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List of works by Perttu Permi

1H, 13C and 15N NMR chemical shift assignments of A. thaliana RCD1 RST.

scientific article

1H, 13C and 15N NMR chemical shift assignments of cAMP-regulated phosphoprotein-19 and -16 (ARPP-19 and ARPP-16)

scientific article published on 28 May 2020

1H, 13C and 15N resonance assignments of the human filamin A tandem immunoglobulin-like domains 16-17 and 18-19

scientific article published on 04 January 2009

1H, 13C and 15N resonance assignments of the human mesencephalic astrocyte-derived neurotrophic factor

scientific article published on 09 July 2010

1H, 13C and 15N resonance assignments of the major extracytoplasmic domain of the cell shape-determining protein MreC from Bacillus subtilis

scientific article published on 11 July 2010

1H, 13C and 15N resonance assignments of the new lysostaphin family endopeptidase catalytic domain from Staphylococcus aureus

scientific article

4-Methylproline guided natural product discovery: co-occurrence of 4-hydroxy- and 4-methylprolines in nostoweipeptins and nostopeptolides.

scientific article

A Novel Cyanobacterial Nostocyclopeptide is a Potent Antitoxin against Microcystins

scientific article published on 23 June 2010

A Novel Structural Unit in the N-terminal Region of Filamins

scientific article

A novel intrinsically disordered outer membrane lipoprotein of Aggregatibacter actinomycetemcomitans binds various cytokines and plays a role in biofilm response to interleukin-1β and interleukin-8.

scientific article published on 26 July 2016

A set of HA-detected experiments for measuring scalar and residual dipolar couplings

scientific article

A spin-state-selective experiment for measuring heteronuclear one-bond and homonuclear two-bond couplings from an HSQC-type spectrum

scientific article published on 01 January 2002

Alignment of chain-like molecules

scientific article published in August 2004

Alpha proton detection based backbone assignment of intrinsically disordered proteins

scientific article published on 01 January 2012

Alternative Biosynthetic Starter Units Enhance the Structural Diversity of Cyanobacterial Lipopeptides

scientific article published on 06 February 2019

An intraresidual i(HCA)CO(CA)NH experiment for the assignment of main-chain resonances in 15N, 13C labeled proteins

scientific article published on 01 November 2009

Anabaenolysins, novel cytolytic lipopeptides from benthic Anabaena cyanobacteria ⬇️

scientific article

Antifungal activity improved by coproduction of cyclodextrins and anabaenolysins in Cyanobacteria ⬇️

scientific article

Antifungal compounds from cyanobacteria. ⬇️

scientific article

Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

scientific article published on 15 February 2019

Atomic Structures of Two Novel Immunoglobulin-like Domain Pairs in the Actin Cross-linking Protein Filamin

scientific article

Backbone NMR assignment of the internal interaction site of ALP.

scientific article published on 20 July 2007

Bridge over troubled proline: assignment of intrinsically disordered proteins using (HCA)CON(CAN)H and (HCA)N(CA)CO(N)H experiments concomitantly with HNCO and i(HCA)CO(CA)NH

scientific article published on 18 December 2013

Characterization of intrinsically disordered prostate associated gene (PAGE5) at single residue resolution by NMR spectroscopy

scientific article

Characterization of sulfhydryl oxidase from Aspergillus tubingensis

scientific article

Characterization of the interaction between Actinin-Associated LIM Protein (ALP) and the rod domain of alpha-actinin

scientific article

Characterization of the interaction of the antifungal and cytotoxic cyclic glycolipopeptide hassallidin with sterol-containing lipid membranes

scientific article published on 19 June 2019

Chimeric Avidin – NMR Structure and Dynamics of a 56 kDa Homotetrameric Thermostable Protein

scientific article

Clean HMBC: suppression of strong-coupling induced artifacts in HMBC spectra

scientific article

Critical Structural Defects Explain Filamin A Mutations Causing Mitral Valve Dysplasia

scientific article published on 31 August 2019

Crystal structure of the N-terminal NC4 domain of collagen IX, a zinc binding member of the laminin-neurexin-sex hormone binding globulin (LNS) domain family

scientific article

Decreased temperature increases the expression of a disordered bacterial late embryogenesis abundant (LEA) protein that enhances natural transformation

scientific article

Determination of three-bond scalar coupling between 13C' and 1H(alpha) in proteins using an iHN(CA),CO(alpha/beta-J-COHA) experiment

scientific article published in July 2003

Direct pathway cloning and expression of the radiosumin biosynthetic gene cluster

scientific article published in 2023

Discovery of a pederin family compound in a non-symbiotic bloom-forming cyanobacterium. ⬇️

scientific article published on 23 March 2018

Dispersion from Cα or NH: 4D experiments for backbone resonance assignment of intrinsically disordered proteins

scientific article published on 13 January 2020

Diversity in prokaryotic glycosylation: an archaeal-derived N-linked glycan contains legionaminic acid

scientific article published on 11 April 2012

Dynamic Stabilization of the Ligand-Metal Interface in Atomically Precise Gold Nanoclusters Au68 and Au144 Protected by meta-Mercaptobenzoic Acid.

