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List of works by Amadou Alpha Sall

2018 Ebola virus disease outbreak in Équateur Province, Democratic Republic of the Congo: a retrospective genomic characterisation

scientific article published on 15 April 2019

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

scientific article published on 04 September 2020

A Field-Deployable Reverse Transcription Recombinase Polymerase Amplification Assay for Rapid Detection of the Chikungunya Virus

scientific article (publication date: September 2016)

A molecular survey of acute febrile illnesses reveals Plasmodium vivax infections in Kedougou, southeastern Senegal

scientific article published on 19 July 2015

Aedes aegypti in Senegal: genetic diversity and genetic structure of domestic and sylvatic populations.

scientific article

Aflatoxin contamination level in artisanal and industrial peanut butter food in Dakar (Senegal)

scientific article

African and Asian Zika virus strains differentially induce early antiviral responses in primary human astrocytes

scientific article

Alloreactivity and association of human natural killer cells with the major histocompatibility complex.

scientific article published on March 1999

Amplification of the sylvatic cycle of dengue virus type 2, Senegal, 1999-2000: entomologic findings and epidemiologic considerations

scientific article

Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses

scientific article

Asymptomatic infections among Duffy-negative population in Kedougou, Senegal

scientific article published on 29 December 2018

Autochthonous Japanese Encephalitis with Yellow Fever Coinfection in Africa

scientific article published in April 2017

Biodiversity Pattern of Mosquitoes in Southeastern Senegal, Epidemiological Implication in Arbovirus and Malaria Transmission

scientific article published on 01 February 2019

Biological Characteristics and Patterns of Codon Usage Evolution for the African Genotype Zika Virus

scientific article published on 14 November 2020

Biological and Phylogenetic Characteristics of Yellow Fever Virus Lineages from West Africa ⬇️

scientific article published on December 26, 2012

Biological and phylogenetic characteristics of West African lineages of West Nile virus

scientific article published on 8 November 2017

Biosafety standards for working with Crimean-Congo hemorrhagic fever virus

scientific article published on 21 September 2016

Bloodfeeding patterns of sylvatic arbovirus vectors in southeastern Senegal

scientific article

COVID-19 Outbreak, Senegal, 2020

scientific article published on 15 October 2020

COVID-19 testing in Africa: lessons learnt

scientific article published on 03 July 2020

COVID-19: towards controlling of a pandemic

scientific article published on 17 March 2020

Cardiovascular screening in low-income settings using a novel 4-lead smartphone-based electrocardiograph (D-Heart®).

scientific article

Chains of transmission and control of Ebola virus disease in Conakry, Guinea, in 2014: an observational study

scientific article

Changes in the Transmission Dynamic of Chikungunya Virus in Southeastern Senegal

scientific article published on 10 February 2020

Chikungunya Outbreak in Kedougou, Southeastern Senegal in 2009-2010.

scientific article published on 2 December 2017

Clarifying Bunyamwera virus riddles of the past

scientific article published on 18 May 2013

Clinical presentation of patients with Ebola virus disease in Conakry, Guinea

scientific article published on 5 November 2014

Combination random isothermal amplification and nanopore sequencing for rapid identification of the causative agent of an outbreak

scholarly article by Sören Hansen published in September 2018

Comparative Analysis of Zika Virus Detection by RT-qPCR, RT-LAMP, and RT-RPA

scientific article published on 01 January 2020

Comparative full length genome sequence analysis of Usutu virus isolates from Africa

scientific article

Complete genomic sequence and phylogenetic relatedness of hepatitis B virus isolates in Cambodia

scientific article published on 9 February 2008

Complete sequence of two tick-borne flaviviruses isolated from Siberia and the UK: analysis and significance of the 5' and 3'-UTRs

scientific article published on May 1997

Concurrent malaria and arbovirus infections in Kedougou, southeastern Senegal

scientific article

Correction for Okabayashi et al., Detection of Chikungunya Virus Antigen by a Novel Rapid Immunochromatographic Test

scientific article published on April 2016

Correction: Synonymous Mutations in the Core Gene Are Linked to Unusual Serological Profile in Hepatitis C Virus Infection.

scientific article published on 13 January 2011

Customized online and onsite training for rabies-control officers

scientific article published on 27 April 2015

Dengue Epidemic in Touba, Senegal: Implications for the Grand Magal Pilgrimage for Travelers

scientific article published on 01 October 2019

Dengue emergence and adaptation to peridomestic mosquitoes

scientific article published in October 2004

Dengue expansion in Africa-not recognized or not happening?

