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List of works by Marja Tiirola

A practical method for barcoding and size-trimming PCR templates for amplicon sequencing

scientific article published in February 2016

Abundant and diverse arsenic-metabolizing microorganisms in peatlands treating arsenic-contaminated mining wastewaters

scientific article published on 06 February 2020

Acidobacteria dominate the active bacterial communities of Arctic tundra with widely divergent winter-time snow accumulation and soil temperatures

scientific article

Bacterial and fungal communities in sub-Arctic tundra heaths are shaped by contrasting snow accumulation and nutrient availability

scientific article published on 12 March 2024

Bacterial and phytoplankton responses to nutrient amendments in a boreal lake differ according to season and to taxonomic resolution

scientific article

Bacterial communities in Arctic fjelds of Finnish Lapland are stable but highly pH-dependent

scientific article published in February 2007

Bacterial community response to changes in a tri-trophic cascade during a whole-lake fish manipulation

scientific article

Biodegradation of microplastic in freshwaters: A long‐lasting process affected by the lake microbiome

scientific article published in 2022

Biofiltration of airborne VOCs with green wall systems-Microbial and chemical dynamics

scientific article published on 06 May 2018

CH4 oxidation in a boreal lake during the development of hypolimnetic hypoxia

scientific article published on 28 December 2019

Carbon quantity defines productivity while its quality defines community composition of bacterioplankton in subarctic ponds

scientific article

Comparing the Ecotoxicological Effects of Perfluorooctanoic Acid (PFOA) and Perfluorohexanoic Acid (PFHxA) on Freshwater Microbial Community

scientific article published in 2022

Consistency of Targeted Metatranscriptomics and Morphological Characterization of Phytoplankton Communities

scientific article published on 06 February 2020

Construction of Metatranscriptomic Libraries for 5′ End Sequencing of rRNAs for Microbiome Research

scientific article

Cooperation between CRISPR-Cas types enables adaptation in an RNA-targeting system

scientific article

Cooperation between Different CRISPR-Cas Types Enables Adaptation in an RNA-Targeting System

scientific article

Cryptogams signify key transitions of bacteria and fungi in Arctic sand dune succession

scientific article published on 03 February 2020

DNA recovery from Droplet Digital™ PCR emulsions using liquid nitrogen

scientific article published on 26 October 2020

Decomposition rate and biochemical fate of carbon from natural polymers and microplastics in boreal lakes

scientific article published in 2022

Denitrifying microbial communities along a boreal stream with varying land-use

scientific article

Directional high-throughput sequencing of RNAs without gene-specific primers

article

Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1.

scientific article

Diversity of bacteria contaminating paper machines

scientific article

Do shifts in life strategies explain microbial community responses to increasing nitrogen in tundra soil?

article

Early succession of bacterial biofilms in paper machines

scientific article

Effect of Freeze-Thaw Cycles on Bacterial Communities of Arctic Tundra Soil

scientific article published on 15 April 2009

Effect of peracetic acid on levels of geosmin, 2-methylisoborneol, and their potential producers in a recirculating aquaculture system for rearing rainbow trout (Oncorhynchus mykiss)

scientific article

Effects of alternative electron acceptors on the activity and community structure of methane-producing and consuming microbes in the sediments of two shallow boreal lakes.

scientific article published on 15 June 2017

Effects of soybean meal based diet on growth performance, gut histopathology and intestinal microbiota of juvenile rainbow trout (Oncorhynchus mykiss)

article by Jouni Heikkinen et al published November 2006 in Aquaculture

Enhanced greenhouse gas emissions and changes in plankton communities following an experimental increase in organic carbon loading to a humic lake

article

Enhanced nitrogen removal of low carbon wastewater in denitrification bioreactors by utilizing industrial waste toward circular economy

scientific article

Enrichment of Bacterioplankton Able to Utilize One-Carbon and Methylated Compounds in the Coastal Pacific Ocean

scientific article

Eutrophication reduces the nutritional value of phytoplankton in boreal lakes

scientific article published on 29 October 2019

Evidence for natural horizontal transfer of the pcpB gene in the evolution of polychlorophenol-degrading sphingomonads.

scientific article published on September 2002

Evidence of enhanced bacterial invasion during Diplostomum spathaceum infection in European grayling, Thymallus thymallus (L.).

scientific article published in February 2006

Expression, purification, characterization and in silico analysis of newly isolated hydrocarbon degrading bleomycin resistance dioxygenase

scientific article published on 13 November 2019

Freezing induces biased results in the molecular detection of Flavobacterium columnare

scientific article published in February 2006

Functional gene pyrosequencing reveals core proteobacterial denitrifiers in boreal lakes.

scientific article published on July 2015

Gammaproteobacterial methanotrophs dominate methanotrophy in aerobic and anaerobic layers of boreal lake waters

scientific article

Genetic and environmental controls on nitrous oxide accumulation in lakes

scientific article published on 10 March 2015

Genetic diversity and phenotypic characterization of Iodobacter limnosediminis associated with skin lesions in freshwater fish

scientific article

Grazing intensity in subarctic tundra affects the temperature adaptation of soil microbial communities

