for chloronium-mediated meroterpene cyclization: cloning, sequencing, and heterologous expression of the napyradiomycin biosynthetic gene cluster ⬇️

scientific article published on 28 March 2007

Molecular cartography of the human skin surface in 3D

scientific article published on 30 March 2015

Molecular inter-kingdom interactions of endophytes isolated from Lychnophora ericoides

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Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species ⬇️

scientific article published on 9 April 2015

Molecular networking as a dereplication strategy

scientific article published on 11 September 2013

Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures

scientific article published on 01 September 2020

Multi-omics Analysis of Periodontal Pocket Microbial Communities Pre- and Posttreatment.

scientific article

Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity

scientific article published in 2022

Multi-omics of human plasma reveals molecular features of dysregulated inflammation and accelerated aging in schizophrenia

scientific article published on 05 November 2021

Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments

scientific article published on 6 June 2021

Multiomic Analyses of Nascent Preterm Infant Microbiomes Differentiation Suggest Opportunities for Targeted Intervention

scientific article published in 2022

Multiomics Analysis Provides Insight into the Laboratory Evolution of Escherichia coli toward the Metabolic Usage of Fluorinated Indoles

scientific article published in 2020

Multiplex de novo sequencing of peptide antibiotics

scientific article published on 28 October 2011

N-terminal ArgD peptides from the classical Staphylococcus aureus Agr system have cytotoxic and proinflammatory activities

scientific article

NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

scientific article published on 20 October 2021

NPOmix: A machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

NPOmix: a machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

scientific article published on 6 October 2021

NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery

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Native mass spectrometry-based metabolomics identifies metal-binding compounds

scientific article published in 2021

Native metabolomics identifies the rivulariapeptolide family of protease inhibitors ⬇️

scientific article published in 2022

Natural products as mediators of disease.

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Nerpa: A Tool for Discovering Biosynthetic Gene Clusters of Bacterial Nonribosomal Peptides

scientific article published on 11 October 2021

Neutrophilic proteolysis in the cystic fibrosis lung correlates with a pathogenic microbiome

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Niche partitioning of a pathogenic microbiome driven by chemical gradients

scientific article published on 26 September 2018

Non-target tandem mass spectrometry enables the prioritization of anthropogenic pollutants in seawater along the northern San Diego coast

Non-targeted tandem mass spectrometry enables the visualization of organic matter chemotype shifts in coastal seawater

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Nonribosomal peptides, key biocontrol components for Pseudomonas fluorescens In5, isolated from a Greenlandic suppressive soil

scientific article published on 17 March 2015

Novel phenol-soluble modulin derivatives in community-associated methicillin-resistant Staphylococcus aureus identified through imaging mass spectrometry

scientific article published on 27 February 2012

Observing the invisible through imaging mass spectrometry, a window into the metabolic exchange patterns of microbes

scientific article

Open Science Resources for the Mass Spectrometry-Based Analysis of SARS-CoV-2

scientific article published in 2021

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

scientific article published on 31 October 2019

Oxidative cascades: a facile biosynthetic strategy for the assembly of complex molecules

scientific article

PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression

scientific article

Paired microbiome and metabolome analyses associate bile acid changes with colorectal cancer progression

scientific article published on 29 August 2023

Palmyramide A, a cyclic depsipeptide from a Palmyra Atoll collection of the marine cyanobacterium Lyngbya majuscula ⬇️

scientific article

Paroxetine Administration Affects Microbiota and Bile Acid Levels in Mice

scientific article published on 04 June 2020

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

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Perspective: Dietary Biomarkers of Intake and Exposure-Exploration with Omics Approaches

scientific article published on 01 March 2020

Phenol soluble modulin (PSM) variants of community-associated methicillin-resistant Staphylococcus aureus (MRSA) captured using mass spectrometry-based molecular networking

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Phenotyping drug polypharmacology via eicosanoid profiling of blood.

scientific article published on 28 May 2015

Phosphoproteomic analysis of chemokine signaling networks.

scientific article

Phylogeny-Guided Isolation of Ethyl Tumonoate A from the Marine Cyanobacterium cf. Oscillatoria margaritifera ⬇️

scientific article published on July 13, 2011

Physicochemical properties determining drug detection in skin

scientific article published on 28 November 2021

Plasticity of Streptomyces coelicolor Membrane Composition Under Different Growth Conditions and During Development.

scientific article published on 22 December 2015

Policing starter unit selection of the enterocin type II polyketide synthase by the type II thioesterase EncL.

