List of works - Maria Arménia Carrondo

1,3-Propanediol Dehydrogenase from Klebsiella pneumoniae: Decameric Quaternary Structure and Possible Subunit Cooperativity

scientific article

A preliminary analysis of the three-dimensional structure of dimeric di-haem split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774 at 2.5-Å resolution using the MAD phasing method: a novel cytochrome fold with a stacked-haem arrangeme

scientific article published in August 1997

Ab initio structure solution of a dimeric cytochrome c3 from Desulfovibrio gigas containing disulfide bridges.

scientific article published in April 1999

An iterative structure-assisted approach to sequence alignment and comparative modeling

Auto-induction and purification of a Bacillus subtilis transglutaminase (Tgl) and its preliminary crystallographic characterization

scientific article

Cloning, expression, purification, crystallization and preliminary X-ray analysis of the human RuvBL1-RuvBL2 complex

scientific article published on 20 August 2008

Cloning, expression, purification, crystallization and preliminary structure determination of glucose-1-phosphate uridylyltransferase (UgpG) from Sphingomonas elodea ATCC 31461 bound to glucose-1-phosphate.

scientific article published on 26 August 2006

Comparative redox and pK a calculations on cytochrome c 3 from several Desulfovibrio species using continuum electrostatic methods

Conformational component in the coupled transfer of multiple electrons and protons in a monomeric tetraheme cytochrome

scientific article

Crystal Structure of the Gamma-2 Herpesvirus LANA DNA Binding Domain Identifies Charged Surface Residues Which Impact Viral Latency

scientific article

Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties

scientific article (publication date: 23 May 2003)

Crystal structure of a junction between two Z-DNA helices

scientific article

Crystal structure of desulforedoxin from Desulfovibrio gigas determined at 1.8 A resolution: a novel non-heme iron protein structure

scientific article

Crystal structure of the full-length sorbitol operon regulator SorC from Klebsiella pneumoniae: structural evidence for a novel transcriptional regulation mechanism

scientific article

Crystal structure of the human AAA+ protein RuvBL1.

scientific article published on 23 October 2006

Crystal structures of the free and sterol-bound forms of beta-cinnamomin

scientific article

Crystallization and preliminary X-ray characterization of 1,3-propanediol dehydrogenase from the human pathogen Klebsiella pneumoniae

scientific article published on 28 February 2007

Crystallization and preliminary X-ray characterization of a ferritin from the hyperthermophilic archaeon and anaerobe Pyrococcus furiosus

scientific article published on 22 April 2005

Crystallization and preliminary X-ray characterization of a glycerol dehydrogenase from the human pathogen Salmonella enterica serovar Typhimurium

scientific article published on 27 June 2009

Crystallization and preliminary X-ray characterization of cytochrome c" from the obligate methylotroph Methylophilus methylotrophus

scientific article published on 21 February 2003

Crystallization and preliminary X-ray crystallographic studies of the plant aspartic proteinase cardosin A

article

Crystallization and preliminary X-ray diffraction analysis of tetra-heme cytochrome c3 from sulfate- and nitrate-reducing Desulfovibrio desulfuricans ATCC 27774

scientific article published on 01 March 1994

Crystallization and preliminary X-ray diffraction studies of a catechol-O-methyltransferase/inhibitor complex

scientific article published on 24 December 2004

Crystallization and preliminary crystallographic characterization of catechol-O-methyltransferase in complex with its cosubstrate and an inhibitor

scientific article published on 25 May 2001

Crystallization and preliminary diffraction data analysis of both single and pseudo-merohedrally twinned crystals of rubredoxin oxygen oxidoreductase from Desulfovibrio gigas.

scientific article

Crystallization and preliminary x-ray diffraction analysis of beta-cinnamomin, an elicitin secreted by the phytopathogenic fungus Phytophthora cinnamomin.

scientific article

Crystallization, diffraction data collection and preliminary crystallographic analysis of hexagonal crystals of Pseudomonas aeruginosa amidase.

scientific article

Crystallographic analysis of the intact metal centres [3Fe-4S](1+/0) and [4Fe-4S](2+/1+) in a Zn(2+) -containing ferredoxin

scientific article

Crystallographic evidence for dioxygen interactions with iron proteins.

scientific article published on 21 February 2007

Cytochrome c6 from the green alga Monoraphidium braunii. Crystallization and preminary diffraction studies

scientific article published on 01 March 1995

Dioxygen reduction by multi-copper oxidases; a structural perspective

scientific article

Evolution in a family of chelatases facilitated by the introduction of active site asymmetry and protein oligomerization

scientific article

Expression, purification, crystallization and preliminary X-ray analysis of the human RuvB-like protein RuvBL1.