Green sulphur bacteria as a component of the photosynthetic plankton community in small dimictic humic lakes with an anoxic hypolimnion

scientific article

Impacts of added dissolved organic carbon on boreal freshwater pelagic metabolism and food webs in mesocosm experiments

scientific article

Interlake variation and environmental controls of denitrification across different geographical scales

scientific article

Irradiation of the head reduces adult hippocampal neurogenesis and impairs spatial memory, but leaves overall health intact in rats

scientific article published on 31 December 2020

Limnocnida tanganyicae medusae (Cnidaria: Hydrozoa): a semiautonomous microcosm in the food web of Lake Tanganyika

scientific article

Metaanin hapettajat – suon hiilen ja typen kierron kaksoisagentit

scientific article

Methane-oxidizing and photoautotrophic bacteria are major producers in a humic lake with a large anoxic hypolimnion

article

Methanotrophs are core members of the diazotroph community in decaying Norway spruce logs

scientific article

Methanotrophy induces nitrogen fixation during peatland development.

scientific article published on 30 December 2013

Methylophaga and Hyphomicrobium can be used as target genera in monitoring saline water methanol-utilizing denitrification

scientific article

Methylophilaceae and Hyphomicrobium as target taxonomic groups in monitoring the function of methanol-fed denitrification biofilters in municipal wastewater treatment plants.

scientific article published on 8 November 2016

Microbial Community Response on Wastewater Discharge in Boreal Lake Sediments

scientific article

Microbial communities in full-scale woodchip bioreactors treating aquaculture effluents

scientific article

Microbial diversity along a gradient in peatlands treating mining-affected waters

scientific article published on 01 October 2018

Microbial diversity in a thermophilic aerobic biofilm process: analysis by length heterogeneity PCR (LH-PCR).

scientific article published in May 2003

Microbiome response to foam fractionation and ozonation in RAS

scientific article

New insight to the role of microbes in the methane exchange in trees: evidence from metagenomic sequencing

scientific article

Nitrate removal microbiology in woodchip bioreactors: A case-study with full-scale bioreactors treating aquaculture effluents

scientific article published on 21 March 2020

Nitrogen fixation and methanotrophy in forest mosses along a N deposition gradient

scientific article

Nitrogen fixation in Sphagnum mosses is affected by moss species and water table level

scientific article

Novosphingobium lentum sp. nov., a psychrotolerant bacterium from a polychlorophenol bioremediation process

scientific article

Out of sight: Profiling soil characteristics, nutrients and bacterial communities affected by organic amendments down to one meter in a long-term maize experiment

scientific article

Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats

scientific article published on 22 October 2020

Resistant ammonia-oxidizing archaea endure, but adapting ammonia-oxidizing bacteria thrive in boreal lake sediments receiving nutrient-rich effluents

article

Salinity affects nitrate removal and microbial composition of denitrifying woodchip bioreactors treating recirculating aquaculture system effluents

scientific article

Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing

scientific article published on 26 September 2017

Sediment diffusion method improves wastewater nitrogen removal in the receiving lake sediments

scientific article published on 27 March 2018

Spatial and temporal changes in Actinobacterial dominance in experimental artificial groundwater recharge.

scientific article

Spatial and temporal variation in denitrification and in the denitrifier community in a boreal lake

scientific article

Stable isotope profiles of nitrogen gas indicate denitrification in oxygen-stratified humic lakes

scientific article published on 01 June 2011

Storage of environmental samples for guaranteeing nucleic acid yields for molecular microbiological studies.

scientific article published on 21 August 2010

Successful aerobic bioremediation of groundwater contaminated with higher chlorinated phenols by indigenous degrader bacteria

scientific article published on 13 March 2018

Suppression of Saprolegnia infections in rainbow trout (Oncorhynchus mykiss) eggs using protective bacteria and ultraviolet irradiation of the hatchery water

scientific article

The Value of Liquid Biopsies for Guiding Therapy Decisions in Non-small Cell Lung Cancer

scientific article published on 05 March 2019

The effect of iron on the biodegradation of natural dissolved organic matter

scientific article

The effect of peracetic acid on microbial community, water quality, nitrification and rainbow trout (Oncorhynchus mykiss) performance in recirculating aquaculture systems

scientific article

The effects of different combinations of fixed and moving bed bioreactors on rainbow trout (Oncorhynchus mykiss) growth and health, water quality and nitrification in recirculating aquaculture systems

scientific article

The role of Sphagnum mosses in the methane cycling of a boreal mire.

scientific article published in August 2010

The second life of terrestrial and plastic carbon as nutritionally valuable food for aquatic consumers

scientific article published in 2023

Tracing the fate of microplastic carbon in the aquatic food web by compound-specific isotope analysis

scientific article published on 27 December 2019

Vertical diversity of bacteria in an oxygen-stratified humic lake, evaluated using DNA and phospholipid analyses

scientific article published in 2009

Vertical stratification of bacteria and archaea in sediments of a small boreal humic lake

article

Vertical stratification patterns of methanotrophs and their genetic controllers in water columns of oxygen-stratified boreal lakes

scientific article published on 14 December 2020

Whole-lake dissolved inorganic 13C additions reveal seasonal shifts in zooplankton diet

scientific article published in February 2008

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