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List of works by Jonathan Shaw

(1999) Proposal to conserve the name Cheilolejeunea against Omphalanthus (Lejeuneaceae)

scientific article (publication date: April 2011)

A Genetic Analysis of Two Recently Described Peat Moss Species, Sphagnum atlanticum and S. bergianum (Sphagnaceae)

article by Blanka Shaw et al published 1 March 2009 in Systematic Botany

A linkage map reveals a complex basis for segregation distortion in an interpopulation cross in the moss Ceratodon purpureus

scientific article

A multi-locus molecular phylogeny of the Lepidoziaceae: laying the foundations for a stable classification.

scientific article

A phylogenetic delimitation of the “Sphagnum subsecundum complex” (Sphagnaceae, Bryophyta) ⬇️

scientific article published on June 1, 2008

A phylogenetic monograph of the Sphagnum subsecundum complex (Sphagnaceae) in eastern North America

scientific article published in 2012

A phylogeny of Adelanthaceae (Jungermanniales, Marchantiophyta) based on nuclear and chloroplast DNA markers, with comments on classification, cryptic speciation and biogeography

scientific article published on 15 November 2009

A phylogeny of the northern temperate leafy liverwort genus Scapania (Scapaniaceae, Jungermanniales)

scientific article published on 06 December 2011

A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

scientific article published on 23 January 2016

A special issue of Phytotaxa dedicated to Bryophytes: The closest living relatives of early land plants

scientific article

A taxonomic reassessment of the Vittiaceae (Hypnales, Bryopsida): evidence from phylogenetic analyses of combined chloroplast and nuclear sequence data

scientific article published in October 2003

Allopolyploidy in Sphagnum mendocinum and S. papillosum (Sphagnaceae)

scientific article published in 2010

Analyses of transcriptome sequences reveal multiple ancient large-scale duplication events in the ancestor of Sphagnopsida (Bryophyta).

scientific article

Approximate Bayesian Computation Reveals the Crucial Role of Oceanic Islands for the Assembly of Continental Biodiversity.

scientific article published on 20 February 2015

Biogeographic and phylogenetic patterns in diversity of liverwort-associated endophytes

scientific article published on 01 August 2008

Bryophyte diversity and evolution: Windows into the early evolution of land plants ⬇️

scientific article published on February 25, 2011

Bryophyte phylogeny: Advancing the molecular and morphological frontiers

scholarly article by Karen S. Renzaglia et al published June 2007 in The Bryologist

Circumscription, Classification, and Taxonomy of Amblystegiaceae (Bryopsida) Inferred from Nuclear and Chloroplast DNA Sequence Data and Morphology

scientific article (publication date: February 2002)

Clonality, local population structure and gametophyte sex ratios in cryptic species of the <i>Sphagnum magellanicum</i> complex

scientific article published in 2023

Cytotype variation and allopolyploidy in North American species of the Sphagnum subsecundum complex (Sphagnaceae) ⬇️

scientific article published on December 1, 2008

Demographic history and gene flow in the peatmosses <i>Sphagnum recurvum</i> and <i>Sphagnum flexuosum</i> (Bryophyta: Sphagnaceae)

scientific article published in 2022

Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta)

scientific article

Divergent evolution and niche differentiation within the common peatmoss Sphagnum magellanicum

scientific article

Divergent selection and climate adaptation fuel genomic differentiation between sister species of <i>Sphagnum</i> (peat moss)

scientific article published in 2023

Endemism in the moss flora of North America

scientific article

Endophytic Xylaria (Xylariaceae) among liverworts and angiosperms: phylogenetics, distribution, and symbiosis

scientific article published in November 2003

Evolution of multiple paralogous adenosine kinase genes in the moss genus Hygroamblystegium: phylogenetic implications

scientific article published in May 2004

Evolution of niche preference in Sphagnum peat mosses

scientific article published on 16 December 2014

Evolution of sexual systems, dispersal strategies and habitat selection in the liverwort genus Radula

scientific article

Evolutionary origin of the latitudinal diversity gradient in liverworts

scientific article published on 08 June 2018

Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts.

