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List of works by De Zhu Li

A comparison of different methods for preserving plant molecular materials and the effect of degraded DNA on ddRAD sequencing.

scientific article published on 22 April 2018

A new genus of temperate woody bamboos (Poaceae, Bambusoideae, Arundinarieae) from a limestone montane area of China

article

A revision of Dryopteris sect. Diclisodon (Dryopteridaceae) based on morphological and molecular evidence with description of a new species

scholarly article published in 2021

A set of novel microsatellite markers developed for a distylous species Luculia gratissima (Rubiaceae)

scientific article

A set of novel microsatellite markers developed for the traditional Tibetan medicinal plant Halenia elliptica (Gentianaceae) ⬇️

scientific article published on June 10, 2011

A worldwide phylogenetic classification of the Poaceae (Gramineae) III: An update ⬇️

scientific article published on 17 March 2022

Adiantum japonicum, a new species of the Adiantum pedatum complex (Pteridaceae) from Japan ⬇️

scholarly article published in 2021

Ancestral State Reconstruction Reveals Rampant Homoplasy of Diagnostic Morphological Characters in Urticaceae, Conflicting with Current Classification Schemes

scientific article

Applying DNA Barcodes to Identify Closely Related Species of Ferns: A Case Study of the Chinese Adiantum (Pteridaceae)

scientific article

Asymmetrical natural hybridization varies among hybrid swarms between two diploid Rhododendron species.

scientific article published on 21 April 2017

Biogeographic disjunction between eastern Asia and North America in the Adiantum pedatum complex (Pteridaceae).

scientific article

Biogeographic history of Pistacia (Anacardiaceae), emphasizing the evolution of the Madrean-Tethyan and the eastern Asian-Tethyan disjunctions.

scientific article

Born migrators: Historical biogeography of the cosmopolitan family Cannabaceae ⬇️

scientific article published on 12 December 2019

Bulbophyllum reflexipetalum (Orchidaceae, Epidendroideae, Malaxideae), a new species from Xizang, China

scientific article published on 29 August 2019

Carbon monoxide enhances the chilling tolerance of recalcitrant Baccaurea ramiflora seeds via nitric oxide-mediated glutathione homeostasis.

scientific article

Characterization of 30 microsatellite markers in distylous (Primulaceae) using HiSeq sequencing

scientific article published on 03 January 2019

China’s biodiversity hotspots revisited: A treasure chest for plants

scientific article published on 29 August 2019

Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (poaceae).

scientific article published on 4 August 2014

Cloning and characterization of a bamboo LEAFY HULL STERILE1 homologous gene

scientific article published in April 2006

Comparative analysis of plastid genomes within the Campanulaceae and phylogenetic implications

scientific article published on 14 May 2020

Comparative chloroplast genomes of eleven Schima (Theaceae) species: Insights into DNA barcoding and phylogeny

scientific article

Complementary Transcriptome and Proteome Analyses Provide Insight into the Floral Transition in Bamboo (Dendrocalamus latiflorus Munro)

scientific article published on 10 November 2020

Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses ⬇️

scientific article published on April 18, 2013

Complex evolution in Arundinarieae (Poaceae: Bambusoideae): Incongruence between plastid and nuclear GBSSI gene phylogenies ⬇️

scientific article published on March 7, 2012

Cross-species amplification and development of new microsatellite loci for Taxus wallichiana (Taxaceae).

scientific article

DNA barcoding for the discrimination of Eurasian yews (Taxus L., Taxaceae) and the discovery of cryptic species ⬇️

scientific article published on August 16, 2010

DNA barcoding herbaceous and woody plant species at a subalpine forest dynamics plot in Southwest China

article

Dark purple nectar as a foraging signal in a bird-pollinated Himalayan plant.

scientific article

De novo sequencing and characterization of the floral transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae).