scientific article published on 16 December 2005

Expression, purification, crystallization and preliminary X-ray characterization of two crystal forms of stationary-phase survival E protein from Campylobacter jejuni.

scientific article published on 29 February 2008

Expression, purification, crystallization and preliminary diffraction data characterization of Escherichia coli ribonuclease II (RNase II).

scientific article

Ferritins, iron uptake and storage from the bacterioferritin viewpoint

scientific article

Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation

scientific article

Implicit solvation in the self-consistent mean field theory method: sidechain modelling and prediction of folding free energies of protein mutants.

scientific article published on August 2001

Improved modeling of side-chains in proteins with rotamer-based methods: A flexible rotamer model

scientific article published on 01 December 1999

Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase

scientific article

KSHV but not MHV-68 LANA induces a strong bend upon binding to terminal repeat viral DNA.

scientific article published on 30 September 2015

Kinetics and crystal structure of catechol-o-methyltransferase complex with co-substrate and a novel inhibitor with potential therapeutic application

scientific article

Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6

scientific article

Nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774 : primary sequence determination, crystallographic refinement at 1.8 and modelling studies of its interaction with the tetrahaem cytochrome c 3

scientific article published in August 1999

Overexpression, purification and crystallization of the tetrameric form of SorC sorbitol operon regulator

scientific article

Overproduction, crystallization and preliminary X-ray characterization of Abn2, an endo-1,5-alpha-arabinanase from Bacillus subtilis

scientific article published on 11 June 2008

Preliminary crystallographic analysis and further characterization of a dodecaheme cytochrome c from Desulfovibrio desulfuricans ATCC 27774

scientific article published on 01 November 1996

Proton-assisted two-electron transfer in natural variants of tetraheme cytochromes from Desulfomicrobium Sp.

scientific article

Quaternary structure of flavorubredoxin as revealed by synchrotron radiation small-angle X-ray scattering.

scientific article published in September 2008

Redox-Bohr and other cooperativity effects in the nine-heme cytochrome C from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies

scientific article (publication date: 19 September 2003)

Reduction of dioxygen by enzymes containing copper.

scientific article published on 20 May 2006

RuvBL1 and RuvBL2 and Their Complex Proteins Implicated in Many Cellular Pathways

Spore-coat laccase CotA from Bacillus subtilis: crystallization and preliminary X-ray characterization by the MAD method

scientific article published on 23 August 2002

Structural Evidence of a Fourth Gla Residue in Fish Osteocalcin: Biological Implications†,‡

scientific article published on 01 February 2005

Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking

scientific article

Structural and functional insights into a dodecameric molecular machine - the RuvBL1/RuvBL2 complex

scientific article

Structural and functional relationships in the hybrid cluster protein family: structure of the anaerobically purified hybrid cluster protein from Desulfovibrio vulgaris at 1.35 A resolution

scientific article

Structural basis for the glucocorticoid response in a mutant human androgen receptor (AR(ccr)) derived from an androgen-independent prostate cancer

scientific article

Structural evidence for a proton transfer pathway coupled with haem reduction of cytochrome c″ from Methylophilus methylotrophus

article

Structural studies on flavodiiron proteins

scientific article published on January 2008

Structure determination of bacterioferritin fromDesulfovibrio desulfuricansby the MAD method at the FeK-edge

scientific article published in February 2001

Structure of Escherichia coli Flavodiiron Nitric Oxide Reductase

scientific article

Structure of amidase from Pseudomonas aeruginosa showing a trapped acyl transfer reaction intermediate state

scientific article

Structure of dimeric cytochromec3fromDesulfovibrio gigasat 1.2 Å resolution

Structure of the monofunctional heme catalase DR1998 from Deinococcus radiodurans

scientific article

Structure of wild-type Plk-1 kinase domain in complex with a selective DARPin

scientific article

Structure of β-cinnamomin, a protein toxic to some plant species

article

Substrate and dioxygen binding to the endospore coat laccase from Bacillus subtilis

scientific article

Sulfate respiration in Desulfovibrio vulgaris Hildenborough. Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and a view of its role in transmembrane electron transfer

scientific article

Sulphate respiration from hydrogen in Desulfovibrio bacteria: a structural biology overview

scientific article

Synthesis, anticonvulsant properties and pharmacokinetic profile of novel 10,11-dihydro-10-oxo-5H-dibenz/b,f/azepine-5-carboxamide derivatives

scientific article

The Kaposi Sarcoma Herpesvirus Latency-associated Nuclear Antigen DNA Binding Domain Dorsal Positive Electrostatic Patch Facilitates DNA Replication and Episome Persistence.