scientific article

Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus

scientific article published in 2021

Formalizing morphologically cryptic biological entities: New insights from DNA taxonomy, hybridization, and biogeography in the leafy liverwort Porella platyphylla (Jungermanniopsida, Porellales) ⬇️

scientific article published on July 25, 2011

Functional trait evolution in Sphagnum peat mosses and its relationship to niche construction

scientific article published on 26 April 2019

Generation-biased gene expression in a bryophyte model system

scientific article

Genetic diversity, sexual condition, and microhabitat preference determine mating patterns in<i>S</i><i>phagnum</i>(Sphagnaceae) peat-mosses

scientific article published in 2015

Genetic structure and genealogy in the Sphagnum subsecundum complex (Sphagnaceae: Bryophyta).

scientific article published on 24 June 2008

Global Patterns of Moss Diversity: Taxonomic and Molecular Inferences

scientific article (publication date: May 2005)

Global patterns in peatmoss biodiversity

scientific article

Habitat‐adapted microbial communities mediate <i>Sphagnum</i> peatmoss resilience to warming

scientific article published in 2022

Heterogeneous genetic structure in eastern North American peat mosses (<i>Sphagnum</i>)

scientific article published in 2022

High genetic diversity in a remote island population system: sans sex

scientific article published on 21 December 2011

High morphological diversity in remote island populations of the peat mossSphagnum palustre: glacial refugium, adaptive radiation or just plasticity?

article by Hans K. Stenøien et al published May 2014 in The Bryologist

Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns

scientific article (publication date: 6 May 2014)

HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment

scientific article published on 12 July 2016

Increased diversification rates follow shifts to bisexuality in liverworts

scientific article published on February 2016

Independent Origins of Cleistocarpy in the Splachnaceae: Analyses of cpDNA Sequences and Polyphyly of the Voitioideae (Bryophyta)

scientific article published in 2002

Intercontinental Mediterranean disjunct mosses: morphological and molecular patterns

scientific article

Intercontinental genetic structure in the amphi-Pacific peatmoss<i>Sphagnum miyabeanum</i>(Bryophyta: Sphagnaceae)

scientific article published in 2013

Intercontinentally disjunct species are derived rather than relictual in the moss genus Daltonia (Bryophyta)

scientific article published on April 2010

Interploidal hybridization and mating patterns in the Sphagnum subsecundum complex

scientific article published in July 2011

Invisible in plain sight: recurrent double allopolyploidy in the African Sphagnum ×planifolium (Sphagnaceae)

scientific article published in 2014

Long-distance dispersal and barriers shape genetic structure of peatmosses (Sphagnum) across the Northern Hemisphere

Long-distance dispersal and genetic structure of natural populations: an assessment of the inverse isolation hypothesis in peat mosses

scientific article published on 12 October 2012

Microsatellite analysis of Sphagnum centrale, S. henryense, and S. palustre (Sphagnaceae)

scientific article published in 2010

Molecular Data Confirm the Presence of Anacolia menziesii (Bartramiaceae, Musci) in Southern Europe and Its Separation from Anacolia webbii

scientific article published in 2003

Molecular Phylogenetic Study of Interspecific Variation in the Moss Isothecium (Brachytheciaceae)

scientific article published in 2005

Molecular evolution and diversification of the moss family Daltoniaceae (Hookeriales, Bryophyta) with emphasis on the unravelling of the phylogeny of Distichophyllum and its allies ⬇️

scientific article published in 2012

Molecular insights into the phylogeny and subgeneric classification of Frullania Raddi (Frullaniaceae, Porellales).

scientific article published on 4 January 2009

Morphological-molecular incongruence in Sphagnum majus ssp. majus and ssp. norvegicum

scientific article published in 2022

Morphologically cryptic biological species within the liverwort Frullania asagrayana

scientific article

Morphology, anatomy, and classification of the Bryophyta

article

Moss diversity: A molecular phylogenetic analysis of genera

scientific article

Multiple paternity and sporophytic inbreeding depression in a dioicous moss species

scientific article published on 22 July 2009

Natural selection on a carbon cycling trait drives ecosystem engineering by Sphagnum (peat moss)

scientific article published in 2021

New Species of Bryaceae (Mielichhoferia, Brachymenium) from Costa Rica and Réunion

scientific article

Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics

scientific article published in 2023

Newly resolved relationships in an early land plant lineage: Bryophyta class Sphagnopsida (peat mosses)

scientific article (publication date: 6 August 2010)

