Search filters

List of works by Michael E. Pfrender

A New Reference Genome Assembly for the Microcrustacean Daphnia pulex.

scientific article

A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

scientific article published on 06 January 2020

A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria

scientific article (publication date: 30 April 2015)

A proposal to sequence the genome of a garter snake (Thamnophis sirtalis) ⬇️

scientific article

An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits

scientific article

Assessing Macroinvertebrate Biodiversity in Freshwater Ecosystems: Advances and Challenges in DNA-based Approaches ⬇️

scientific article published on September 1, 2010

Author Correction: Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys

scientific article published on 30 October 2019

Biodiversity in microbial communities: system scale patterns and mechanisms

scientific article

Biogeographic patterns and current distribution of molecular-genetic variation among populations of speckled dace, Rhinichthys osculus (Girard).

scientific article published in March 2004

Bisulfite Sequencing with Daphnia Highlights a Role for Epigenetics in Regulating Stress Response to Microcystis through Preferential Differential Methylation of Serine and Threonine Amino Acids.

scientific article published on 16 December 2016

Cast adrift on an island: introduced populations experience an altered balance between selection and drift ⬇️

scientific article published on 20 June 2012

Climate-mediated hybrid zone movement revealed with genomics, museum collection, and simulation modeling

scientific article published on 20 February 2018

Combining Natural Language Processing and Metabarcoding to Reveal Pathogen-Environment Associations

Combining natural language processing and metabarcoding to reveal pathogen-environment associations

scientific article published on 07 April 2021

Confirmation and distribution of tetrodotoxin for the first time in terrestrial invertebrates: two terrestrial flatworm species (Bipalium adventitium and Bipalium kewense).

scientific article published on 25 June 2014

Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA. ⬇️

scientific article

Conserved transcriptional responses to cyanobacterial stressors are mediated by alternate regulation of paralogous genes in Daphnia.

scientific article published on 2 April 2015

Constraint shapes convergence in tetrodotoxin-resistant sodium channels of snakes

scientific article published on March 5, 2012

Cryptic postzygotic isolation in an eruptive species of bark beetle (Dendroctonus ponderosae) ⬇️

scientific article published on December 22, 2010

Daphnia as an emerging model for toxicological genomics

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

scientific article published on 10 May 2016

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

scientific article published on 31 January 2017

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.

scientific article

Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys.

scientific article published on 11 June 2018

Environmental DNA metabarcoding: Transforming how we survey animal and plant communities.

scientific article published on 16 September 2017

Estimating fish alpha- and beta-diversity along a small stream with environmental DNA metabarcoding

scientific article published in 2018

Estimating species richness using environmental DNA.

scientific article

Evolutionary history of alpine and subalpineDaphniain western North America

Evolutionary transition from blood feeding to obligate nonbiting in a mosquito

scientific article published on 18 December 2017

Fish community assessment with eDNA metabarcoding: effects of sampling design and bioinformatic filtering

article by Nathan T. Evans et al published September 2017 in Canadian Journal of Fisheries and Aquatic Sciences

Functional biogeography as evidence of gene transfer in hypersaline microbial communities

scientific article

Functional genomics of acclimation and adaptation in response to thermal stress in Daphnia

scientific article

Gene Body Methylation Patterns in Daphnia Are Associated with Gene Family Size.

scientific article published on 26 March 2016

Gene content evolution in the arthropods

scientific article published on 23 January 2020

Genetic architecture of a feeding adaptation: garter snake (Thamnophis) resistance to tetrodotoxin bearing prey

scientific article

Genome-wide profiling of 24 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation

scientific article published on 18 August 2016

Genomics in the ecological arena

scientific article published on 11 August 2010

Genomics of environmentally induced phenotypes in 2 extremely plastic arthropods.

scientific article

Global invasion history of the agricultural pest butterfly Pieris rapae revealed with genomics and citizen science ⬇️

scientific article published on 10 September 2019

Historical Contingency in a Multigene Family Facilitates Adaptive Evolution of Toxin Resistance

scientific article

Linking genes to communities and ecosystems: Daphnia as an ecogenomic model

scientific article published in February 2012

Molecular adaptations for sensing and securing prey and insight into amniote genome diversity from the garter snake genome

scientific article published on 01 August 2018

Newly Discovered Populations of Salamanders from Siskiyou County California Represent a Species Distinct from Plethodon stormi

scientific article published in June 2005

Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method

article by Kristy Deiner et al published 2 November 2018 in Metabarcoding and Metagenomics

Parallel evolution of tetrodotoxin resistance in three voltage-gated sodium channel genes in the garter snake Thamnophis sirtalis

scientific article

Pattern of DNA Methylation in Daphnia: Evolutionary Perspective

scientific article published on 01 August 2018

Patterns of divergence across the geographic and genomic landscape of a butterfly hybrid zone associated with a climatic gradient

scientific article published on 20 July 2017

Phenotypic plasticity facilitates recurrent rapid adaptation to introduced predators ⬇️

scientific article

Predator-induced defences in Daphnia pulex: selection and evaluation of internal reference genes for gene expression studies with real-time PCR

scientific article

Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

scientific article published on 28 May 2015

Rapid evolution in response to introduced predators I: rates and patterns of morphological and life-history trait divergence ⬇️

scientific article

Rapid evolution in response to introduced predators II: the contribution of adaptive plasticity ⬇️

scientific article

Recent advances in crustacean genomics.

scientific article published on 30 October 2008

Relating perturbation magnitude to temporal gene expression in biological systems

scientific article

Reproductive isolation and environmental adaptation shape the phylogeography of mountain pine beetle (Dendroctonus ponderosae).

scientific article

SARS-CoV-2 Variant Tracking and Mitigation During In-Person Learning at a Midwestern University in the 2020-2021 School Year

scientific article published on 01 February 2022

Stabilizing selection on behavior and morphology masks positive selection on the signal in a salamander pheromone signaling complex

scientific article published on 10 March 2004

Temporal genetic stability in natural populations of the waterflea Daphnia magna in response to strong selection pressure.

scientific article

The Genomic Basis of Arthropod Diversity

article published in 2018

The Genomics of Cladoceran Physiology

The Quantitative and Molecular Genetic Architecture of a Subdivided Species

article

The ecoresponsive genome of Daphnia pulex

scientific article

The evolution of salinity tolerance in Daphnia: a functional genomics approach

scientific article published on 15 May 2012

The evolutionary origins of beneficial alleles during the repeated adaptation of garter snakes to deadly prey

scientific article

The evolutionary time machine: using dormant propagules to forecast how populations can adapt to changing environments

scientific article (publication date: May 2013)

The geographic mosaic in parallel: Matching patterns of newt tetrodotoxin levels and snake resistance in multiple predator-prey pairs

scientific article published on 21 March 2020

The molecular evolutionary dynamics of oxidative phosphorylation (OXPHOS) genes in Hymenoptera.

scientific article published on 28 December 2017

The roles of vicariance and isolation by distance in shaping biotic diversification across an ancient archipelago: evidence from a Seychelles caecilian amphibian

scientific article published on 26 August 2020

Time-course analysis of the Shewanella amazonensis SB2B proteome in response to sodium chloride shock

scientific article published on 29 June 2011

Uncovering Effects from the Structure of Metabarcode Sequences for Metagenetic and Microbiome Analysis

scientific article published on 12 March 2020

Paulina is supported by:

About Paulina

Help