List of works - Wiesław Babik

454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher.

scientific article published on 31 December 2010

A combination of techniques proves useful in the development of nuclear markers in the newt genus Triturus

scientific article

A three-marker DNA barcoding approach for ecological studies of xerothermic plants and herbivorous insects from central Europe

article

Accuracy of allele frequency estimation using pooled RNA-Seq

scientific article

Admixture of two phylogeographic lineages of the Eurasian beaver in Poland

article

Advances in the Evolutionary Understanding of MHC Polymorphism

scientific article published on 07 February 2020

Alternative reproductive tactics and sex-biased gene expression: the study of the bulb mite transcriptome

article

An evaluation of two potential risk factors, MHC diversity and host density, for infection by an invasive nematode Ashworthius sidemi in endangered European bison (Bison bonasus)

Balancing selection and introgression of newt immune-response genes

article

Balancing selection versus allele and supertype turnover in MHC class II genes in guppies

scientific article published on 28 September 2020

Biofilm feeding: Microbial colonization of food promotes the growth of a detritivorous arthropod

scientific article

Coevolution between MHC Class I and Antigen-Processing Genes in Salamanders

scientific article published on 10 August 2021

Conservation units in north-eastern populations of the Alpine newt (Triturus alpestris)

Constraint and adaptation in newt toll-like receptor genes.

scientific article

Contrasting patterns of variation in MHC loci in the Alpine newt

scientific article

Correction to: Balancing selection versus allele and supertype turnover in MHC class II genes in guppies

scientific article published in March 2021

Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts

scientific article published in 2014

Deeply divergent sympatric mitochondrial lineages of the earthworm Lumbricus rubellus are not reproductively isolated

scientific article published on 5 October 2015

Detecting balancing selection in genomes: limits and prospects.

scientific article published on 15 June 2015

Development and characterization of microsatellite loci in the Centricnemus leucogrammus weevil

scientific article

Development, validation and high-throughput analysis of sequence markers in nonmodel species.

scientific article

Differential introgression across newt hybrid zones: Evidence from replicated transects

scientific article published on 20 October 2019

Divergence history of the Carpathian and smooth newts modelled in space and time

scientific article published on 11 June 2016

Divergence in the face of gene flow: the case of two newts (amphibia: salamandridae).

scientific article

Does reduced MHC diversity decrease viability of vertebrate populations?

scientific article published on 11 September 2009

Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus

scientific article

Effects of heterozygosity and MHC diversity on patterns of extra-pair paternity in the socially monogamous scarlet rosefinch

scientific article published in 2014

Erratum to: Molecular evolution of antigen processing genes in salamanders: do they coevolve with MHC class I genes?

scientific article published in April 2021

Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing.

scientific article published on 24 October 2011

Evolution of major histocompatibility complex class I and class II genes in the brown bear

scientific article

Evolutionary principles guiding amphibian conservation

scientific article published on 13 March 2020

Evolutionary units ofCoraebus elatus(Coleoptera: Buprestidae) in central and eastern Europe - implications for origin and conservation

Fungi from the roots of the common terrestrial orchid Gymnadenia conopsea.

scientific article

Genetic differentiation among northern and southern populations of the moor frog Rana arvalis Nilsson in central Europe

scientific article published on 01 May 2000

Genetic drift shaped MHC IIB diversity of an endangered anuran species within the Italian glacial refugium

scientific article published on 28 September 2018

Genetic structure and differentiation of the fire salamander Salamandra salamandra at the northern margin of its range in the Carpathians

Genetic structure in northeastern populations of the Alpine newt (Triturus alpestris): evidence for post-Pleistocene differentiation.

scientific article

Genetic structure of the fire salamander Salamandra salamandra in the Polish Sudetes

Genome-wide genetic diversity of rove beetle populations along a metal pollution gradient

scientific article published on 16 May 2015

Genomic Response to Selection for Predatory Behavior in a Mammalian Model of Adaptive Radiation.

scientific article published on 8 July 2016

Genomic evidence that a sexually selected trait captures genome-wide variation and facilitates the purging of genetic load

scientific article published in 2022

Genomic heterogeneity of historical gene flow between two species of newts inferred from transcriptome data.

scientific article

Genomics of end-Pleistocene population replacement in a small mammal.

scientific article published in February 2018

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

scientific article

How sympatric is speciation in the Howea palms of Lord Howe Island?