scientific article published in October 2014

Detection in and circulation of Bluetongue virus among domestic ruminants in Madagascar

scientific article published on 18 February 2015

Detection of Crimean Congo haemorrhagic fever virus in North-eastern Senegal, Bokidiawé 2019

scientific article published on 09 November 2020

Detection of chikungunya virus antigen by a novel rapid immunochromatographic test

scientific article

Detection of dengue virus in ten minutes using reverse transcription recombinase polymerase amplification assay

article published in 2014

Detection of the Northeastern African Rift Valley Fever Virus Lineage During the 2015 Outbreak in Mauritania

scientific article

Development and Validation of Real-Time RT-LAMP Assays for the Specific Detection of Zika Virus

scientific article published on 01 January 2020

Development and deployment of a rapid recombinase polymerase amplification Ebola virus detection assay in Guinea in 2015.

scientific article published in November 2015

Development and validation of four one-step real-time RT-LAMP assays for specific detection of each dengue virus serotype.

scientific article

Development and validation of sensitive real-time RT-PCR assay for broad detection of rabies virus

scientific article published on 4 February 2017

Development of a Usutu virus specific real-time reverse transcription PCR assay based on sequenced strains from Africa and Europe

scientific article

Development of a single-tube one-step RT-LAMP assay to detect the Chikungunya virus genome.

scientific article published on 29 May 2018

Development of mobile laboratory for viral haemorrhagic fever detection in Africa

article

Development of one-step quantitative reverse transcription PCR for the rapid detection of flaviviruses

scientific article

Development, validation and clinical evaluation of a broad-range pan-filovirus RT-qPCR

article

Diagnosing Zika virus infection against a background of other flaviviruses: Studies in high resolution serological analysis

scholarly article by Sören Hansen et al published 6 March 2019 in Scientific Reports

Diagnostic and evolutionary aspects of hemorrhagic syndromes of the newborn in Dakar ⬇️

scientific article published on December 14, 2012

Dianke virus: A new mesonivirus species isolated from mosquitoes in Eastern Senegal

scientific article published on 04 November 2019

Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic

scientific article

Domestic transmission of Rift Valley Fever virus in Diawara (Senegal) in 1998.

scientific article

Ebola Virus Imported from Guinea to Senegal, 2014.

scientific article

Ebola Virus Persistence in Breast Milk After No Reported Illness: A Likely Source of Virus Transmission From Mother to Child

scientific article

Ecological niche modeling of Aedes mosquito vectors of chikungunya virus in southeastern Senegal

scientific article published on 19 April 2018

Efficacy and Safety of Manual Partial Red Cell Exchange in the Management of Severe Complications of Sickle Cell Disease in a Developing Country.

scientific article

Eliminating yellow fever epidemics in Africa: Vaccine demand forecast and impact modelling

scientific article published on 07 May 2020

Emergence of Wesselsbron virus among black rat and humans in Eastern Senegal in 2013

scientific article

Enhanced Zika virus susceptibility of globally invasive Aedes aegypti populations

scientific article published on 01 November 2020

Environmental risk factors of West Nile virus infection of horses in the Senegal River basin

scientific article published on 23 February 2010

Evaluation of Convalescent Plasma for Ebola Virus Disease in Guinea

scientific article published on January 2016

Evaluation of the efficacy of medical screening of blood donors on preventing blood transfusion-transmitted infectious agents

scientific article published on 8 December 2015

Evaluation of the efficiency of bird-baited traps for sampling potential West Nile fever mosquito vectors (Diptera: Culicidae) in Senegal

scientific article published on June 2010

Evaluation of transfusion practices in sickle cell disease in Senegal: cohort study of 1078 patients with sickle cell disease

scientific article published in November 2017

Evidence of West Nile virus circulation among humans in central northern Algeria

scholarly article by A Hachid et al published May 2019 in New microbes and new infections

Evidence of pre-existing active Zika virus circulation in Sudan prior to 2012

article

Evolutionary history and dynamics of dog rabies virus in western and central Africa

scientific article

Evolutionary processes among sylvatic dengue type 2 viruses

scientific article

Field evaluation of a mobile biosafety laboratory in Senegal to strengthen rapid disease outbreak response and monitoring

scientific article published on 20 August 2020

First International External Quality Assessment Study on Molecular and Serological Methods for Yellow Fever Diagnosis ⬇️

scientific article published on May 3, 2012

Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil

scientific article (publication date: October 2016)

