List of works - Wiesław Babik

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

scientific article published on 17 March 2009

Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus

scientific article

454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher.

scientific article published on 31 December 2010

Methods for MHC genotyping in non‐model vertebrates

scientific article published on October 15, 2009

jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing.

scientific article

Detecting balancing selection in genomes: limits and prospects.

scientific article published on 15 June 2015

Interspecific hybridization increases MHC class II diversity in two sister species of newts

scientific article published on 9 November 2011

MHC diversity, malaria and lifetime reproductive success in collared flycatchers.

scientific article published on 18 April 2012

No evidence for nuclear introgression despite complete mtDNA replacement in the Carpathian newt (Lissotriton montandoni).

scientific article published on 4 February 2013

Divergence in the face of gene flow: the case of two newts (amphibia: salamandridae).

scientific article

Sequence diversity of the MHC DRB gene in the Eurasian beaver (Castor fiber).

scientific article

Nuclear and mitochondrial phylogeography of the European fire-bellied toads Bombina bombina and Bombina variegata supports their independent histories.

scientific article

Contrasting patterns of variation in MHC loci in the Alpine newt

scientific article

Phylogeography of the fire-bellied toads Bombina: independent Pleistocene histories inferred from mitochondrial genomes

scientific article

Accuracy of allele frequency estimation using pooled RNA-Seq

scientific article

Long-term survival of a urodele amphibian despite depleted major histocompatibility complex variation

scientific article

Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing.

scientific article published on 24 October 2011

Selective pressures on MHC class II genes in the guppy (Poecilia reticulata) as inferred by hierarchical analysis of population structure

scientific article published on 19 September 2014

MHC-DRB3 variation in a free-living population of the European bison, Bison bonasus

scientific article published on 01 February 2007

The genomics of adaptation

scientific article published on October 24, 2012

MHC allele frequency distributions under parasite-driven selection: A simulation model

scientific article published on October 27, 2010

Mitochondrial phylogeography of the Eurasian beaver Castor fiber L.

scientific article

Fungi from the roots of the common terrestrial orchid Gymnadenia conopsea.

scientific article

Does reduced MHC diversity decrease viability of vertebrate populations?

scientific article published on 11 September 2009

How sympatric is speciation in the Howea palms of Lord Howe Island?

scientific article published on 10 August 2009

Nuclear markers, mitochondrial DNA and male secondary sexual traits variation in a newt hybrid zone (Triturus vulgaris x T. montandoni)

scientific article published in 2003

Evolution of major histocompatibility complex class I and class II genes in the brown bear

scientific article

Development, validation and high-throughput analysis of sequence markers in nonmodel species.

scientific article

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

scientific article

Initial Molecular-Level Response to Artificial Selection for Increased Aerobic Metabolism Occurs Primarily through Changes in Gene Expression

scientific article published on March 3, 2015

Deeply divergent sympatric mitochondrial lineages of the earthworm Lumbricus rubellus are not reproductively isolated

scientific article published on 5 October 2015

Constraint and adaptation in newt toll-like receptor genes.

scientific article

Single nucleotide polymorphisms reveal genetic structuring of the carpathian newt and provide evidence of interspecific gene flow in the nuclear genome

scientific article (publication date: 2014)

Molecular Inversion Probes for targeted resequencing in non-model organisms

scientific article

Low Major Histocompatibility Complex Class I (MHC I) Variation in the European Bison (Bison bonasus)

scientific article published on 10 April 2012

The dissection of a Pleistocene refugium: phylogeography of the smooth newt,Lissotriton vulgaris, in the Balkans

Isolation and gene flow in a speciation continuum in newts.

scientific article

Parasite load and MHC diversity in undisturbed and agriculturally modified habitats of the ornate dragon lizard.

scientific article published on 24 November 2014

Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts

scientific article published in 2014

Genetic structure in northeastern populations of the Alpine newt (Triturus alpestris): evidence for post-Pleistocene differentiation.

scientific article

Strong genetic differentiation between Gymnadenia conopsea and G. densiflora despite morphological similarity

scientific article published in 2011

The crested newtTriturus cristatusrecolonized temperate Eurasia from an extra-Mediterranean glacial refugium

Genetic differentiation among northern and southern populations of the moor frog Rana arvalis Nilsson in central Europe

scientific article published on 01 May 2000

Biofilm feeding: Microbial colonization of food promotes the growth of a detritivorous arthropod

scientific article

Genomic Response to Selection for Predatory Behavior in a Mammalian Model of Adaptive Radiation.

scientific article published on 8 July 2016

Transcriptomics of Intralocus Sexual Conflict: Gene Expression Patterns in Females Change in Response to Selection on a Male Secondary Sexual Trait in the Bulb Mite

scientific article published on 10 July 2016

An evaluation of two potential risk factors, MHC diversity and host density, for infection by an invasive nematode Ashworthius sidemi in endangered European bison (Bison bonasus)

No evidence for the effect of MHC on male mating success in the brown bear

scientific article

Genome-wide genetic diversity of rove beetle populations along a metal pollution gradient

scientific article published on 16 May 2015

Effects of heterozygosity and MHC diversity on patterns of extra-pair paternity in the socially monogamous scarlet rosefinch

scientific article published in 2014

List of works by Wiesław Babik

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus

454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher.