scientific article published on 10 August 2009

Initial Molecular-Level Response to Artificial Selection for Increased Aerobic Metabolism Occurs Primarily through Changes in Gene Expression.

scientific article published on 3 March 2015

Interspecific hybridization increases MHC class II diversity in two sister species of newts

scientific article published on 9 November 2011

Intrageneric predation in larval newts (Triturus, Salamandridae, Urodela)

Isolation and gene flow in a speciation continuum in newts.

scientific article

Knowledge Representation in Map Collections for Information Retrieval Systems

scientific article published on 14 April 1999

Landscape genetics reveals contrasting patterns of connectivity in two newt species ( Lissotriton montandoni and L. vulgaris )

scientific article published on 20 May 2022

Linkage Map of Lissotriton Newts Provides Insight into the Genetic Basis of Reproductive Isolation

scientific article

Long-term survival of a urodele amphibian despite depleted major histocompatibility complex variation

scientific article

Low Major Histocompatibility Complex Class I (MHC I) Variation in the European Bison (Bison bonasus)

scientific article published on 10 April 2012

Low effective population sizes and limited connectivity in xerothermic beetles: implications for the conservation of an endangered habitat

MHC allele frequency distributions under parasite-driven selection: A simulation model ⬇️

scientific article published on October 27, 2010

MHC diversity, malaria and lifetime reproductive success in collared flycatchers.

scientific article published on 18 April 2012

MHC structuring and divergent allele advantage in a urodele amphibian: a hierarchical multi-scale approach

scientific article published on 29 April 2019

MHC-DRB3 variation in a free-living population of the European bison, Bison bonasus

scientific article published on 01 February 2007

Massive introgression of major histocompatibility complex (MHC) genes in newt hybrid zones

scientific article published on 21 October 2019

Methods for MHC genotyping in non-model vertebrates

scientific article published on 15 October 2009

Mitochondrial phylogeography of the Eurasian beaver Castor fiber L.

scientific article

Molecular Evolution of Antigen-Processing Genes in Salamanders: Do They Coevolve with MHC Class I Genes?

scientific article published on 3 February 2021

Molecular Inversion Probes for targeted resequencing in non-model organisms

scientific article

Morphology is a poor predictor of interspecific admixture – the case of two naturally hybridizing newts Lissotriton montandoni and Lissotriton vulgaris (Caudata: Salamandridae)

scientific article published on 3 June 2020

Morphometric differentiation of the moor frog (Rana arvalis Nilss.) in Central Europe

scientific article published in 2000

Navigating the temporal continuum of effective population size

scientific article published on 30 October 2021

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

scientific article published on 17 March 2009

Next-generation phylogeography of the banded newts (Ommatotriton): A phylogenetic hypothesis for three ancient species with geographically restricted interspecific gene flow and deep intraspecific genetic structure

scholarly article published in 2022

No evidence for nuclear introgression despite complete mtDNA replacement in the Carpathian newt (Lissotriton montandoni).

scientific article published on 4 February 2013

No evidence for the effect of MHC on male mating success in the brown bear

scientific article

Nuclear and mitochondrial phylogeography of the European fire-bellied toads Bombina bombina and Bombina variegata supports their independent histories.

scientific article

Nuclear markers, mitochondrial DNA and male secondary sexual traits variation in a newt hybrid zone (Triturus vulgaris x T. montandoni)

scientific article published in 2003

Parasite load and MHC diversity in undisturbed and agriculturally modified habitats of the ornate dragon lizard.

scientific article published on 24 November 2014

Past forest cover explains current genetic differentiation in the Carpathian newt (<i>Lissotriton montandoni</i>), but not in the smooth newt (<i>L. vulgaris</i>)

scientific article published in 2023

Pervasive introgression of MHC genes in newt hybrid zones

scientific article published on 19 July 2019

Phylogeography of the fire-bellied toads Bombina: independent Pleistocene histories inferred from mitochondrial genomes

scientific article

Phylotranscriptomic evidence for pervasive ancient hybridization among Old World salamanders

scientific article published on 05 October 2020

Plant-herbivorous beetle networks: molecular characterization of trophic ecology within a threatened steppic environment

scientific article published on 17 July 2015

Population structure of guppies in north-eastern Venezuela, the area of putative incipient speciation.

