Search filters

List of works by Lars Mathias Blank

<i>Ustilago maydis</i> Metabolic Characterization and Growth Quantification with a Genome-Scale Metabolic Model

scientific article published on 20 May 2022

A Straightforward Assay for Screening and Quantification of Biosurfactants in Microbial Culture Supernatants

scientific article published on 20 August 2020

A blueprint of the amino acid biosynthesis network of hemiascomycetes

scientific article published on 13 October 2014

A breath of information: the volatilome.

scientific article

A comprehensive evaluation of constraining amino acid biosynthesis in compartmented models for metabolic flux analysis

scientific article published on 11 July 2017

A rapid method to estimate NADH regeneration rates in living cells

scientific article published in September 2016

A systems analysis of NADH dehydrogenase mutants reveals flexibility and limits of Pseudomonas taiwanensis VLB120's metabolism

scientific article published on 03 April 2020

Activating Intrinsic Carbohydrate-Active Enzymes of the Smut Fungus Ustilago maydis for the Degradation of Plant Cell Wall Components

scientific article published on 17 June 2016

Adaptive laboratory evolution of Pseudomonas putida and Corynebacterium glutamicum to enhance anthranilate tolerance

scientific article published on 23 October 2020

An Optimized <i>Ustilago maydis</i> for Itaconic Acid Production at Maximal Theoretical Yield

scientific article published on 31 December 2020

Analysis of carbon and nitrogen co-metabolism in yeast by ultrahigh-resolution mass spectrometry applying 13C- and 15N-labeled substrates simultaneously

scientific article published on 29 April 2012

Aromatisation of bio-derivable isobutyraldehyde over HZSM-5 zeolite catalysts

Boosting Heterologous Phenazine Production in Pseudomonas putida KT2440 Through the Exploration of the Natural Sequence Space

scientific article published on 28 August 2019

Carbon metabolism limits recombinant protein production in Pichia pastoris

scientific article

Characterization of Context-Dependent Effects on Synthetic Promoters

scientific article published on 12 June 2020

Chemical and biological single cell analysis

scientific article

Comparison of Isomerase and Weimberg Pathway for γ-PGA Production From Xylose by Engineered Bacillus subtilis

scientific article published on 01 January 2019

Comparison of Three Xylose Pathways in Pseudomonas putida KT2440 for the Synthesis of Valuable Products

scientific article published on 01 January 2019

Complete Genome Sequence and Annotation of the Paracoccus pantotrophus Type Strain DSM 2944

scientific article published on 02 January 2020

Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil

scientific article published on 24 October 2013

Comprehensive Real-Time Analysis of the Yeast Volatilome

scientific article published on 27 October 2017

Comprehensive liamocin biosurfactants analysis by reversed phase liquid chromatography coupled to mass spectrometric and charged-aerosol detection

scientific article published on 15 July 2020

Consolidated bioprocessing of cellulose to itaconic acid by a co-culture of Trichoderma reesei and Ustilago maydis

scientific article published on 14 December 2020

Correlation between TCA cycle flux and glucose uptake rate during respiro-fermentative growth of Saccharomyces cerevisiae

scientific article published on 14 August 2009

Corrigendum: Killing Two Birds With One Stone - Strain Engineering Facilitates the Development of a Unique Rhamnolipid Production Process

scientific article published on 07 October 2020

Coupling an Electroactive <i>Pseudomonas putida</i> KT2440 with Bioelectrochemical Rhamnolipid Production

scientific article published on 10 December 2020

D-Xylose assimilation via the Weimberg pathway by solvent-tolerant Pseudomonas taiwanensis VLB120.

scientific article published on 15 July 2014

Discovery and Evaluation of Biosynthetic Pathways for the Production of Five Methyl Ethyl Ketone Precursors

scientific article published on 07 August 2018

Discovery and Evaluation of Biosynthetic Pathways for the Production of Five Methyl Ethyl Ketone Precursors