North American origin and recent European establishments of the amphi-Atlantic peat moss Sphagnum angermanicum

scientific article

Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism

scientific article published on 29 November 2021

Oceanic islands are not sinks of biodiversity in spore-producing plants.

scientific article

On the taxonomic status of the enigmatic Phycolepidoziaceae (Marchantiophyta: Jungermanniales) with description of a new species, Phycolepidozia indica

scientific article (publication date: 30 June 2014)

One haploid parent contributes 100% of the gene pool for a widespread species in northwest North America ⬇️

scientific article published on December 28, 2010

One species or at least eight? Delimitation and distribution of Frullania tamarisci (L.) Dumort. s. l. (Jungermanniopsida, Porellales) inferred from nuclear and chloroplast DNA markers

scientific article published on 9 May 2010

Ordinal relationships of pleurocarpous mosses, with special emphasis on the Hookeriales

scientific article published in November 2004

Organellar phylogenomics of an emerging model system: Sphagnum (peatmoss).

scientific article

Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution

scientific article published on 08 December 2019

Origins, genetic structure, and systematics of the narrow endemic peatmosses (Sphagnum): S. guwassanense and S. triseriporum (Sphagnaceae).

scientific article published on 29 May 2013

Patterns of Molecular and Morphological Variation in Leucobryum albidum, L. glaucum, and L. juniperoideum (Bryopsida)

scientific article published in 2003

Peatmoss (Sphagnum) diversification associated with Miocene Northern Hemisphere climatic cooling?

scientific article

Phylogenetic Relationships among the Mosses Based on Heterogeneous Bayesian Analysis of Multiple Genes from Multiple Genomic Compartments

scientific article published in April 2004

Phylogenetic Relationships and Morphological Evolution in a Major Clade of Leafy Liverworts (Phylum Marchantiophyta, Order Jungermanniales): Suborder Jungermanniineae

scientific article published in 2015

Phylogenetic Significance of the rpoA Loss in the Chloroplast Genome of Mosses

scientific article (publication date: May 2005)

Phylogenetic analyses of morphological evolution in the gametophyte and sporophyte generations of the moss order Hookeriales (Bryopsida)

scientific article published on 16 January 2012

Phylogenetic inferences in the dung-moss family Splachnaceae from analyses of cpDNA sequence data and implications for the evolution of entomophily

scientific article (publication date: May 2004)

Phylogenetic structure and biogeography of the Pacific Rim clade of<i>Sphagnum</i>subgen.<i>Subsecunda</i>: haploid and allodiploid taxa

scientific article published in 2015

Phylogenetic structure in the Sphagnum recurvum complex (Bryophyta) in relation to taxonomy and geography

scientific article published on 15 September 2020

Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella , Physcomitridium and Aphanorrhegma ⬇️

scientific article published in July 2019

Phylogenomic structure and speciation in an emerging model: the <i>Sphagnum magellanicum</i> complex (Bryophyta)

scientific article published in 2022

Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway

scientific article published on 06 July 2020

Phylogeny and Classification of Lejeuneaceae Subtribe Cheilolejeuneinae (Marchantiophyta) Based on Nuclear and Plastid Molecular Markers

scholarly article by Wen Ye et al published October 2015 in Cryptogamie Bryologie

Phylogeny and morphological evolution of the amblystegiaceae (Bryopsida).

scientific article published in April 2002

Phylogeny of the leafy liverwort Ptilidium: Cryptic speciation and shared haplotypes between the Northern and Southern Hemispheres ⬇️

scientific article published on October 13, 2010

Phylogeny, Species Delimitation, and Recombination in Sphagnum Section Acutifolia

scientific article published in January 2005

Phylogeographic Patterns in Two Southern Hemisphere Species of Calyptrochaeta (Daltoniaceae, Bryophyta)

scientific article published in 2011

Phylotranscriptomic analysis of the origin and early diversification of land plants

scientific article

Pleistocene survival, regional genetic structure and interspecific gene flow among three northern peat-mosses:Sphagnum inexspectatum,S. orientaleandS. miyabeanum