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Practical 4'-phosphopantetheine active site discovery from proteomic samples

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Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen

scientific article published on 07 March 2019

Primer on agar-based microbial imaging mass spectrometry

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Prioritizing Natural Product Diversity in a Collection of 146 Bacterial Strains Based on Growth and Extraction Protocols

scientific article published on 11 November 2016

Probing marine natural product defenses with DESI-imaging mass spectrometry

scientific article (publication date: 5 May 2009)

Probing the in vivo biosynthesis of scytonemin, a cyanobacterial ultraviolet radiation sunscreen, through small scale stable isotope incubation studies and MALDI-TOF mass spectrometry ⬇️

scientific article published on June 14, 2011

Production of the cannibalism toxin SDP is a multistep process that requires SdpA and SdpB.

scientific article published on 17 May 2013

Profiling the effect of nafcillin on HA-MRSA D712 using bacteriological and physiological media

scientific article published on 17 December 2019

Propagating annotations of molecular networks using in silico fragmentation

scientific article published on 18 April 2018

Proteasomal protein degradation in Mycobacteria is dependent upon a prokaryotic ubiquitin-like protein

scientific article

Protein assembly line components in prodigiosin biosynthesis: characterization of PigA,G,H,I,J.

scientific article published in October 2006

Proteomics

Protocol for community-created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure

scientific article published on 13 January 2020

Publisher Correction: Database-independent molecular formula annotation using Gibbs sampling through ZODIAC

correction of a scholarly article

Pumilacidins from the Octocoral-Associated sp. DT001 Display Anti-Proliferative Effects in ⬇️

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Qiita: rapid, web-enabled microbiome meta-analysis

scientific article published on 01 October 2018

Quantitative molecular networking to profile marine cyanobacterial metabolomes

scientific article (publication date: 2014)

Quick-start infrastructure for untargeted metabolomics analysis in GNPS

scientific article published in 2021

Ralstonia solanacearum lipopeptide induces chlamydospore development in fungi and facilitates bacterial entry into fungal tissues

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ReDU: a framework to find and reanalyze public mass spectrometry data

scientific article published on 17 August 2020

Real-time metabolomics on living microorganisms using ambient electrospray ionization flow-probe

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Reconstitution of a new cysteine biosynthetic pathway in Mycobacterium tuberculosis

scientific journal article

Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV

scientific article published in 2020

Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome

scientific article published on 20 February 2020

Reproducible Molecular Networking Of Untargeted Mass Spectrometry Data Using GNPS

scholarly article published 8 August 2019

Reproducible mass spectrometry data processing and compound annotation in MZmine 3

scientific article published on 20 May 2024

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

scientific article published on 13 May 2020

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Reverse metabolomics for the discovery of chemical structures from humans

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

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Role of secondary metabolites in the interaction between Pseudomonas fluorescens and soil microorganisms under iron-limited conditions

scientific article published on 18 May 2016

Ruminiclostridium 5, Parabacteroides distasonis, and bile acid profile are modulated by prebiotic diet and associate with facilitated sleep/clock realignment after chronic disruption of rhythms

scientific article published in 2021

SIMILE enables alignment of tandem mass spectra with statistical significance

scientific article published on 06 May 2022

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

scientific article published on 18 March 2019

SPLASH, a hashed identifier for mass spectra ⬇️

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Sa1915 – Altered Circadian Rhythm Cycling of Microbes and Metabolites in a Murine Model of Sleep Apnea

scholarly article

Saccharomyces cerevisiae THI4p is a suicide thiamine thiazole synthase ⬇️

scientific article published on October 26, 2011

Salivary bacterial signatures in depression-obesity comorbidity are associated with neurotransmitters and neuroactive dipeptides

scientific article published on 14 March 2022

Secondary metabolomics: natural products mass spectrometry goes global

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Sequencing cyclic peptides by multistage mass spectrometry ⬇️

scientific article published on August 9, 2011

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

scientific article (publication date: 9 August 2016)

Siderophore-mediated zinc acquisition enhances enterobacterial colonization of the inflamed gut

scientific article published in 2021

Significance estimation for large scale metabolomics annotations by spectral matching

scientific article published on 14 November 2017

Significant natural product biosynthetic potential of actinorhizal symbionts of the genus frankia, as revealed by comparative genomic and proteomic analyses.