Double bond localization in unsaturated rhamnolipid precursors 3-(3-hydroxyalkanoyloxy)alkanoic acids by liquid chromatography-mass spectrometry applying online Paternò-Büchi reaction

scientific article published on 05 July 2020

Draft Genome Sequence of Ustilago trichophora RK089, a Promising Malic Acid Producer

scientific article published on 28 July 2016

Draft Genome Sequences of Itaconate-Producing Ustilaginaceae

scientific article published on 15 December 2016

Dynamics of benzoate metabolism in Pseudomonas putida KT2440.

scientific article published on 15 March 2016

Efficient itaconic acid production from glycerol with Ustilago vetiveriae TZ1.

scientific article published on 19 May 2017

Efficient malic acid production from glycerol with Ustilago trichophora TZ1

scientific article

Electrochemical conversion of a bio-derivable hydroxy acid to a drop-in oxygenate diesel fuel

Electrophysiology of the Facultative Autotrophic Bacterium Desulfosporosinus orientis

scientific article published on 19 May 2020

Elevated temperatures do not trigger a conserved metabolic network response among thermotolerant yeasts

scientific article published on 17 May 2019

Elucidation of the regulatory role of the fructose operon reveals a novel target for enhancing the NADPH supply in Corynebacterium glutamicum

scientific article published on 20 August 2016

Engineering Pseudomonas putida KT2440 for efficient ethylene glycol utilization

Engineering and systems-level analysis of Saccharomyces cerevisiae for production of 3-hydroxypropionic acid via malonyl-CoA reductase-dependent pathway

scientific article

Engineering mediator-based electroactivity in the obligate aerobic bacterium Pseudomonas putida KT2440.

scientific article published on 10 April 2015

Enhanced malic acid production from glycerol with high-cell density Ustilago trichophora TZ1 cultivations

scientific article published on 2 July 2016

Ethanol reduces mitochondrial membrane integrity and thereby impacts carbon metabolism of Saccharomyces cerevisiae

scientific article published on 03 July 2012

Evaluation of pyruvate decarboxylase-negative Saccharomyces cerevisiae strains for the production of succinic acid

scientific article published on 29 August 2019

Evolutionary freedom in the regulation of the conserved itaconate cluster by Ria1 in related Ustilaginaceae.

scientific article published on 28 July 2018

Exploiting the Natural Diversity of RhlA Acyltransferases for the Synthesis of the Rhamnolipid Precursor 3-(3-Hydroxyalkanoyloxy)Alkanoic Acid

scientific article published on 02 March 2020

Exploiting the diversity of streptococcal hyaluronan synthases for the production of molecular weight-tailored hyaluronan

scientific article published on 31 July 2019

Fermentation and purification strategies for the production of betulinic acid and its lupane-type precursors in Saccharomyces cerevisiae

scientific article published on 8 July 2017

Flux-p: automating metabolic flux analysis

scientific article

Foam-free production of the rhamnolipid precursor 3-(3-hydroxyalkanoyloxy) alkanoic acid (HAA) by Pseudomonas putida

scientific article published in 2022

From measurement to implementation of metabolic fluxes ⬇️

scientific article published on 05 December 2012

Functional analysis of the fatty acid and alcohol metabolism of Pseudomonas putida using RB-TnSeq

scientific article published on 21 August 2020

GC-MS-Based Metabolomics for the Smut Fungus Ustilago maydis: A Comprehensive Method Optimization to Quantify Intracellular Metabolites

scientific article published on 19 August 2020

Genetic Cell-Surface Modification for Optimized Foam Fractionation

scientific article published on 29 October 2020

Genetic Optimization Algorithm for Metabolic Engineering Revisited

scientific article published on 16 May 2018

Genetic and biochemical insights into the itaconate pathway of Ustilago maydis enable enhanced production

scientific article published on 14 October 2016

Genome-scale model reconstruction of the methylotrophic yeast Ogataea polymorpha

Glycerophospholipid profiling by high-performance liquid chromatography/mass spectrometry using exact mass measurements and multi-stage mass spectrometric fragmentation experiments in parallel

scientific article

Growth independent rhamnolipid production from glucose using the non-pathogenic Pseudomonas putida KT2440.