article

Polarity of peatmoss (Sphagnum) evolution: who says bryophytes have no roots? ⬇️

scientific article published on December 1, 2003

Population structure in the tropical peatmoss, Sphagnum tumidulum Besch. (Sphagnaceae)

scientific article published in 2014

Radula splendida sp. nov. (Radulaceae: Marchantiophyta), a polymorphic species from New Zealand

article

Range change evolution of peatmosses (Sphagnum) within and between climate zones

scientific article published on 15 November 2018

Range size heritability and diversification patterns in the liverwort genus Radula

scientific article

Recent divergence, intercontinental dispersal and shared polymorphism are shaping the genetic structure of amphi-Atlantic peatmoss populations

scientific article published in December 2008

Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes

scientific article published on 02 April 2019

Resolving Boundaries between Species in Sphagnum Section Subsecunda Using Microsatellite Markers

scientific article published on November 2008

Selective sweeps and intercontinental migration in the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid

scientific article published in April 2005

Spatial Genetic Structure of the Abundant and Widespread Peatmoss Sphagnum magellanicum Brid

scientific article published on 9 February 2016

Spatial pattern of nucleotide polymorphism indicates molecular adaptation in the bryophyte Sphagnum fimbriatum

scientific article published on 17 June 2009

Species delimitation and biogeography of a southern hemisphere liverwort clade, Frullania subgenus Microfrullania (Frullaniaceae, Marchantiophyta).

scientific article published on 12 October 2016

Sphagnum diabolicum sp. nov. and S. magniae sp. nov.; morphological variation and taxonomy of the “S. magellanicum complex”

scientific article published in 2023

Sphagnum incundum a new species in Sphagnum subg. Acutifolia (Sphagnaceae) from boreal and arctic regions of North America

scientific article published in 2018

Sphagnum magniporosum (Sphagnaceae, subgenus Subsecunda) a new peatmoss species from Venezuela

scientific article published in 2022

Sphagnum physiology in the context of changing climate: emergent influences of genomics, modelling and host-microbiome interactions on understanding ecosystem function

scientific article

Sphagnum ×lydiae, the first allotriploid peatmoss in the northern hemisphere

scientific article published in 2019

Systematics of the Sphagnum fimbriatum Complex: Phylogenetic Relationships, Morphological Variation, and Allopolyploidy

scientific article published in 2012

Testing Controversial Alignments in Amblystegium and Related Genera (Amblystegiaceae: Bryopsida). Evidence from rDNA ITS Sequences

scientific article published in 2001

The Bryophyta (Mosses): Systematic and Evolutionary Inferences from an rps4 Gene (cpDNA) Phylogeny

scientific article published in February 2001

The Peat Moss Sphagnum cuspidatum in Australia: Microsatellites Provide a Global Perspective

scientific article published in 2011

The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project

scientific article published on 27 October 2017

The Sphagnum microbiome: new insights from an ancient plant lineage.

scientific article published on 13 May 2016

The barriers to oceanic island radiation in bryophytes: insights from the phylogeography of the moss Grimmia montana

The dark morph ofSphagnum fuscum(Schimp.) H.Klinggr. in Europe is conspecific with the North AmericanS. beothuk

The double allopolyploid<i>Sphagnum</i>×<i>falcatulum</i>(Sphagnaceae) in Tierra del Fuego, a Holantarctic perspective

scientific article published in 2013

The genetic basis of developmental abnormalities in interpopulation hybrids of the moss Ceratodon purpureus

scientific article published on 18 June 2008

The status and phylogeography of the liverwort genus Apometzgeria Kuwah. (Metzgeriaceae)

article published in 2011

Three-genome mosses: complex double allopolyploid origins for triploid gametophytes in Sphagnum.

scientific article published in April 2009

Unusual Lichens under Electricity Pylons on Zinc-Enriched Soil

scientific article published in 1999

Variation in “biodiversity value” of peatmoss species inSphagnumsectionAcutifolia(Sphagnaceae) ⬇️

scientific article published on November 1, 2005

Viral infections likely mediate microbial controls on ecosystem responses to global warming

scientific article published in 2023

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