scientific article

Relationship between morphometric and genetic variation in pure and hybrid populations of the smooth and Montandons newt (Triturus vulgaris and T. montandoni)

scientific article published in 2004

Retracted: Heterozygosity, sexual ornament and body size in the crested newt

retracted paper

Salamanders reveal novel trajectories of amphibian MHC evolution

scientific article published in 2022

Selective Landscapes in newt Immune Genes Inferred from Patterns of Nucleotide Variation

scientific article published on 04 October 2016

Selective pressures on MHC class II genes in the guppy (Poecilia reticulata) as inferred by hierarchical analysis of population structure

scientific article published on 19 September 2014

Sequence diversity of MHC class II DRB genes in the bank voleMyodes glareolus

scientific article published in September 2007

Sequence diversity of the MHC DRB gene in the Eurasian beaver (Castor fiber).

scientific article

Single nucleotide polymorphisms reveal genetic structuring of the carpathian newt and provide evidence of interspecific gene flow in the nuclear genome

scientific article (publication date: 2014)

Strong genetic differentiation between Gymnadenia conopsea and G. densiflora despite morphological similarity

scientific article published in 2011

The Carpathians hosted extra-Mediterranean refugia-within-refugia during the Pleistocene Ice Age: genomic evidence from two newt genera

article

The crested newtTriturus cristatusrecolonized temperate Eurasia from an extra-Mediterranean glacial refugium

The dissection of a Pleistocene refugium: phylogeography of the smooth newt,Lissotriton vulgaris, in the Balkans

The distributions of the six species constituting the smooth newt species complex (Lissotriton vulgaris sensu lato and L. montandoni) – an addition to the New Atlas of Amphibians and Reptiles of Europe

The effect of temperature and invasive alien predator on genetic and phenotypic variation in the damselfly Ischnura elegans: cross-latitude comparison

scientific article published in 2023

The genomics of adaptation.

scientific article published on 24 October 2012

The role of MHC supertypes in promoting trans-species polymorphism remains an open question

scientific article published in Nature Communications

Transcriptomics of Intralocus Sexual Conflict: Gene Expression Patterns in Females Change in Response to Selection on a Male Secondary Sexual Trait in the Bulb Mite

scientific article published on 10 July 2016

Vanishing benefits - The loss of actinobacterial symbionts at elevated temperatures

scientific article published on 03 May 2019

jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing.

scientific article

List of works by Wiesław Babik

454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher.

A combination of techniques proves useful in the development of nuclear markers in the newt genus Triturus

A three-marker DNA barcoding approach for ecological studies of xerothermic plants and herbivorous insects from central Europe

Accuracy of allele frequency estimation using pooled RNA-Seq

Admixture of two phylogeographic lineages of the Eurasian beaver in Poland

Advances in the Evolutionary Understanding of MHC Polymorphism

Alternative reproductive tactics and sex-biased gene expression: the study of the bulb mite transcriptome

An evaluation of two potential risk factors, MHC diversity and host density, for infection by an invasive nematode Ashworthius sidemi in endangered European bison (Bison bonasus)

Balancing selection and introgression of newt immune-response genes

Balancing selection versus allele and supertype turnover in MHC class II genes in guppies

Biofilm feeding: Microbial colonization of food promotes the growth of a detritivorous arthropod

Coevolution between MHC Class I and Antigen-Processing Genes in Salamanders

Conservation units in north-eastern populations of the Alpine newt (Triturus alpestris)

Constraint and adaptation in newt toll-like receptor genes.

Contrasting patterns of variation in MHC loci in the Alpine newt

Correction to: Balancing selection versus allele and supertype turnover in MHC class II genes in guppies

Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts

Deeply divergent sympatric mitochondrial lineages of the earthworm Lumbricus rubellus are not reproductively isolated

Detecting balancing selection in genomes: limits and prospects.

Development and characterization of microsatellite loci in the Centricnemus leucogrammus weevil

Development, validation and high-throughput analysis of sequence markers in nonmodel species.

Differential introgression across newt hybrid zones: Evidence from replicated transects

Divergence history of the Carpathian and smooth newts modelled in space and time

Divergence in the face of gene flow: the case of two newts (amphibia: salamandridae).

Does reduced MHC diversity decrease viability of vertebrate populations?

Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus

Effects of heterozygosity and MHC diversity on patterns of extra-pair paternity in the socially monogamous scarlet rosefinch

Erratum to: Molecular evolution of antigen processing genes in salamanders: do they coevolve with MHC class I genes?

Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing.