scientific article

Dendrocalamus menghanensis (Poaceae, Bambusoideae), a new woody bamboo from Yunnan, China

scientific article published on 29 August 2019

Development of 20 chloroplast microsatellite primers in wuyao (Lindera aggregata, Lauraceae)

scientific article published on 26 July 2019

Development of 32 novel microsatellite loci in Juglans sigillata using genomic data

scientific article published on 27 February 2020

Differential expression networks and inheritance patterns of long non-coding RNAs in castor bean seeds

scientific article published on 31 May 2018

Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex

scientific article published on 28 April 2021

Differentiation of the traditional Chinese medicinal plants Euphorbia humifusa and E. maculata from adulterants by TaqMan real-time polymerase chain reaction.

scientific article

Discovery of the first succulent bamboo (Poaceae, Bambusoideae) in a new genus from Laos' karst areas, with a unique adaptation to seasonal drought

scientific article published on 21 August 2020

Distinct late Pleistocene subtropical-tropical divergence revealed by fifteen low-copy nuclear genes in a dominant species in South-East China

scientific article published on 18 February 2021

Distribution of Holttumochloa (Poaceae: Bambusoideae) in China with description of a new species revealed by morphological and molecular evidence

scientific article published on 13 May 2017

Distributional responses to climate change for alpine species of and endemic to the Himalaya-Hengduan Mountains

article

Documentation of plant diversity of Southeast Asia: the new role of Belt and Road Initiative

scientific article

Dryopteris jinpingensis, a critically endangered diploid new species of Dryopteridaceae from Yunnan, China

scientific article published in 2024

Environmental and Historical Determinants of Patterns of Genetic Differentiation in Wild Soybean (Glycine soja Sieb. et Zucc)

scientific article published on 8 March 2016

Episodic and GC-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes

scientific article published on 19 June 2020

Evaluation of the DNA barcodes in Dendrobium (Orchidaceae) from mainland Asia

scientific article published on 20 January 2015

Evidence for horizontal transfer of mitochondrial DNA to the plastid genome in a bamboo genus

scientific article published on 23 June 2015

Evolution and biogeographic diversification of the witch-hazel genus (Hamamelis L., Hamamelidaceae) in the Northern Hemisphere

scientific article

Evolutionary and ecological factors structure a plant–bumblebee network in a biodiversity hotspot, the Himalaya–Hengduan Mountains

scientific article published in 2021

Evolutionary constraints on disparity of ericaceous pollen grains

scientific article published on 01 May 2019

Evolutionary history of a relict conifer, Pseudotaxus chienii (Taxaceae), in south-east China during the late Neogene: old lineage, young populations

scientific article published on 01 January 2020

Expressed sequence tags (ESTs) and phylogenetic analysis of floral genes from a paleoherb species, Asarum caudigerum

scientific article published on 4 May 2006

Extensive Pyrosequencing Reveals Frequent Intra-Genomic Variations of Internal Transcribed Spacer Regions of Nuclear Ribosomal DNA ⬇️

scientific article published on August 30, 2012

Factors affecting stress tolerance in recalcitrant embryonic axes from seeds of four Quercus (Fagaceae) species native to the USA or China

scientific article

Fast, linked, and open - the future of taxonomic publishing for plants: launching the journal PhytoKeys

scientific article published in November 2010

Flowers of Cypripedium fargesii (Orchidaceae) fool flat-footed flies (Platypezidae) by faking fungus-infected foliage

scientific article

Functional consequences of temporal reversal of height dimorphism for pollen and seed dispersal in a dioecious plant

scientific article published in 2023

Functional conservation of the plant EMBRYONIC FLOWER2 gene between bamboo and Arabidopsis.

scientific article published on 31 July 2010

Functional trade-offs and the phylogenetic dispersion of seed traits in a biodiversity hotspot of the Mountains of Southwest China.

