Search filters

Authors whose works are in public domain in at least one jurisdiction

List of works by Barbara J. Wold

18-P012 The muscle gene regulatory network

article

A comparative encyclopedia of DNA elements in the mouse genome

scientific article

A highly conserved molecular switch binds MSY-3 to regulate myogenin repression in postnatal muscle

scientific journal article

A mathematical and computational framework for quantitative comparison and integration of large-scale gene expression data

scientific article

A ratiometric-based measure of gene co-expression

scientific article

Altering genotype and phenotype by DNA-mediated gene transfer

scientific article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

scientific article

Analysis of promoter-specific repression by triple-helical DNA complexes in a eukaryotic cell-free transcription system ⬇️

scientific article published on January 14, 1992

Appearance and persistence of maternal RNA sequences in sea urchin development ⬇️

scientific article published on 01 October 1977

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

scientific article

Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire

scientific article

Computation for ChIP-seq and RNA-seq studies

scientific article

Connectivity in the yeast cell cycle transcription network: inferences from neural networks

scientific article

Defining functional DNA elements in the human genome

scientific article

DifferentMRF4Knockout Alleles Differentially Disrupt Myf-5 Expression:cis-Regulatory Interactions at theMRF4/Myf-5Locus ⬇️

scientific article published on August 15, 1997

Differentiation and fiber type-specific activity of a muscle creatine kinase intronic enhancer

scientific article

Disruption of the mouse MRF4 gene identifies multiple waves of myogenesis in the myotome ⬇️

scientific article published on October 1, 1995

Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations

scientific article published on 02 July 2020

Dynamic DNA methylation across diverse human cell lines and tissues

scientific article published on 16 January 2013

Dynamic transformations of genome-wide epigenetic marking and transcriptional control establish T cell identity

scientific article published on April 2012

Dynamics of microRNA expression during mouse prenatal development

scientific article published on 23 October 2019

Effects of sequence variation on differential allelic transcription factor occupancy and gene expression

scientific article published on 2 February 2012

Enhanced signals and fast nucleic acid hybridization by microfluidic chaotic mixing

scientific article published on May 2006

Evidence for site-specific occupancy of the mitochondrial genome by nuclear transcription factors

scientific article published on 20 January 2014

Expanded encyclopaedias of DNA elements in the human and mouse genomes

scientific article published on 29 July 2020

Expression of transfected vimentin genes in differentiating murine erythroleukemia cells reveals divergent cis-acting regulation of avian and mammalian vimentin sequences

scientific article published on November 1987

Extensive Promoter-Centered Chromatin Interactions Provide a Topological Basis for Transcription Regulation ⬇️

scientific article (publication date: 20 January 2012)

From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing.

scientific article published on 3 December 2013

Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: identifying ChIP-quality p300 monoclonal antibodies

scientific article published on 12 June 2014

GA4GH: International policies and standards for data sharing across genomic research and healthcare

scientific article published on 10 November 2021

Gene expression changes in a tumor xenograft by a pyrrole-imidazole polyamide

scientific article

Genome-wide analysis reveals coating of the mitochondrial genome by TFAM.

scientific article

Genome-wide mapping of in vivo protein-DNA interactions

scientific article (publication date: 8 June 2007)

Genomic DNA as a cohybridization standard for mammalian microarray measurements

scientific article

Genomic DNA as a general cohybridization standard for ratiometric microarrays

scientific article published on January 2006

Herculin, a fourth member of the MyoD family of myogenic regulatory genes

scientific article

High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation

scientific article

INFORMATION ACCESS: Building A "GenBank" of the Published Literature

scientific article (publication date: 23 March 2001)

Identification and confirmation of a module of coexpressed genes

scientific article

Inhibition of DNA binding proteins by oligonucleotide-directed triple helix formation

scientific article published on August 1989

Inhibition of Klenow fragment DNA polymerase on double-helical templates by oligonucleotide-directed triple-helix formation

scientific article published on May 1994

Integrating and mining the chromatin landscape of cell-type specificity using self-organizing maps

scientific article published on 29 October 2013

Interleukin-2 transcription is regulated in vivo at the level of coordinated binding of both constitutive and regulated factors.

