List of works - James A. Macklin

Agricultural Informatics Contributions to Biodiversity Science and Biodiversity Assessments

scientific article published in 2017

Annotating biodiversity data via the Internet

scientific article (publication date: 20 December 2013)

Author-Driven Computable Data and Ontology Production for Taxonomists

scientific article

Authors’ attitude toward adopting a new workflow to improve the computability of phenotype publications

scientific article published on 11 January 2022

Bringing a Semantic MediaWiki Flora to Life

scientific article published in 2018

Building the "Plant Glossary"—A controlled botanical vocabulary using terms extracted from the Floras of North America and China

article

Campaigning for a Global Collections Network: Improving the digital representation and visibility of natural science collections from Latin America and the Caribbean

scientific article published in 2022

DINA: Open Source and Open Services - A Modern Approach for Sustainable Natural History Collection Management Systems

scientific article published in 2017

DINA: Open Source and Open Services - A modern approach for natural history collection management systems and research

scientific article published in 2019

DINA—Development of open source and open services for natural history collections & research

scientific article published in 2020

Darwin Cloud: Mapping real-world data to Darwin Core

scientific article published in 2017

Data Standards for the Phenology of Plant Specimens

scientific article published in 2021

Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet

article published in 2022

Digitization of US Herbaria - How close did we get to the 2020 goal?

scientific article published in 2020

Ecobiomics: Environmental metagenomic biomonitoring

scientific article published in 2019

Even Simple Habitat Ontologies are Hard to Use

scientific article published in 2020

Finding our way through phenotypes

scientific article

Fitness-for-Use-Framework-aware Data Quality workflows in Kurator

scientific article published in 2017

General introduction to DINA

scientific article published in 2018

I Know Something You Don’t Know: The annotation saga continues…

scientific article published in 2023

Incentivising use of structured language in biological descriptions: Author-driven phenotype data and ontology production

scientific article published on 07 November 2018

Integrating ABCD and DarwinCore: Toward a better foundation for biodiversity information standards

scientific article published in 2019

Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

scientific article

Kurator: Tools for Improving Fitness for Use of Biodiversity Data.

scientific article published in 2018

Mainstreaming Molecular Biodiversity: A call for a unified and interoperable framework

scientific article published on 25 June 2019

Management of Molecular Data in DINA with SeqDB

scientific article published in 2018

Measurement Recorder: developing a useful tool for making species descriptions that produces computable phenotypes

scientific article published on 01 November 2020

OTO: Ontology Term Organizer

scientific article

Preliminary Findings of Usability Studies on an Ontology-Aware Taxon-by-Character Matrix Editor

scientific article published in 2022

Representation of Object Provenance for Research on Natural Science Objects: Samples, parts and derivatives in DINA-compliant collection data management

scientific article published in 2022

Robust Integration of Biodiversity Data by Process- and State-based Representation of Object Histories and Modular Application Architecture

scientific article published in 2021

Semantic annotation of mutable data

scientific article (publication date: 2013)

Slow Science for a Sustainable Agriculture

scientific article published in 2019

Technical Considerations for a Transactional Model to Realize the Digital Extended Specimen

scientific article published in 2021

The Global Omics Observatory Network: Shaping standards for long-term molecular observation

scientific article published in 2019

The founding charter of the Omic Biodiversity Observation Network (Omic BON)

scientific article published in 2022

Training and hackathon on building biodiversity knowledge graphs

scholarly article

Update on the Brassicaceae species checklist

scientific article published on 04 March 2021

Using Wikidata and Metaphactory to Underpin an Integrated Flora of Canada

scientific article published on 08 August 2019

Using YesWorkflow hybrid queries to reveal data lineage from data curation activities

scientific article published in 2017

Which methods are the most effective in enabling novice users to participate in ontology creation? A usability study

scholarly article published on 22 June 2021

List of works by James A. Macklin

Agricultural Informatics Contributions to Biodiversity Science and Biodiversity Assessments

Annotating biodiversity data via the Internet

Author-Driven Computable Data and Ontology Production for Taxonomists

Authors’ attitude toward adopting a new workflow to improve the computability of phenotype publications

Bringing a Semantic MediaWiki Flora to Life

Building the "Plant Glossary"—A controlled botanical vocabulary using terms extracted from the Floras of North America and China

Campaigning for a Global Collections Network: Improving the digital representation and visibility of natural science collections from Latin America and the Caribbean

DINA: Open Source and Open Services - A Modern Approach for Sustainable Natural History Collection Management Systems

DINA: Open Source and Open Services - A modern approach for natural history collection management systems and research

DINA—Development of open source and open services for natural history collections & research

Darwin Cloud: Mapping real-world data to Darwin Core

Data Standards for the Phenology of Plant Specimens

Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet

Digitization of US Herbaria - How close did we get to the 2020 goal?

Ecobiomics: Environmental metagenomic biomonitoring

Even Simple Habitat Ontologies are Hard to Use

Finding our way through phenotypes

Fitness-for-Use-Framework-aware Data Quality workflows in Kurator

General introduction to DINA

I Know Something You Don’t Know: The annotation saga continues…

Incentivising use of structured language in biological descriptions: Author-driven phenotype data and ontology production

Integrating ABCD and DarwinCore: Toward a better foundation for biodiversity information standards

Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

Kurator: Tools for Improving Fitness for Use of Biodiversity Data.

Mainstreaming Molecular Biodiversity: A call for a unified and interoperable framework

Management of Molecular Data in DINA with SeqDB

Measurement Recorder: developing a useful tool for making species descriptions that produces computable phenotypes

OTO: Ontology Term Organizer

Preliminary Findings of Usability Studies on an Ontology-Aware Taxon-by-Character Matrix Editor

Representation of Object Provenance for Research on Natural Science Objects: Samples, parts and derivatives in DINA-compliant collection data management

Robust Integration of Biodiversity Data by Process- and State-based Representation of Object Histories and Modular Application Architecture

Semantic annotation of mutable data

Slow Science for a Sustainable Agriculture

Technical Considerations for a Transactional Model to Realize the Digital Extended Specimen

The Global Omics Observatory Network: Shaping standards for long-term molecular observation

The founding charter of the Omic Biodiversity Observation Network (Omic BON)

Training and hackathon on building biodiversity knowledge graphs

Update on the Brassicaceae species checklist

Using Wikidata and Metaphactory to Underpin an Integrated Flora of Canada

Using YesWorkflow hybrid queries to reveal data lineage from data curation activities

Which methods are the most effective in enabling novice users to participate in ontology creation? A usability study

YesWorkflow: A User-Oriented, Language-Independent Tool for Recovering Workflow Information from Scripts