Full-Genome Characterization and Genetic Evolution of West African Isolates of Bagaza Virus

scientific article published on 13 April 2018

Full-length genome sequence of Ntaya virus

scientific article published on 21 September 2012

Genetic and phenotypic characterization of sylvatic dengue virus type 2 strains

scientific article published on August 2008

Genetic diversity of Plasmodium falciparum isolates from concurrent malaria and arbovirus co-infections in Kedougou, southeastern Senegal

scientific article

Genetic reassortment of Rift Valley fever virus in nature

scientific article

Genome-Scale Phylogenetic Analyses of Chikungunya Virus Reveal Independent Emergences of Recent Epidemics and Various Evolutionary Rates

scientific article published on 6 May 2011

Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates

scientific article published on 21 April 2010

Genomic Epidemiology of 2015-2016 Zika Virus Outbreak in Cape Verde

scientific article published on 01 June 2020

Genomic characterisation of human monkeypox virus in Nigeria

scientific article published on 17 January 2018

GloPID-R report on chikungunya, o'nyong-nyong and Mayaro virus, part 2: Epidemiological distribution of o'nyong-nyong virus

scientific article published on 20 September 2019

Human Adaptation of Ebola Virus during the West African Outbreak

scientific article

ICTV Virus Taxonomy Profile: Nairoviridae

scientific article published on 24 August 2020

IgG Seroconversion and Pathophysiology in Severe Acute Respiratory Syndrome Coronavirus 2 Infection

scientific article published on 30 November 2020

Immunogenicity and safety of yellow fever vaccine among 115 HIV-infected patients after a preventive immunisation campaign in Mali ⬇️

scientific article published on May 22, 2012

Immunosuppression and GB virus C-RNA detection among HIV-infected patients in Cambodia

scientific article published in May 2006

Impact of climate and mosquito vector abundance on sylvatic arbovirus circulation dynamics in Senegal

scientific article

Impact of genetic diversity on biological characteristics of Usutu virus strains in Africa

scientific article published on 12 September 2019

Improved LNA probe-based assay for the detection of African and South American yellow fever virus strains

scientific article

Improved Molecular Detection of Dengue Virus Serotype 1 Variants

scientific article

Internally Controlled, Multiplex Real-Time Reverse Transcription PCR for Dengue Virus and Yellow Fever Virus Detection

scientific article

Landscape ecology of sylvatic chikungunya virus and mosquito vectors in southeastern Senegal

scientific article

Larval ecology of mosquitoes in sylvatic arbovirus foci in southeastern Senegal

scientific article published on 7 December 2012

Living with the COVID-19 pandemic: act now with the tools we have

scientific article published on 08 October 2020

Magnetic colloids for the generic capture of viruses.

scientific article

Medical countermeasures during the 2018 Ebola virus disease outbreak in the North Kivu and Ituri Provinces of the Democratic Republic of the Congo: a rapid genomic assessment

scientific article published on 15 April 2019

Mitochondrial markers for molecular identification of Aedes mosquitoes (Diptera: Culicidae) involved in transmission of arboviral disease in West Africa

scientific article published on January 2005

Mobile Laboratory Reveals the Circulation of Dengue Virus Serotype I of Asian Origin in Medina Gounass (Guediawaye), Senegal

scientific article published on 16 June 2020

Mobile deployment of recombinase polymerase amplification based rapid diagnostics for Ebola virus disease in Guinea in 2015

Molecular diagnosis of haemophilia A in patients from Senegal.

scientific article published on 17 March 2017

Molecular evolution of Zika virus during its emergence in the 20(th) century

scientific article

Molecular evolution of Zika virus, an neglected emerging disease in Africa and Asia

article

Multinomial Logistic Model for Coinfection Diagnosis Between Arbovirus and Malaria in Kedougou

scientific article published on 27 August 2019

NS1 codon usage adaptation to humans in pandemic Zika virus

scientific article published on 10 May 2018

Need for sustainable biobanking networks for COVID-19 and other diseases of epidemic potential

scientific article published on 24 July 2020

Observational study on immune response to yellow fever and measles vaccines in 9 to 15-month old children. Is it necessary to wait 4 weeks between two live attenuated vaccines?

scientific article

One-step RT-PCR for detection of Zika virus

Scientific paper published in Journal of Clinical Virology

Oral susceptibility of Aedes aegypti (Diptera: Culicidae) from Senegal for dengue serotypes 1 and 3 viruses

scientific article published on 19 August 2014

Origin and Spread of the Dengue Virus Type 1, Genotype V in Senegal, 2015-2019

scientific article published on 04 January 2021

Origin of 1997-98 Rift Valley fever outbreak in East Africa

scientific article published in The Lancet

Partial molecular characterization of alphaherpesviruses isolated from tropical bats

scientific article

Pathogenicity evaluation of twelve West Nile virus strains belonging to four lineages from five continents in a mouse model: discrimination between three pathogenicity categories.