scientific article published on 25 January 2018

Genetic analysis of walnut cultivars from southwest China: Implications for germplasm improvement

scientific article published in September 2021

Genetic diversity and population structure: implications for conservation of wild soybean (Glycine soja Sieb. et Zucc) based on nuclear and chloroplast microsatellite variation

scientific article

Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome ⬇️

scientific article published on 2 December 2019

Genetic structure and differentiation in Dendrocalamus sinicus (Poaceae: Bambusoideae) populations provide insight into evolutionary history and speciation of woody bamboos

scientific article published in Scientific Reports

Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos

scientific article published on 27 May 2019

Genome skimming herbarium specimens for DNA barcoding and phylogenomics.

scientific article

Genome-wide RAD sequencing data provide unprecedented resolution of the phylogeny of temperate bamboos (Poaceae: Bambusoideae).

scientific article published on 14 September 2017

Genomic DNA Methylation Analyses Reveal the Distinct Profiles in Castor Bean Seeds with Persistent Endosperms.

scientific article published on 28 April 2016

Genomic analysis reveals rich genetic variation and potential targets of selection during domestication of castor bean from perennial woody tree to annual semi-woody crop

scientific article published on 21 October 2019

Geological and ecological factors drive cryptic speciation of yews in a biodiversity hotspot ⬇️

scientific article published on May 30, 2013

Gigantochloa glabrata (Poaceae, Bambusoideae), a new bamboo species from Yunnan, China ⬇️

scientific article

Greater than the sum of the parts: how the species composition in different forest strata influence ecosystem function

scientific article published on 02 July 2019

Herbarium phylogenomics: Resolving the generic status of the enigmatic Pseudobartsia (Orobanchaceae) ⬇️

scientific article published on 6 April 2022

High variation and strong phylogeographic pattern among cpDNA haplotypes in Taxus wallichiana (Taxaceae) in China and North Vietnam.

scientific article

High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)

scientific article published in 2011

Identification of SNP markers for inferring phylogeny in temperate bamboos (Poaceae: Bambusoideae) using RAD sequencing.

scientific article published on 13 July 2013

Identification of putative orthologous genes for the phylogenetic reconstruction of temperate woody bamboos (Poaceae: Bambusoideae).

scientific article published on 2 April 2014

Identification of the medicinal plants in Aconitum L. by DNA barcoding technique.

scientific article published on 9 March 2010

Impact of pre- and post-pollination barriers on pollen transfer and reproductive isolation among three sympatric Pedicularis (Orobanchaceae) species

scientific article published on 21 May 2018

In search of the phylogenetic affinity of the temperate woody bamboos from Madagascar, with description of a new species (Bambusoideae, Poaceae)

scientific article published on 20 July 2017

Incomplete reproductive isolation between Rhododendron taxa enables hybrid formation and persistence

scientific article published on 21 November 2018

Incongruence between nuclear and chloroplast DNA phylogenies in pedicularis section Cyathophora (Orobanchaceae)

scientific article

Indications for Three Independent Domestication Events for the Tea Plant (Camellia sinensis (L.) O. Kuntze) and New Insights into the Origin of Tea Germplasm in China and India Revealed by Nuclear Microsatellites

scientific article

Insect pollination and self-incompatibility in edible and/or medicinal crops in southwestern China, a global hotspot of biodiversity.

scientific article

Insights into the Genetic Relationships and Breeding Patterns of the African Tea Germplasm Based on nSSR Markers and cpDNA Sequences.

scientific article published on 30 August 2016

Integrating a comprehensive DNA barcode reference library with a global map of yews (Taxus L.) for forensic identification

scientific article published on 22 May 2018

Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence

scientific article

Loss of floral polymorphism in heterostylous Luculia pinceana (Rubiaceae): a molecular phylogeographic perspective ⬇️

scientific article published on July 19, 2012

Marsdenia yarlungzangboensis (Apocynaceae, Asclepiadoideae), a new species from Xizang, China

scientific article published on 29 August 2019

Microsatellite markers developed for Corallodiscus lanuginosus (Gesneriaceae) and their cross-species transferability.