scientific article published on 17 October 2011

Haemophilus influenzae Glucose Catabolism Leading to Production of the Immunometabolite Acetate Has a Key Contribution to the Host Airway-Pathogen Interplay

scientific article published on 10 February 2020

High performance liquid chromatography-charged aerosol detection applying an inverse gradient for quantification of rhamnolipid biosurfactants

scientific article published on 25 May 2016

High temperature stimulates acetic acid accumulation and enhances the growth inhibition and ethanol production by Saccharomyces cerevisiae under fermenting conditions

scientific article published on 5 April 2014

High titer methyl ketone production with tailored Pseudomonas taiwanensis VLB120

scientific article published on 15 August 2020

Identification of Key Metabolites in Poly-γ-Glutamic Acid Production by Tuning γ-PGA Synthetase Expression

scientific article published on 30 January 2020

Identification of an endo-1,4-beta-xylanase of Ustilago maydis

scientific article

Improved microscale cultivation of Pichia pastoris for clonal screening.

scientific article

Integrated process development of a reactive extraction concept for itaconic acid and application to a real fermentation broth

scientific article published on 27 March 2017

Integration of Genetic and Process Engineering for Optimized Rhamnolipid Production Using Pseudomonas putida

scientific article published on 20 August 2020

Interaction of rhamnolipids with model biomembranes of varying complexity

scientific article published on 01 August 2020

Killing Two Birds With One Stone - Strain Engineering Facilitates the Development of a Unique Rhamnolipid Production Process

scientific article published on 07 August 2020

MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 March 2020

Mass spectrometric characterization of siderophores produced by Pseudomonas taiwanensis VLB120 assisted by stable isotope labeling of nitrogen source

scientific article published on 28 June 2018

Mechanism-specific and whole-organism ecotoxicity of mono-rhamnolipids

scientific article published on 20 January 2016

Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

Metabolic Engineering of Pseudomonas putida KT2440 to Produce Anthranilate from Glucose

scientific article

Metabolic and transcriptional response to cofactor perturbations in Escherichia coli.

scientific article published on 18 March 2010

Metabolic capacity estimation of Escherichia coli as a platform for redox biocatalysis: constraint-based modeling and experimental verification.

scientific article published in August 2008

Metabolic engineering of Pseudomonas taiwanensis VLB120 with minimal genomic modifications for high-yield phenol production

scientific article published on 13 March 2018

Metabolic engineering of Ustilago trichophora TZ1 for improved malic acid production

scientific article

Metabolic flux analysis of a phenol producing mutant of Pseudomonas putida S12: verification and complementation of hypotheses derived from transcriptomics.

scientific article published on 26 June 2009

Metabolic response of Pseudomonas putida during redox biocatalysis in the presence of a second octanol phase.

scientific article

Metabolic response of Pseudomonas putida to increased NADH regeneration rates

scientific article published on 04 October 2016

Methods for the Analysis of Polyphosphate in the Life Sciences

scientific article published on 02 March 2020

Microbiological quality of raw milk produced in Estonia ⬇️

scientific article published on October 26, 2010

Microfluidic Irreversible Electroporation-A Versatile Tool to Extract Intracellular Contents of Bacteria and Yeast

scientific article published on 30 September 2019

Mitochondrial carriers of Ustilago maydis and Aspergillus terreus involved in itaconate production: same physiological role but different biochemical features

scientific article published on 11 November 2019

Multi-capillary Column Ion Mobility Spectrometry of Volatile Metabolites for Phenotyping of Microorganisms.

scientific article published in January 2018

Multi-capillary column-ion mobility spectrometry of volatile metabolites emitted by Saccharomyces cerevisiae

scientific article published on 5 September 2014

NADH availability limits asymmetric biocatalytic epoxidation in a growing recombinant Escherichia coli strain.

scientific article published on 11 January 2008

Pex17p of Saccharomyces cerevisiae Is a Novel Peroxin and Component of the Peroxisomal Protein Translocation Machinery ⬇️

scientific article published on January 12, 1998

Phosphorus biotechnology ⬇️

scientific article published on October 16, 2012

Physiologic and metabolic characterization of Saccharomyces cerevisiae reveals limitations in the synthesis of the triterpene squalene

scientific article published on 01 December 2018

Picoliter nDEP traps enable time-resolved contactless single bacterial cell analysis in controlled microenvironments.