scientific article published on April 2017

Patterns of a sylvatic yellow fever virus amplification in southeastern Senegal, 2010.

scientific article

Phylodynamics, vectorial competence and genetic diversity of West Nile virus in Africa: implications for global emergence of West Nile

scientific article

Phylogenetic relationships of flaviviruses correlate with their epidemiology, disease association and biogeography

scientific article published on August 2001

Phylogeography of Rift Valley Fever Virus in Africa Reveals Multiple Introductions in Senegal and Mauritania ⬇️

scientific article published on April 23, 2012

Potential for Zika Virus to Establish a Sylvatic Transmission Cycle in the Americas

scientific article

Potential of selected Senegalese Aedes spp. mosquitoes (Diptera: Culicidae) to transmit Zika virus

scientific article

Potential role of sylvatic and domestic African mosquito species in dengue emergence.

scientific article

Preparedness is essential for malaria-endemic regions during the COVID-19 pandemic

scientific article published on 17 March 2020

Production and characterization of mouse monoclonal antibodies reactive to Chikungunya envelope E2 glycoprotein

scientific article

Prophylactic platelets in dengue: survey responses highlight lack of an evidence base

scientific article

Quantitative analysis of particles, genomes and infectious particles in supernatants of haemorrhagic fever virus cell cultures

scientific article published on 24 February 2011

Quantitative real-time PCR detection of Zika virus and evaluation with field-caught mosquitoes

2013 scientific article

RNA Interference Restricts Rift Valley Fever Virus in Multiple Insect Systems

scientific article

Rapid Molecular Detection of Zika Virus in Acute-Phase Urine Samples Using the Recombinase Polymerase Amplification Assay

scientific article

Rapid detection of important human pathogenic Phleboviruses

scientific article

Rapid development of COVID-19 rapid diagnostics for low resource settings: accelerating delivery through transparency, responsiveness, and open collaboration

scientific article published on 05 May 2020

Rapid molecular assays for the detection of yellow fever virus in low-resource settings

scientific article

Rapid molecular detection of Zika virus in urine using the recombinase polymerase amplification assay

scholarly article published 3 October 2016

Re-emergence of Rift Valley fever virus in Barkedji (Senegal, West Africa) in 2002-2003: identification of new vectors and epidemiological implications

scientific article published on September 2012

Real-Time RT-PCR Assays for Detection and Genotyping of West Nile Virus Lineages Circulating in Africa

scientific article published on 06 October 2016

Real-time, portable genome sequencing for Ebola surveillance

scientific article

Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments

scientific article published on 23 June 2015

Recombinase Polymerase Amplification Assay for Rapid Diagnostics of Dengue Infection

scientific article

Recombinase polymerase amplification assay for rapid detection of Monkeypox virus

scientific article published on 11 April 2019

Reemergence of Human Monkeypox in Nigeria, 2017.

scientific article

Reemergence of Rift Valley fever, Mauritania, 2010.

scientific article published on February 2014

Reemergence of yellow fever in Ethiopia after 50 years, 2013: epidemiological and entomological investigations

scientific article (publication date: 15 May 2017)

Repurposing Antimalarials to Tackle the COVID-19 Pandemic

scientific article published on 19 October 2020

Residual risk of transmission of HIV and HBV, in Senegalese national blood bank from 2003 to 2005

scientific article

Rift Valley Fever Outbreak, Mauritania, 1998: Seroepidemiologic, Virologic, Entomologic, and Zoologic Investigations ⬇️

scientific article published on November 1, 2001

Rift Valley fever in Kedougou, southeastern Senegal, 2012

scientific article

Rift Valley fever outbreak, southern Mauritania, 2012.

scientific article published on February 2014

Role of monkeys in the sylvatic cycle of chikungunya virus in Senegal

scientific article published on 13 March 2018

Seoul Orthohantavirus in Wild Black Rats, Senegal, 2012-2013

scientific article published on 01 October 2020

Sero-prevalence of yellow fever and related Flavi viruses in Ethiopia: a public health perspective

article

Serology testing in the COVID-19 pandemic response

scientific article published on 17 July 2020

Spatio-temporal analysis of the genetic diversity and complexity of Plasmodium falciparum infections in Kedougou, southeastern Senegal

scientific article published on 19 January 2017

Spread of the pandemic Zika virus lineage is associated with NS1 codon usage adaptation in humans

scientific article

Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study

scientific article (publication date: December 2016)