scientific article

Effect of protein structural integrity on cross-linking by tyrosinase evidenced by multidimensional heteronuclear magnetic resonance spectroscopy ⬇️

scientific article published on November 16, 2010

Effect of protein structure on laccase-catalyzed protein oligomerization.

scientific article

Efficient assignment of methyl resonances: enhanced sensitivity by gradient selection in a DE-MQ-(H)CC(m)Ht (m)-TOCSY experiment

scientific article published on 01 November 2004

Enterohaemorrhagic Escherichia Coli Exploits a Tryptophan Switch to Hijack Host F-Actin Assembly

scientific article

Evaluation and optimization of coherence transfer in high molecular weight systems

scientific article published in March 2002

Extension of the HA-detection based approach: (HCA)CON(CA)H and (HCA)NCO(CA)H experiments for the main-chain assignment of intrinsically disordered proteins ⬇️

scientific article published on January 25, 2011

Fine-tuning the extent and dynamics of binding cleft opening as a potential general regulatory mechanism in parvulin-type peptidyl prolyl isomerases

scientific article published on 16 March 2017

Flexible Structure of Peptide-Bound Filamin A Mechanosensor Domain Pair 20-21

scientific article published on 31 August 2015

Genome mining expands the chemical diversity of the cyanobactin family to include highly modified linear peptides

scientific article published in August 2013

H(N), N(H), C (α), C (β), and methyl group assignments of filamin multidomain fragments IgFLNc4-5 and IgFLNa3-5

scientific article published on 11 January 2014

H(N), N, C(α), C(β) and C' assignments of the intrinsically disordered C-terminus of human adenosine A2A receptor

scientific article published on 08 May 2015

H, C, and N NMR chemical shift assignment of the complex formed by the first EPEC EspF repeat and N-WASP GTPase binding domain

scientific article

HA-detected experiments for the backbone assignment of intrinsically disordered proteins.

scientific article

HACANCOi: a new Hα-detected experiment for backbone resonance assignment of intrinsically disordered proteins

scientific article published on 28 October 2020

Hassallidins, antifungal glycolipopeptides, are widespread among cyanobacteria and are the end-product of a nonribosomal pathway ⬇️

scientific article

Higher glucose availability augments the metabolic responses of the C2C12 myotubes to exercise-like electrical pulse stimulation

scientific article

Human adenosine A2A receptor binds calmodulin with high affinity in a calcium-dependent manner.

scientific article published on February 2015

Hydrophobic pocket targeting probes for enteroviruses

scientific article published on 6 October 2015

Hyperdimensional NMR spectroscopy with nonlinear sampling

scientific article published in March 2008

Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family

scientific article published on 20 July 2017

Integrin cytoplasmic domain and pITAM compete for spleen tyrosine kinase binding

scientific article

Interaction mechanism of endogenous PP2A inhibitor protein ENSA with PP2A

scientific article

Intraresidual HNCA: an experiment for correlating only intraresidual backbone resonances

scientific article published on 01 July 2002

Letter to the editor: 1H, 13C and 15N resonance assignments of coactosin, a cytoskeletal regulatory protein

scientific article published on 01 November 2004

Loosening of globular structure under alkaline pH affects accessibility of β-lactoglobulin to tyrosinase-induced oxidation and subsequent cross-linking

scientific article published on 21 April 2011

MQ-HNCO-TROSY for the measurement of scalar and residual dipolar couplings in larger proteins: application to a 557-residue IgFLNa16-21.

scientific article

Maternal Inheritance of a Recessive RBP4 Defect in Canine Congenital Eye Disease.

scientific article published in May 2018

Measurement of residual dipolar couplings from 1Halpha to 13Calpha and 15N using a simple HNCA-based experiment

scientific article published on December 1, 2003

Mesencephalic Astrocyte-derived Neurotrophic Factor (MANF) Has a Unique Mechanism to Rescue Apoptotic Neurons

scientific article

Model of a six immunoglobulin-like domain fragment of filamin A (16-21) built using residual dipolar couplings.

scientific article

Molecular Basis of Filamin A-FilGAP Interaction and Its Impairment in Congenital Disorders Associated with Filamin A Mutations

scientific article

NMR assignment of the C-terminal ADF-H domain of an actin monomer binding protein, twinfilin

scientific article published on 22 August 2006

NMR assignment of the N-terminal domain a of the glycoprotein chaperone ERp57

scientific article published on 01 October 2005

NMR solution structure and characterization of substrate binding site of the PPIase domain of PrsA protein from Bacillus subtilis

scientific article published on 24 February 2006

NMR solution structure of calerythrin, an EF-hand calcium-binding protein from Saccharopolyspora erythraea

scientific article (publication date: June 2003)

New structural variants of aeruginosin produced by the toxic bloom forming cyanobacterium Nodularia spumigena ⬇️

scientific article (publication date: 2013)