Evolution of major histocompatibility complex class I and class II genes in the brown bear

Evolutionary principles guiding amphibian conservation

Evolutionary units ofCoraebus elatus(Coleoptera: Buprestidae) in central and eastern Europe - implications for origin and conservation

Fungi from the roots of the common terrestrial orchid Gymnadenia conopsea.

Genetic differentiation among northern and southern populations of the moor frog Rana arvalis Nilsson in central Europe

Genetic drift shaped MHC IIB diversity of an endangered anuran species within the Italian glacial refugium

Genetic structure and differentiation of the fire salamander Salamandra salamandra at the northern margin of its range in the Carpathians

Genetic structure in northeastern populations of the Alpine newt (Triturus alpestris): evidence for post-Pleistocene differentiation.

Genetic structure of the fire salamander Salamandra salamandra in the Polish Sudetes

Genome-wide genetic diversity of rove beetle populations along a metal pollution gradient

Genomic Response to Selection for Predatory Behavior in a Mammalian Model of Adaptive Radiation.

Genomic evidence that a sexually selected trait captures genome-wide variation and facilitates the purging of genetic load

Genomic heterogeneity of historical gene flow between two species of newts inferred from transcriptome data.

Genomics of end-Pleistocene population replacement in a small mammal.

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

How sympatric is speciation in the Howea palms of Lord Howe Island?

Initial Molecular-Level Response to Artificial Selection for Increased Aerobic Metabolism Occurs Primarily through Changes in Gene Expression.

Interspecific hybridization increases MHC class II diversity in two sister species of newts

Intrageneric predation in larval newts (Triturus, Salamandridae, Urodela)

Isolation and gene flow in a speciation continuum in newts.

Knowledge Representation in Map Collections for Information Retrieval Systems

Landscape genetics reveals contrasting patterns of connectivity in two newt species ( Lissotriton montandoni and L. vulgaris )

Linkage Map of Lissotriton Newts Provides Insight into the Genetic Basis of Reproductive Isolation

Long-term survival of a urodele amphibian despite depleted major histocompatibility complex variation

Low Major Histocompatibility Complex Class I (MHC I) Variation in the European Bison (Bison bonasus)

Low effective population sizes and limited connectivity in xerothermic beetles: implications for the conservation of an endangered habitat

MHC allele frequency distributions under parasite-driven selection: A simulation model ⬇️

MHC diversity, malaria and lifetime reproductive success in collared flycatchers.

MHC structuring and divergent allele advantage in a urodele amphibian: a hierarchical multi-scale approach

MHC-DRB3 variation in a free-living population of the European bison, Bison bonasus

Massive introgression of major histocompatibility complex (MHC) genes in newt hybrid zones

Methods for MHC genotyping in non-model vertebrates

Mitochondrial phylogeography of the Eurasian beaver Castor fiber L.

Molecular Evolution of Antigen-Processing Genes in Salamanders: Do They Coevolve with MHC Class I Genes?

Molecular Inversion Probes for targeted resequencing in non-model organisms

Morphology is a poor predictor of interspecific admixture – the case of two naturally hybridizing newts Lissotriton montandoni and Lissotriton vulgaris (Caudata: Salamandridae)

Morphometric differentiation of the moor frog (Rana arvalis Nilss.) in Central Europe

Navigating the temporal continuum of effective population size

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

Next-generation phylogeography of the banded newts (Ommatotriton): A phylogenetic hypothesis for three ancient species with geographically restricted interspecific gene flow and deep intraspecific genetic structure

No evidence for nuclear introgression despite complete mtDNA replacement in the Carpathian newt (Lissotriton montandoni).

No evidence for the effect of MHC on male mating success in the brown bear

Nuclear and mitochondrial phylogeography of the European fire-bellied toads Bombina bombina and Bombina variegata supports their independent histories.

Nuclear markers, mitochondrial DNA and male secondary sexual traits variation in a newt hybrid zone (Triturus vulgaris x T. montandoni)

Parasite load and MHC diversity in undisturbed and agriculturally modified habitats of the ornate dragon lizard.

Past forest cover explains current genetic differentiation in the Carpathian newt (<i>Lissotriton montandoni</i>), but not in the smooth newt (<i>L. vulgaris</i>)

Pervasive introgression of MHC genes in newt hybrid zones

Phylogeography of the fire-bellied toads Bombina: independent Pleistocene histories inferred from mitochondrial genomes

Phylotranscriptomic evidence for pervasive ancient hybridization among Old World salamanders

Plant-herbivorous beetle networks: molecular characterization of trophic ecology within a threatened steppic environment