Statistical modeling of the abundance of vectors of West African Rift Valley fever in Barkédji, Senegal

scientific article

Sylvatic Dengue Viruses Share the Pathogenic Potential of Urban/Endemic Dengue Viruses

scientific article

Synchrony of sylvatic dengue isolations: a multi-host, multi-vector SIR model of dengue virus transmission in Senegal

scientific article

Synonymous Mutations in the Core Gene Are Linked to Unusual Serological Profile in Hepatitis C Virus Infection ⬇️

scientific article published on January 6, 2011

Taxonomy of the order Bunyavirales: second update 2018

article by Piet Maes et al published 20 January 2019 in Archives of Virology

Taxonomy of the order Bunyavirales: second update 2018

article by Piet Maes et al published March 2019 in Archives of Virology

Taxonomy of the order Bunyavirales: update 2019

Temporal distribution and spatial pattern of abundance of the Rift Valley fever and West Nile fever vectors in Barkedji, Senegal ⬇️

scientific article published on December 1, 2011

The Brazilian Zika virus strain causes birth defects in experimental models

scientific article

The impact of HCV diversity on diagnosis tools for HCV infection

scientific article published in June 2005

Unexpected high circulation of Plasmodium vivax in asymptomatic children from Kédougou, southeastern Senegal

scientific article published on 29 December 2017

Unusual Ebola Virus Chain of Transmission, Conakry, Guinea, 2014-2015

scientific article

Urban epidemic of dengue virus serotype 3 infection, Senegal, 2009.

scientific article published on March 2014

Use of Viremia to Evaluate the Baseline Case Fatality Ratio of Ebola Virus Disease and Inform Treatment Studies: A Retrospective Cohort Study

scientific article published in December 2015

Use of reverse transcriptase PCR in early diagnosis of Rift Valley fever

scientific article published on May 2002

Usutu Virus Isolated from Rodents in Senegal

scientific article published on 21 February 2019

Usutu Virus in Africa ⬇️

scientific article published on July 18, 2011

Validation of a structural comparison of the antigenic characteristics of Usutu virus and West Nile virus envelope proteins.

scientific article published on 26 May 2014

Vector competence of Aedes aegypti and Aedes vittatus (Diptera: Culicidae) from Senegal and Cape Verde archipelago for West African lineages of chikungunya virus

scientific article

Vector competence of Aedes aegypti populations from Senegal for sylvatic and epidemic dengue 2 virus isolated in West Africa

scientific article

Vector competence of Aedes vexans (Meigen), Culex poicilipes (Theobald) and Cx. quinquefasciatus Say from Senegal for West and East African lineages of Rift Valley fever virus

scientific article published on 20 February 2016

Vector competence of Culex neavei (Diptera: Culicidae) for Usutu virus

scientific article

Vector competence of Culex neavei and Culex quinquefasciatus (Diptera: Culicidae) from Senegal for lineages 1, 2, Koutango and a putative new lineage of West Nile virus

scientific article published on 24 February 2014

Vector competence of anthropophilic mosquitoes for a new mesonivirus in Senegal

scientific article published on 28 February 2020

Viral load among patients infected with Marburgvirus in Angola

scientific article

Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses

scientific article published on 22 September 2015

Virus genomes reveal factors that spread and sustained the Ebola epidemic

scientific article (publication date: 12 April 2017)

Virus genomes reveal the factors that spread and sustained the West African Ebola epidemic

article published in 2016

Widespread Rift Valley Fever Emergence in Senegal in 2013–2014

scientific article (publication date: September 2016)

Worldwide emergence of multiple clades of enterovirus 68.

scientific article published on 13 June 2012

Worldwide survey reveals lower susceptibility of African Aedes aegypti mosquitoes to diverse strains of Zika virus

scholarly article published 10 June 2018

Yellow Fever Virus Exhibits Slower Evolutionary Dynamics than Dengue Virus

scientific article

Yellow Fever outbreak in Darfur, Sudan in October 2012; the initial outbreak investigation report

scientific article published on 25 June 2013

Yellow fever risk assessment in the Central African Republic

scientific article

Zahedan rhabdovirus, a novel virus detected in ticks from Iran

scientific article

Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology

scientific article published on 01 January 2020

Zika Virus, French Polynesia, South Pacific, 2013

scientific article (published 2014-06-01)

Zika virus and microcephaly: why is this situation a PHEIC?

scientific article

Zika virus emergence in mosquitoes in southeastern Senegal, 2011

scientific article

[Profil course of SC sickle-cell patients in Dakar: a case-control study with SS sickle cell form]

scientific article published on 01 January 2017

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