scientific article published on 30 November 2012

Molecular authentication of the traditional Tibetan medicinal plant Swertia mussotii

scientific article

Molecular phylogeny of the nettle family (Urticaceae) inferred from multiple loci of three genomes and extensive generic sampling ⬇️

scientific article published on July 9, 2013

Monophyly or paraphyly--the taxonomy of Holcoglossum (Aeridinae: Orchidaceae).

scientific article

Morphological trait‐matching in plant–Hymenoptera and plant–Diptera mutualisms across an elevational gradient

scientific article published on 20 October 2021

Multi-gene analysis provides a well-supported phylogeny of Rosales ⬇️

scientific article published on April 22, 2011

Multi-locus plastid phylogenetic biogeography supports the Asian hypothesis of the temperate woody bamboos (Poaceae: Bambusoideae).

scientific article published on 23 December 2015

Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae).

scientific article

Multiple origins and a narrow genepool characterise the African tea germplasm: concordant patterns revealed by nuclear and plastid DNA markers

scientific article

Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics.

scientific article published on 21 December 2017

New distribution records of two bamboo species in Yunnan, China with description of the inflorescence for Melocalamus yunnanensis (Poaceae, Bambusoideae)

scientific article

New insights into intergeneric relationships of Hickeliinae (Poaceae: Bambusoideae) revealed by complete plastid genomes

scientific article published in 2022

Organelle Phylogenomics and Extensive Conflicting Phylogenetic Signals in the Monocot Order Poales

scientific article published on 01 January 2021

Origin of angiosperms and the puzzle of the Jurassic gap

scientific article published on 06 May 2019

PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes

scientific article published on 21 May 2019

Paraphyly of Cyrtomium (Dryopteridaceae): evidence from rbcL and trnL-F sequence data.

scientific article

Phylogenetic approaches resolve taxonomical confusion in Pedicularis (Orobanchaceae): Reinstatement of Pedicularis delavayi and discovering a new species Pedicularis milliana

scientific article published on 25 July 2018

Phylogenetic relationships of Chinese Adiantum based on five plastid markers.

scientific article

Phylogenetics of the Thamnocalamus group and its allies (Gramineae: Bambusoideae): inference from the sequences of GBSSI gene and ITS spacer.

scientific article

Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae

scientific article

Phylogenomic analyses reveal intractable evolutionary history of a temperate bamboo genus (Poaceae: Bambusoideae)

scientific article published on 31 May 2019

Phylogenomic analysis reveals multiple evolutionary origins of selfing from outcrossing in a lineage of heterostylous plants

scientific article published on 14 June 2019

Phylogenomic profiles of whole-genome duplications in Poaceae and landscape of differential duplicate retention and losses among major Poaceae lineages

scientific article published in 2024

Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution ⬇️

scientific article published on 8 April 2021

Phylogeny and biogeography of the amphi-Pacific genus Aphananthe.

scientific article

Plastid Genome Evolution in the Early-Diverging Legume Subfamily Cercidoideae (Fabaceae).

scientific article published on 8 February 2018

Plastid phylogenomics and adaptive evolution of Gaultheria series Trichophyllae (Ericaceae), a clade from sky islands of the Himalaya-Hengduan Mountains

scientific article published on 16 February 2017

Plastid phylogenomics and biogeographic analysis support a trans-Tethyan origin and rapid early radiation of Cornales in the Mid-Cretaceous

scientific article published on 21 August 2019

Plastid phylogenomics shed lights on intergeneric relationships and spatio‐temporal evolutionary history of Melocanninae (Poaceae: Bambusoideae) ⬇️

scientific article published on 15 March 2022

Plastome characteristics of Cannabaceae

scientific article published on 23 April 2018

Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide

scientific article published on 26 February 2019

Protect Third Pole's fragile ecosystem

scientific article published on 01 December 2018

Rapid Sequencing of the Bamboo Mitochondrial Genome Using Illumina Technology and Parallel Episodic Evolution of Organelle Genomes in Grasses ⬇️

scientific article published on January 17, 2012

Reciprocal herkogamy promotes disassortative mating in a distylous species with intramorph compatibility

scientific article

Resolving robust phylogenetic relationships of core Brassicaceae using genome skimming data ⬇️

scientific article published on 8 September 2020

Revisiting the phylogeny of Dipsacales: New insights from phylogenomic analyses of complete plastomic sequences ⬇️

scientific article published on 12 August 2019

Sampling strategy and potential utility of indels for DNA barcoding of closely related plant species: a case study in taxus.