scientific article

The architecture of the binding site in redox protein complexes: implications for fast dissociation

scientific article

The caa3 terminal oxidase of the thermohalophilic bacterium Rhodothermus marinus: a HiPIP:oxygen oxidoreductase lacking the key glutamate of the D-channel

scientific article published on 01 September 1999

The importance of the Abn2 calcium cluster in the endo-1,5-arabinanase activity from Bacillus subtilis

scientific article

The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans

scientific article (publication date: April 2003)

Theoretical studies on the redox-Bohr effect in cytochrome c 3 from Desulfovibrio vulgaris Hildenborough

Thermofluor-based optimization strategy for the stabilization and crystallization of Campylobacter jejuni desulforubrerythrin.

scientific article

Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.

scientific article

X-ray comparison of the molecular structures of 4a-methyl-1,3,9-triphenyl-4a-H-fluorene and its Fe(CO)3 complex

X-ray structure of [Ru3 O2 (NH3)14]6+, cation of the cytological reagent ruthenium red

scientific article published on 01 February 1980

List of works by Maria Arménia Carrondo

1,3-Propanediol Dehydrogenase from Klebsiella pneumoniae: Decameric Quaternary Structure and Possible Subunit Cooperativity

A preliminary analysis of the three-dimensional structure of dimeric di-haem split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774 at 2.5-Å resolution using the MAD phasing method: a novel cytochrome fold with a stacked-haem arrangeme

Ab initio structure solution of a dimeric cytochrome c3 from Desulfovibrio gigas containing disulfide bridges.

An iterative structure-assisted approach to sequence alignment and comparative modeling

Auto-induction and purification of a Bacillus subtilis transglutaminase (Tgl) and its preliminary crystallographic characterization

Cloning, expression, purification, crystallization and preliminary X-ray analysis of the human RuvBL1-RuvBL2 complex

Cloning, expression, purification, crystallization and preliminary structure determination of glucose-1-phosphate uridylyltransferase (UgpG) from Sphingomonas elodea ATCC 31461 bound to glucose-1-phosphate.

Comparative redox and pK a calculations on cytochrome c 3 from several Desulfovibrio species using continuum electrostatic methods

Conformational component in the coupled transfer of multiple electrons and protons in a monomeric tetraheme cytochrome

Crystal Structure of the Gamma-2 Herpesvirus LANA DNA Binding Domain Identifies Charged Surface Residues Which Impact Viral Latency

Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties

Crystal structure of a junction between two Z-DNA helices

Crystal structure of desulforedoxin from Desulfovibrio gigas determined at 1.8 A resolution: a novel non-heme iron protein structure

Crystal structure of the full-length sorbitol operon regulator SorC from Klebsiella pneumoniae: structural evidence for a novel transcriptional regulation mechanism

Crystal structure of the human AAA+ protein RuvBL1.

Crystal structures of the free and sterol-bound forms of beta-cinnamomin

Crystallization and preliminary X-ray characterization of 1,3-propanediol dehydrogenase from the human pathogen Klebsiella pneumoniae

Crystallization and preliminary X-ray characterization of a ferritin from the hyperthermophilic archaeon and anaerobe Pyrococcus furiosus

Crystallization and preliminary X-ray characterization of a glycerol dehydrogenase from the human pathogen Salmonella enterica serovar Typhimurium

Crystallization and preliminary X-ray characterization of cytochrome c" from the obligate methylotroph Methylophilus methylotrophus

Crystallization and preliminary X-ray crystallographic studies of the plant aspartic proteinase cardosin A

Crystallization and preliminary X-ray diffraction analysis of tetra-heme cytochrome c3 from sulfate- and nitrate-reducing Desulfovibrio desulfuricans ATCC 27774

Crystallization and preliminary X-ray diffraction studies of a catechol-O-methyltransferase/inhibitor complex

Crystallization and preliminary crystallographic characterization of catechol-O-methyltransferase in complex with its cosubstrate and an inhibitor

Crystallization and preliminary diffraction data analysis of both single and pseudo-merohedrally twinned crystals of rubredoxin oxygen oxidoreductase from Desulfovibrio gigas.

Crystallization and preliminary x-ray diffraction analysis of beta-cinnamomin, an elicitin secreted by the phytopathogenic fungus Phytophthora cinnamomin.

Crystallization, diffraction data collection and preliminary crystallographic analysis of hexagonal crystals of Pseudomonas aeruginosa amidase.

Crystallographic analysis of the intact metal centres [3Fe-4S](1+/0) and [4Fe-4S](2+/1+) in a Zn(2+) -containing ferredoxin

Crystallographic evidence for dioxygen interactions with iron proteins.

Cytochrome c6 from the green alga Monoraphidium braunii. Crystallization and preminary diffraction studies

Dioxygen reduction by multi-copper oxidases; a structural perspective

Evolution in a family of chelatases facilitated by the introduction of active site asymmetry and protein oligomerization

Expression, purification, crystallization and preliminary X-ray analysis of the human RuvB-like protein RuvBL1.