Nostosins, Trypsin Inhibitors Isolated from the Terrestrial Cyanobacterium Nostoc sp. Strain FSN

scientific article published on 01 August 2014

On the interpretation of residual dipolar couplings as reporters of molecular dynamics

scientific article published on 01 October 2004

On the origin of residual dipolar couplings from denatured proteins

scientific article published in December 2003

Optimized pathway selection in intraresidual triple-resonance experiments

scientific article published in October 2004

Peptide binding and NMR analysis of the interaction between SAP97 PDZ2 and GluR-A: potential involvement of a disulfide bond

scientific journal article

Potato virus A genome-linked protein VPg is an intrinsically disordered molten globule-like protein with a hydrophobic core.

scientific article published on 3 June 2008

Potent Inhibitor of Human Trypsins from the Aeruginosin Family of Natural Products

scientific article

Production of High Amounts of Hepatotoxin Nodularin and New Protease Inhibitors Pseudospumigins by the Brazilian Benthic Nostoc sp. CENA543. ⬇️

scientific article published on 9 October 2017

Protein analysis by 31p NMR spectroscopy in ionic liquid: quantitative determination of enzymatically created cross-links.

scientific article

Pseudoaeruginosins, nonribosomal peptides in Nodularia spumigena

scientific article

RCD1 Coordinates Chloroplastic and Mitochondrial Electron Transfer through Interaction with ANAC Transcription Factors

Radionuclide imaging of tumor xenografts in mice using a gelatinase-targeting peptide

scientific article published on 01 January 2005

Recognition of tandem PxxP motifs as a unique Src homology 3-binding mode triggers pathogen-driven actin assembly

scientific article

Redox-dependent disulfide bond formation in SAP30L corepressor protein: Implications for structure and function

scientific journal article

Redox-dependent sodium binding by the Na(+)-translocating NADH:quinone oxidoreductase from Vibrio harveyi.

scientific article published on 15 August 2007

Resonance assignments of the 56 kDa chimeric avidin in the biotin-bound and free forms

scientific article published on 06 March 2012

SESAME-HSQC for simultaneous measurement of NH and CH scalar and residual dipolar couplings

scientific article published in 2007

SH3 domain ligand binding: What's the consensus and where's the specificity?

scientific article

Secondary metabolite from Nostoc XPORK14A inhibits photosynthesis and growth of Synechocystis PCC 6803.

scientific article published in June 2014

Simultaneous detection of amide and methyl correlations using a time shared NMR experiment: application to binding epitope mapping

scientific article

Simultaneous determination of one- and two-bond scalar and residual dipolar couplings between 13C', 13Calpha and 15N spins in proteins

scientific article published on 01 July 2006

Skeletal Dysplasia Mutations Effect on Human Filamins' Structure and Mechanosensing

scientific article

Solution structure of coactosin reveals structural homology to ADF/cofilin family proteins

scientific article published on 01 October 2004

Solution structure of the first immunoglobulin domain of human myotilin

scientific article

Solution structure of the parvulin-type PPIase domain of Staphylococcus aureus PrsA – Implications for the catalytic mechanism of parvulins

scientific article

Solution structures of the first and fourth TSR domains of F-spondin

scientific article published on 01 August 2006

Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2

scientific article published on 6 June 2016

Structural Tuning and Conformational Stability of Aromatic Oligoamide Foldamers

scientific article published on 3 November 2017

Structural and Functional Insights Into Lysostaphin-Substrate Interaction

scientific article published on 03 July 2018

Structural basis and evolutionary origin of actin filament capping by twinfilin

scientific article

Structural basis of PxxDY motif recognition in SH3 binding

scientific article

Structure of Plasmodium falciparum TRAP (thrombospondin-related anonymous protein) A domain highlights distinct features in apicomplexan von Willebrand factor A homologues

scientific article

The Interaction Mechanism of Intrinsically Disordered PP2A Inhibitor Proteins ARPP-16 and ARPP-19 With PP2A

scientific article

The cytoprotective protein MANF promotes neuronal survival independently from its role as a GRP78 cofactor

scientific article

The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site

scientific article published on July 2006

The peptide-substrate-binding domain of human collagen prolyl 4-hydroxylases. Backbone assignments, secondary structure, and binding of proline-rich peptides

scientific article

The solution structure of the amino-terminal domain of human DNA polymerase   subunit B is homologous to C-domains of AAA+ proteins

scientific article

The structure and biosynthesis of heinamides A1–A3 and B1–B5, antifungal members of the laxaphycin lipopeptide family ⬇️

scientific article

The structure of the GPIb-filamin A complex.

scientific article published on 17 November 2005

The swinholide biosynthetic gene cluster from a terrestrial cyanobacterium Nostoc sp. UHCC 0450. ⬇️

scientific article published on 17 November 2017

Towards Controlled Synthesis of Water-Soluble Gold Nanoclusters: Synthesis and Analysis

scientific article

Towards unambiguous assignment of methyl-containing residues by double and triple sensitivity-enhanced HCCmHm-TOCSY experiments

scientific article published in September 2006

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