scientific article

Sexual dimorphism, temporal niche differentiation, and evidence for the Jack Sprat effect in an annual dioecious plant ⬇️

scientific article published on 27 July 2021

Should genes with missing data be excluded from phylogenetic analyses?

scientific article

Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives

publication published on 17 July 2021

Species-specific partial gene duplication in <i>Arabidopsis thaliana</i> evolved novel phenotypic effects on morphological traits under strong positive selection

scientific article published on 04 December 2021

Taxonomic significance of leaf anatomy of Aniselytron (Poaceae) as an evidence to support its generic validity against Calamagrostis s. l.

scientific article published on 28 October 2005

Telling plant species apart with DNA: from barcodes to genomes

scientific article

Testing Darwin's transoceanic dispersal hypothesis for the inland nettle family (Urticaceae)

scientific article published on 21 August 2018

The Hemiparasitic Plant Phtheirospermum (Orobanchaceae) Is Polyphyletic and Contains Cryptic Species in the Hengduan Mountains of Southwest China.

scientific article published on 9 February 2018

The establishment of plants following long-distance dispersal

scientific article published in March 2023

The first complete plastid genome of Burmannia disticha L. from the mycoheterotrophic monocot family Burmanniaceae

scientific article published on 18 July 2018

The identity of Dinochloa species and enumeration of Melocalamus (Poaceae: Bambusoideae) in China

scientific article published in 2022

The monophyly of Chimonocalamus and conflicting gene trees in Arundinarieae (Poaceae: Bambusoideae) inferred from four plastid and two nuclear markers.

scientific article

The reproductive strategy of a pollinator-limited Himalayan plant, Incarvillea mairei (Bignoniaceae).

scientific article

The science and economics of ex situ plant conservation

scientific article

Towards a complete generic-level plastid phylogeny of the paleotropical woody bamboos (Poaceae: Bambusoideae)

scientific article

Towards a comprehensive phylogeny of the large temperate genus Pedicularis (Orobanchaceae), with an emphasis on species from the Himalaya-Hengduan Mountains.

scientific article published on 11 July 2015

Trait variation and functional diversity maintenance of understory herbaceous species coexisting along an elevational gradient in Yulong Mountain, Southwest China

article

Trait-Based Community Assembly along an Elevational Gradient in Subalpine Forests: Quantifying the Roles of Environmental Factors in Inter- and Intraspecific Variability.

scientific article

Transcriptome analysis reveals crucial genes involved in the biosynthesis of nervonic acid in woody Malania oleifera oilseeds

article

Two new species of <i>Fargesia</i> (Poaceae, Bambusoideae) from southwestern China

scientific article published on 10 December 2020

Using morphological, molecular and climatic data to delimitate yews along the Hindu Kush-Himalaya and adjacent regions

scientific article (publication date: 2012)

Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae)

scientific article published on 18 May 2019

Yews (Taxus) along the Hindu Kush-Himalayan region: Exploring the ethnopharmacological relevance among communities of Mongol and Caucasian origins ⬇️

scientific article published on March 7, 2013

Yushania tongpeii (Poaceae, Bambusoideae), a new bamboo species from north-eastern Yunnan, China

scientific article published on 29 August 2019

Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence

scientific article published in 2023

Inflorescences of Fargesia angustissima T.P. Yi and Yushania pauciramificans T.P. Yi (Poaceae, Bambusoideae) shed light on the taxonomy of the Sino-Himalayan alpine bamboos ⬇️

scientific article published on 9 December 2022

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