scientific article published on March 1994

Introduction and expression of a rabbit beta-globin gene in mouse fibroblasts ⬇️

scientific article published on November 1, 1979

Investigating ChIP-seq derived candidate cis-regulatory regions in two different developmental systems

scholarly article by Katherine Fisher published in August 2010

Inviability of aDNA2deletion mutant is due to the DNA damage checkpoint ⬇️

scientific article published on May 15, 2011

Isolated sequences from the linked Myf-5 and MRF4 genes drive distinct patterns of muscle-specific expression in transgenic mice.

scientific article published in May 1993

Kinetic analysis of oligodeoxyribonucleotide-directed triple-helix formation on DNA.

scientific article

Landscape of transcription in human cells

scientific article (publication date: 6 September 2012)

Large-scale quality analysis of published ChIP-seq data

scientific article

Ligation-mediated PCR for genomic sequencing and footprinting

scientific article

Mapping a multiplexed zoo of mRNA expression

scientific article

Mapping and quantifying mammalian transcriptomes by RNA-Seq

scientific article

Microglia in the Cerebral Cortex in Autism ⬇️

scientific article published on December 1, 2012

Mining gene expression data by interpreting principal components

scientific article

Multigenome DNA sequence conservation identifies Hox cis-regulatory elements

scientific article published on 3 November 2008

MyoD(-/-) satellite cells in single-fiber culture are differentiation defective and MRF4 deficient

scientific article published on August 2000

New computational approaches for analysis of cis-regulatory networks.

scientific article published in June 2002

Nucleolar Localization of myc Transcripts ⬇️

scientific article published on June 1, 1993

Occupancy maps of 208 chromatin-associated proteins in one human cell type

scientific article published on 29 July 2020

Oligonucleotide-Directed DNA Triple-Helix Formation: An Approach to Artificial Repressors? ⬇️

scientific article published on January 1, 1991

Phosphorothioate oligonucleotide-directed triple helix formation.

scientific article published in May 1994

Pitfalls of mapping high-throughput sequencing data to repetitive sequences: Piwi's genomic targets still not identified.

scientific article

Poly-L-ornithine-mediated transformation of mammalian cells

scientific article published on June 1987

RNA editing in the human ENCODE RNA-seq data

scientific article

Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements.

scientific article published on 12 March 2018

Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease

scientific article published on August 2014

Scaffolding a Caenorhabditis nematode genome with RNA-seq

scientific article

Sea urchin embryo mRNA sequences expressed in the nuclear RNA of adult tissues

scientific article published on 01 August 1978

Sequence census methods for functional genomics

scientific article published on 19 December 2007

Significance and statistical errors in the analysis of DNA microarray data

scientific article

Single-Cell Analysis Reveals Regulatory Gene Expression Dynamics Leading to Lineage Commitment in Early T Cell Development

scientific article published on 16 October 2019

Single-Cell Analysis of Regulatory Gene Expression in Quiescent and Activated Mouse Skeletal Muscle Satellite Cells ⬇️

scientific article published on November 15, 1997

Single-cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogramming

scientific article

Skeletal muscle phenotypes initiated by ectopic MyoD in transgenic mouse heart.

scientific article published in April 1992

Structural gene sets active in embryos and adult tissues of the sea urchin

scientific article published on 01 April 1976

Systematic evaluation of factors influencing ChIP-seq fidelity

scientific article

The Human Cell Atlas

scientific article

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

journal article from 'arXiv:1810.05192 [q-bio]' published in 2018

The NIH BD2K center for big data in translational genomics

scientific article

The bHLH class protein pMesogenin1 can specify paraxial mesoderm phenotypes.

scientific article

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

scientific article published on 29 July 2020

Tissue-specific expression of distinct spectrin and ankyrin transcripts in erythroid and nonerythroid cells

scientific article

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

scientific article

Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity

scientific article

Transcriptional regulation by nicotine in dopaminergic neurons ⬇️

scientific article published on August 9, 2013

Transformation of mammalian cells with genes from procaryotes and eucaryotes ⬇️

scientific article published on April 1, 1979

Transformation of mammalian cells with genes from prokaryotes and eukaryotes. 1979.

scientific article published in January 1992

p62 overexpression in breast tumors and regulation by prostate-derived Ets factor in breast cancer cells

scientific article

Paulina is supported by:

About Paulina

Help