scientific article

Simultaneous kinetic characterization of multiple protein forms by top down mass spectrometry

scientific article published in July 2005

Single Cell Genome Amplification Accelerates Identification of the Apratoxin Biosynthetic Pathway from a Complex Microbial Assemblage ⬇️

scientific article published on April 12, 2011

Spatial Molecular Architecture of the Microbial Community of a Peltigera Lichen

scientific article (publication date: 20 December 2016)

Spatial metabolomics identifies localized chemical changes in heart tissue during chronic cardiac Chagas Disease

scientific article published on 04 October 2021

Specialized Metabolites from Ribosome Engineered Strains of Streptomyces clavuligerus

scientific article published in 2021

Specialized metabolites from the microbiome in health and disease

scientific article

Spongosine production by a Vibrio harveyi strain associated with the sponge Tectitethya crypta. ⬇️

scientific article published on 10 February 2015

Structural and mechanistic studies on ThiO, a glycine oxidase essential for thiamin biosynthesis in Bacillus subtilis

scientific article (publication date: 18 March 2003)

Structure of oxalate decarboxylase from Bacillus subtilis at 1.75 A resolution

scientific article

Studying Charge Migration Fragmentation of Sodiated Precursor Ions in Collision-Induced Dissociation at the Library Scale

scientific article published on 13 November 2020

Substrate specificity of the adenylation enzyme SgcC1 involved in the biosynthesis of the enediyne antitumor antibiotic C-1027

scientific article published on 03 August 2006

Synergistic allelochemicals from a freshwater cyanobacterium ⬇️

scientific article

Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra

scientific article published on 23 November 2020

Tandem Mass Spectrometry Molecular Networking as a Powerful and Efficient Tool for Drug Metabolism Studies

scientific article published in 2022

Targeted Isolation of Neuroprotective Dicoumaroyl Neolignans and Lignans from Sageretia theezans Using in Silico Molecular Network Annotation Propagation-Based Dereplication

scientific article published on 14 August 2018

Targeted capture and heterologous expression of the Pseudoalteromonas alterochromide gene cluster in Escherichia coli represents a promising natural product exploratory platform ⬇️

scientific article published on 29 August 2014

Temporal dynamics of natural product biosynthesis in marine cyanobacteria

scientific article

The Bacillus subtilis cannibalism toxin SDP collapses the proton motive force and induces autolysis

scientific journal article

The Fecal Microbiome and Metabolome of Pitt Hopkins Syndrome, a Severe Autism Spectrum Disorder

scientific article published in 2021

The Host-Microbiome Response to Hyperbaric Oxygen Therapy in Ulcerative Colitis Patients

scientific article published on 01 April 2022

The Microbiome and Its Potential for Pharmacology

scientific article published on 01 January 2019

The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery

scientific article published on 14 November 2019

The WinCF Model - An Inexpensive and Tractable Microcosm of a Mucus Plugged Bronchiole to Study the Microbiology of Lung Infections

scientific article published on 8 May 2017

The bacterial chemical repertoire mediates metabolic exchange within gut microbiomes ⬇️

scientific article published on December 30, 2011

The bifunctional glyceryl transferase/phosphatase OzmB belonging to the HAD superfamily that diverts 1,3-bisphosphoglycerate into polyketide biosynthesis

scientific article published on 01 August 2006

The biosynthesis of the thiazole phosphate moiety of thiamin (vitamin B1): the early steps catalyzed by thiazole synthase

scientific article

The biosynthesis of the thiazole phosphate moiety of thiamin: the sulfur transfer mediated by the sulfur carrier protein ThiS.

scientific article

The emergence of microbiome centres

scientific article published on 01 January 2020

The evolving field of imaging mass spectrometry and its impact on future biological research.

scientific article published on 24 January 2011

The extracellular matrix protects Bacillus subtilis colonies from Pseudomonas invasion and modulates plant co-colonization

article

The impact of maternal asthma on the preterm infants' gut metabolome and microbiome (MAP study)

scientific article published in 2022

The impact of skin care products on skin chemistry and microbiome dynamics

scientific article published on 12 June 2019

The intestinal metabolome: an intersection between microbiota and host

scientific article

The medical threat of mamba envenoming in sub-Saharan Africa revealed by genus-wide analysis of venom composition, toxicity and antivenomics profiling of available antivenoms

scientific article published on 23 August 2017

The molecular impact of life in an indoor environment

scientific article published in 2022

The role of inter-species interactions in Salinispora specialized metabolism

scientific article published in 2018

The spectral networks paradigm in high throughput mass spectrometry ⬇️

scientific article published on October 1, 2012

Thiamin biosynthesis in Bacillus subtilis: structure of the thiazole synthase/sulfur carrier protein complex

scientific article

Thiopeptide antibiotics stimulate biofilm formation in Bacillus subtilis.