Expression, purification, crystallization and preliminary X-ray characterization of two crystal forms of stationary-phase survival E protein from Campylobacter jejuni.

Expression, purification, crystallization and preliminary diffraction data characterization of Escherichia coli ribonuclease II (RNase II).

Ferritins, iron uptake and storage from the bacterioferritin viewpoint

Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation

Implicit solvation in the self-consistent mean field theory method: sidechain modelling and prediction of folding free energies of protein mutants.

Improved modeling of side-chains in proteins with rotamer-based methods: A flexible rotamer model

Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase

KSHV but not MHV-68 LANA induces a strong bend upon binding to terminal repeat viral DNA.

Kinetics and crystal structure of catechol-o-methyltransferase complex with co-substrate and a novel inhibitor with potential therapeutic application

Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6

Nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774 : primary sequence determination, crystallographic refinement at 1.8 and modelling studies of its interaction with the tetrahaem cytochrome c 3

Overexpression, purification and crystallization of the tetrameric form of SorC sorbitol operon regulator

Overproduction, crystallization and preliminary X-ray characterization of Abn2, an endo-1,5-alpha-arabinanase from Bacillus subtilis

Preliminary crystallographic analysis and further characterization of a dodecaheme cytochrome c from Desulfovibrio desulfuricans ATCC 27774

Proton-assisted two-electron transfer in natural variants of tetraheme cytochromes from Desulfomicrobium Sp.

Quaternary structure of flavorubredoxin as revealed by synchrotron radiation small-angle X-ray scattering.

Redox-Bohr and other cooperativity effects in the nine-heme cytochrome C from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies

Reduction of dioxygen by enzymes containing copper.

RuvBL1 and RuvBL2 and Their Complex Proteins Implicated in Many Cellular Pathways

Spore-coat laccase CotA from Bacillus subtilis: crystallization and preliminary X-ray characterization by the MAD method

Structural Evidence of a Fourth Gla Residue in Fish Osteocalcin: Biological Implications†,‡

Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking

Structural and functional insights into a dodecameric molecular machine - the RuvBL1/RuvBL2 complex

Structural and functional relationships in the hybrid cluster protein family: structure of the anaerobically purified hybrid cluster protein from Desulfovibrio vulgaris at 1.35 A resolution

Structural basis for the glucocorticoid response in a mutant human androgen receptor (AR(ccr)) derived from an androgen-independent prostate cancer

Structural evidence for a proton transfer pathway coupled with haem reduction of cytochrome c″ from Methylophilus methylotrophus

Structural studies on flavodiiron proteins

Structure determination of bacterioferritin fromDesulfovibrio desulfuricansby the MAD method at the FeK-edge

Structure of Escherichia coli Flavodiiron Nitric Oxide Reductase

Structure of amidase from Pseudomonas aeruginosa showing a trapped acyl transfer reaction intermediate state

Structure of dimeric cytochromec3fromDesulfovibrio gigasat 1.2 Å resolution

Structure of the monofunctional heme catalase DR1998 from Deinococcus radiodurans

Structure of wild-type Plk-1 kinase domain in complex with a selective DARPin

Structure of β-cinnamomin, a protein toxic to some plant species

Substrate and dioxygen binding to the endospore coat laccase from Bacillus subtilis

Sulfate respiration in Desulfovibrio vulgaris Hildenborough. Structure of the 16-heme cytochrome c HmcA AT 2.5-A resolution and a view of its role in transmembrane electron transfer

Sulphate respiration from hydrogen in Desulfovibrio bacteria: a structural biology overview

Synthesis, anticonvulsant properties and pharmacokinetic profile of novel 10,11-dihydro-10-oxo-5H-dibenz/b,f/azepine-5-carboxamide derivatives

The Kaposi Sarcoma Herpesvirus Latency-associated Nuclear Antigen DNA Binding Domain Dorsal Positive Electrostatic Patch Facilitates DNA Replication and Episome Persistence.

The architecture of the binding site in redox protein complexes: implications for fast dissociation

The caa3 terminal oxidase of the thermohalophilic bacterium Rhodothermus marinus: a HiPIP:oxygen oxidoreductase lacking the key glutamate of the D-channel

The importance of the Abn2 calcium cluster in the endo-1,5-arabinanase activity from Bacillus subtilis

The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans

Theoretical studies on the redox-Bohr effect in cytochrome c 3 from Desulfovibrio vulgaris Hildenborough

Thermofluor-based optimization strategy for the stabilization and crystallization of Campylobacter jejuni desulforubrerythrin.

Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.