Methods for MHC genotyping in non‐model vertebrates

jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing.

Detecting balancing selection in genomes: limits and prospects.

Interspecific hybridization increases MHC class II diversity in two sister species of newts

MHC diversity, malaria and lifetime reproductive success in collared flycatchers.

No evidence for nuclear introgression despite complete mtDNA replacement in the Carpathian newt (Lissotriton montandoni).

Divergence in the face of gene flow: the case of two newts (amphibia: salamandridae).

Sequence diversity of the MHC DRB gene in the Eurasian beaver (Castor fiber).

Nuclear and mitochondrial phylogeography of the European fire-bellied toads Bombina bombina and Bombina variegata supports their independent histories.

Contrasting patterns of variation in MHC loci in the Alpine newt

Phylogeography of the fire-bellied toads Bombina: independent Pleistocene histories inferred from mitochondrial genomes

Accuracy of allele frequency estimation using pooled RNA-Seq

Long-term survival of a urodele amphibian despite depleted major histocompatibility complex variation

Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing.

Selective pressures on MHC class II genes in the guppy (Poecilia reticulata) as inferred by hierarchical analysis of population structure

MHC-DRB3 variation in a free-living population of the European bison, Bison bonasus

The genomics of adaptation

MHC allele frequency distributions under parasite-driven selection: A simulation model

Mitochondrial phylogeography of the Eurasian beaver Castor fiber L.

Fungi from the roots of the common terrestrial orchid Gymnadenia conopsea.

Does reduced MHC diversity decrease viability of vertebrate populations?

How sympatric is speciation in the Howea palms of Lord Howe Island?

Nuclear markers, mitochondrial DNA and male secondary sexual traits variation in a newt hybrid zone (Triturus vulgaris x T. montandoni)

Evolution of major histocompatibility complex class I and class II genes in the brown bear

Development, validation and high-throughput analysis of sequence markers in nonmodel species.

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

Initial Molecular-Level Response to Artificial Selection for Increased Aerobic Metabolism Occurs Primarily through Changes in Gene Expression

Deeply divergent sympatric mitochondrial lineages of the earthworm Lumbricus rubellus are not reproductively isolated

Constraint and adaptation in newt toll-like receptor genes.

Single nucleotide polymorphisms reveal genetic structuring of the carpathian newt and provide evidence of interspecific gene flow in the nuclear genome

Molecular Inversion Probes for targeted resequencing in non-model organisms

Low Major Histocompatibility Complex Class I (MHC I) Variation in the European Bison (Bison bonasus)

The dissection of a Pleistocene refugium: phylogeography of the smooth newt,Lissotriton vulgaris, in the Balkans

Isolation and gene flow in a speciation continuum in newts.

Parasite load and MHC diversity in undisturbed and agriculturally modified habitats of the ornate dragon lizard.

Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts

Genetic structure in northeastern populations of the Alpine newt (Triturus alpestris): evidence for post-Pleistocene differentiation.

Strong genetic differentiation between Gymnadenia conopsea and G. densiflora despite morphological similarity

The crested newtTriturus cristatusrecolonized temperate Eurasia from an extra-Mediterranean glacial refugium

Genetic differentiation among northern and southern populations of the moor frog Rana arvalis Nilsson in central Europe

Biofilm feeding: Microbial colonization of food promotes the growth of a detritivorous arthropod

Genomic Response to Selection for Predatory Behavior in a Mammalian Model of Adaptive Radiation.

Transcriptomics of Intralocus Sexual Conflict: Gene Expression Patterns in Females Change in Response to Selection on a Male Secondary Sexual Trait in the Bulb Mite

An evaluation of two potential risk factors, MHC diversity and host density, for infection by an invasive nematode Ashworthius sidemi in endangered European bison (Bison bonasus)

No evidence for the effect of MHC on male mating success in the brown bear

Genome-wide genetic diversity of rove beetle populations along a metal pollution gradient

Effects of heterozygosity and MHC diversity on patterns of extra-pair paternity in the socially monogamous scarlet rosefinch