scientific article

Three Dimensional Cartography of Microbiome and Metabolome Data onto Radiological Images of the Human Lung

scientific article published in 2018

Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung

scientific article published on 17 October 2017

Three-Dimensional Molecular Cartography of the Caribbean Reef-Building Coral Orbicella faveolata

scientific article published on 01 April 2021

Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery

scientific article published in 2021

Titelbild: Connecting Chemotypes and Phenotypes of Cultured Marine Microbial Assemblages by Imaging Mass Spectrometry (Angew. Chem. 26/2011)

scientific article published on 11 May 2011

Tools for the Microbiome: Nano and Beyond

scientific article published on 22 December 2015

Top-Down Atmospheric Ionization Mass Spectrometry Microscopy Combined With Proteogenomics

scientific article published on 10 July 2017

Top-down mass spectrometry on low-resolution instruments: characterization of phosphopantetheinylated carrier domains in polyketide and non-ribosomal biosynthetic pathways

scientific article

Total Synthesis and Biological Assessment of Novel Albicidins Discovered by Mass Spectrometric Networking

scientific article published on 6 September 2017

Toward unrestricted use of public genomic data:

scientific article

Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma -derived metabolite cues

scientific article published on 13 November 2022

Trait-like vulnerability of higher-order cognition and ability to maintain wakefulness during combined sleep restriction and circadian misalignment

scientific article published on 01 August 2019

Transcriptional analysis of the jamaicamide gene cluster from the marine cyanobacterium Lyngbya majuscula and identification of possible regulatory proteins

scientific article

Transcriptomics-guided bottom-up and top-down venomics of neonate and adult specimens of the arboreal rear-fanged Brown Treesnake, Boiga irregularis, from Guam

scientific article published on 29 December 2017

Translating metabolic exchange with imaging mass spectrometry

scientific article

Tundrenone: An Atypical Secondary Metabolite from Bacteria with Highly Restricted Primary Metabolism. ⬇️

scientific article published on 23 January 2018

Underestimated biodiversity as a major explanation for the perceived rich secondary metabolite capacity of the cyanobacterial genus Lyngbya ⬇️

scientific article published on April 7, 2011

Unified and Standardized Mass Spectrometry Data Processing in Python Using spectrum_utils

scientific article published in 2023

Untargeted Mass Spectrometry-Based Metabolomics Tracks Molecular Changes in Raw and Processed Foods and Beverages

scientific article published on 15 June 2018

Untargeted Metabolomics Sheds Light on the Diversity of Major Classes of Secondary Metabolites in the Malpighiaceae Botanical Family

scientific article published on 14 April 2022

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

scientific article published on 30 July 2019

Viequeamide A, a Cytotoxic Member of the Kulolide Superfamily of Cyclic Depsipeptides from a Marine Button Cyanobacterium ⬇️

scientific article published on August 27, 2012

Virulence as a Side Effect of Interspecies Interaction in Vibrio Coral Pathogens

scientific article published on 21 July 2020

Viscosin-like lipopeptides from frog skin bacteria inhibit Aspergillus fumigatus and Batrachochytrium dendrobatidis detected by imaging mass spectrometry and molecular networking

scientific article published on 28 February 2019

Visualizing life with ambient mass spectrometry

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Visualizing the spatial distribution of secondary metabolites produced by marine cyanobacteria and sponges via MALDI-TOF imaging

scientific article

Vitroprocines, new antibiotics against Acinetobacter baumannii, discovered from marine Vibrio sp. QWI-06 using mass-spectrometry-based metabolomics approach ⬇️

scientific article published on 4 August 2015

ants promote fungus garden hygiene using -derived metabolite cues

scientific article published on 20 June 2023

foodMASST a mass spectrometry search tool for foods and beverages

scientific article published on 20 April 2022

microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data ⬇️

scientific article published in 2024

ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs

scientific article

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