scientific article published in February 2013

Proline availability regulates proline-4-hydroxylase synthesis and substrate uptake in proline-hydroxylating recombinant Escherichia coli.

scientific article

Prospecting the biodiversity of the fungal family Ustilaginaceae for the production of value-added chemicals.

scientific article published on November 2014

Proteome Regulation Patterns Determine Escherichia coli Wild-Type and Mutant Phenotypes

scientific article published in 2021

Pseudomonas mRNA 2.0: Boosting Gene Expression Through Enhanced mRNA Stability and Translational Efficiency

scientific article published on 01 January 2019

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 April 2020

Quantification of metabolic limitations during recombinant protein production in Escherichia coli.

scientific article

Quantitative physiology of Pichia pastoris during glucose-limited high-cell density fed-batch cultivation for recombinant protein production

scientific article published in October 2010

Rational Engineering of Phenylalanine Accumulation in Pseudomonas taiwanensis to Enable High-Yield Production of Trans-Cinnamate

scientific article published on 20 November 2019

Redox biocatalysis and metabolism: molecular mechanisms and metabolic network analysis.

scientific article published on August 2010

Regulation of solvent tolerance in Pseudomonas putida S12 mediated by mobile elements.

scientific article published on 11 April 2017

Response of Pseudomonas putida KT2440 to increased NADH and ATP demand.

scientific article published on 29 July 2011

Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC

article

Rhamnolipid biosurfactant analysis using online turbulent flow chromatography-liquid chromatography-tandem mass spectrometry

scientific article published on 21 August 2016

Simple enzymatic procedure for L-carnosine synthesis: whole-cell biocatalysis and efficient biocatalyst recycling

scientific article published on 4 August 2009

Single cell analysis reveals unexpected growth phenotype of S. cerevisiae

scientific article published in February 2009

Single cell analytics: an overview

scientific article published on January 2011

Special Issue "Metabolic Engineering and Synthetic Biology Volume 2"

scientific article published on 06 January 2021

Strain- and Substrate-Dependent Redox Mediator and Electricity Production by Pseudomonas aeruginosa

scientific article published on 10 June 2016

Subtoxic product levels limit the epoxidation capacity of recombinant E. coli by increasing microbial energy demands

scientific article published on 16 August 2012

Successful downsizing for high-throughput ¹³C-MFA applications.

scientific article published in January 2014

Tailor-made poly-γ-glutamic acid production

scientific article published on 22 July 2019

The Envirostat - a new bioreactor concept

scientific article published on 19 November 2008

The Transcriptome and Flux Profiling of Crabtree-Negative Hydroxy Acid-Producing Strains of Saccharomyces cerevisiae Reveals Changes in the Central Carbon Metabolism

scientific article published on 17 May 2019

The cell and P: from cellular function to biotechnological application ⬇️

scientific article published on August 30, 2012

The functional structure of central carbon metabolism in Pseudomonas putida KT2440.

scientific article published on 20 June 2014

The glycerophospholipid inventory of Pseudomonas putida is conserved between strains and enables growth condition-related alterations

scientific article published on 6 September 2011

Towards bio-upcycling of polyethylene terephthalate

scientific article published in 2021

Towards real time analysis of protein secretion from single cells

scientific article published on 21 September 2009

Uncoupling Foam Fractionation and Foam Adsorption for Enhanced Biosurfactant Synthesis and Recovery

scientific article published on 18 December 2020

Unraveling 1,4-Butanediol Metabolism in Pseudomonas putida KT2440

scientific article published on 17 March 2020

Using off-gas for insights through online monitoring of ethanol and baker’s yeast volatilome using SESI-Orbitrap MS

scientific article published in 2022

Ustilago maydis produces itaconic acid via the unusual intermediate trans-aconitate ⬇️

scientific article

Yeast-based production and in situ purification of acetaldehyde

scientific article published in 2022

Paulina is supported by:

About Paulina

Help