List of works - Melanie Courtot

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

scientific article

BioModels.net Web Services, a free and integrated toolkit for computational modelling software

scientific article

BioSamples database: FAIRer samples metadata to accelerate research data management

BioSamples database: an updated sample metadata hub

scientific article published on 01 January 2019

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

scientific article

Controlled vocabularies and semantics in systems biology

scientific article (publication date: 25 October 2011)

ELIXIR biovalidator for semantic validation of life science metadata

scientific article published in 2022

Erratum: The Systems Biology Graphical Notation

scholarly article published in Nature Biotechnology

FAIR Principles: Interpretations and Implementation Considerations

scholarly article

Features of a FAIR vocabulary ⬇️

Finding our way through phenotypes

scientific article

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF

scientific article

GA4GH: International policies and standards for data sharing across genomic research and healthcare

scientific article published on 10 November 2021

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article (publication date: 20 March 2017)

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article

Modeling biomedical experimental processes with OBI

scientific article

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

scientific article published on 13 October 2021

OntoFox: web-based support for ontology reuse

scientific article

Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration

scientific article (publication date: 12 October 2016)

Overcoming the Ontology Enrichment Bottleneck with Quick Term Templates

Prospects for Fungal Bioremediation of Acidic Radioactive Waste Sites: Characterization and Genome Sequence of Rhodotorula taiwanensis MD1149.

scientific article published in January 2017

Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR

scientific article published in 2022

Structural genomics on membrane proteins: comparison of more than 100 GPCRs in 3 expression systems.

scientific article

The Ontology for Biomedical Investigations

scientific article

The logic of surveillance guidelines: an analysis of vaccine adverse event reports from an ontological perspective

scientific article

List of works by Melanie Courtot

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

BioModels.net Web Services, a free and integrated toolkit for computational modelling software

BioSamples database: FAIRer samples metadata to accelerate research data management

BioSamples database: an updated sample metadata hub

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

Controlled vocabularies and semantics in systems biology

ELIXIR biovalidator for semantic validation of life science metadata

Erratum: The Systems Biology Graphical Notation

FAIR Principles: Interpretations and Implementation Considerations

Features of a FAIR vocabulary ⬇️

Finding our way through phenotypes

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF

GA4GH: International policies and standards for data sharing across genomic research and healthcare

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

Modeling biomedical experimental processes with OBI

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

OntoFox: web-based support for ontology reuse

Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration

Overcoming the Ontology Enrichment Bottleneck with Quick Term Templates

Overcoming the Ontology Enrichment Bottleneck with Quick Term Templates

Prospects for Fungal Bioremediation of Acidic Radioactive Waste Sites: Characterization and Genome Sequence of Rhodotorula taiwanensis MD1149.

Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR

Structural genomics on membrane proteins: comparison of more than 100 GPCRs in 3 expression systems.

The Ontology for Biomedical Investigations

The logic of surveillance guidelines: an analysis of vaccine adverse event reports from an ontological perspective

Using OWL reasoning to support the generation of novel gene sets for enrichment analysis

VO: Vaccine Ontology

VO: Vaccine Ontology

VO: Vaccine Ontology

VO: Vaccine Ontology

flowCL: ontology-based cell population labelling in flow cytometry