List of works - Tomas Hrbek

A Multilocus Approach to Understanding Historical and Contemporary Demography of the Keystone Floodplain Species (Teleostei: Characiformes)

scientific article published on 14 August 2018

A Pan-Amazonian species delimitation: high species diversity within the genus (Anura: Bufonidae) ⬇️

scientific article published on 09 July 2018

A Taxonomic Reassessment of Cacajao melanocephalus Humboldt (1811), with the Description of Two New Species

scientific article (publication date: June 2008)

A global catalog of whole-genome diversity from 233 primate species

A molecular perspective on systematics, taxonomy and classification amazonian discus fishes of the genus symphysodon

scientific article

A new species of Piaractus (Characiformes: Serrasalmidae) from the Orinoco Basin with a redescription of Piaractus brachypomus

scientific article published on 22 May 2019

A new species of river dolphin from Brazil or: how little do we know our biodiversity

scientific article published in 2014

A phylogenetic and biogeographic perspective on the evolution of poeciliid fishes

scientific article published on 17 June 2006

A preliminary inventory of the catfishes of the lower Rio Nhamundá, Brazil (Ostariophysi, Siluriformes)

scientific article

Amazon River dolphin love fetishes: From folklore to molecular forensics

article by Waleska Gravena et al published September 2008 in Marine Mammal Science

An In Silico Comparison of Protocols for Dated Phylogenomics

scientific article published on 8 January 2018

Are rapids a barrier for floodplain fishes of the Amazon basin? A demographic study of the keystone floodplain species Colossomamacropomum (Teleostei: Characiformes).

scientific article published on 30 March 2010

Boto (-Cetacea: Iniidae) aggregations in two provisioning sites in the lower Negro River-Amazonas, Brazil: are they related?

article

Chromosomal polymorphism in two species of Hypancistrus (Siluriformes: Loricariidae): an integrative approach for understanding their biodiversity.

scientific article

Closing of the Tethys Sea and the phylogeny of Eurasian killifishes (Cyprinodontiformes: Cyprinodontidae).

scientific article published in January 2003

Color pattern variation in Cichla temensis (Perciformes: Cichlidae): resolution based on morphological, molecular, and reproductive data

scientific article published in 2012

CompCytogen of two of the smallest Amazonian fishes: Fluviphylax simplex Costa, 1996 and Fluviphylax zonatus Costa, 1996 (Cyprinodontiformes, Poeciliidae).

scientific article published on 22 December 2011

Conservation strategies for Arapaima gigas (Schinz, 1822) and the Amazonian várzea ecosystem

article

Cryptic diversity in the lizard genus Plica (Squamata): phylogenetic diversity and Amazonian biogeography ⬇️

scientific article published on 7 April 2016

Deep phylogenetic divergence and lack of taxonomic concordance in species of astronotus (cichlidae).

scientific article

Delimiting Evolutionarily Significant Units of the Fish, Piaractus brachypomus (Characiformes: Serrasalmidae), from the Orinoco and Amazon River Basins with Insight on Routes of Historical Connectivity

scientific article published on January 2015

Description of the advertisement calls of four species of Amazophrynella (Anura:Bufonidae)

scientific article published in 2018

Detecting population structure of Paleosuchus trigonatus (Alligatoridae: Caimaninae) through microsatellites markers developed by next generation sequencing

scientific article published on 09 March 2019

Diversification of the Pristimantis conspicillatus group (Anura: Craugastoridae) within distinct neotropical areas throughout the Neogene

scientific article published on 19 October 2022

Effects of Forest Fragmentation on Genetic Diversity of the Critically Endangered Primate, the Pied Tamarin (Saguinus bicolor): Implications for Conservation

scientific article published on January 2015

Elucidating a history of invasion: population genetics of pirarucu (Arapaima gigas, Actinopterygii, Arapaimidae) in the Madeira River

scientific article published in 2022

Evidence of cryptic lineages within a small South American crocodilian: the Schneider's dwarf caiman (Alligatoridae: Caimaninae)

scientific article published on 22 March 2019

Fine-mapping gene-by-diet interactions on chromosome 13 in a LG/J x SM/J murine model of obesity.

scientific article

Four in One: Cryptic Diversity in Geoffroy’s Side-Necked Turtle Phrynops geoffroanus (Schweigger 1812) (Testudines: Pleurodira: Chelidae) in Brazil

scientific article published in 2022

Genetic Evidence for Polygamy as a Mating Strategy in Caiman crocodilus

scientific article published on 31 March 2014

Genetic characterization of a new set of recombinant inbred lines (LGXSM) formed from the intercross of SM/J and LG/J inbred mouse strains

scientific article published on 01 May 2006

Genetic seascape of the threatened Caribbean elkhorn coral, Acropora palmata, on the Puerto Rico Shelf

scientific article published on June 2015

Geographic Drivers of Genetic and Plumage Color Diversity in the Blue-Crowned Manakin

scientific article published on 22 August 2023

Historical biogeography identifies a possible role of Miocene wetlands in the diversification of the Amazonian rocket frogs (Aromobatidae: Allobates ) ⬇️

scientific article

How many Pygmy Marmoset (Cebuella Gray, 1870) species are there? A taxonomic re-appraisal based on new molecular evidence

scientific article

Integrative species delimitation and biogeography of the Rhinella margaritifera species group (Amphibia, Anura, Bufonidae) suggest an intense diversification throughout Amazonia during the last 10 million years

scientific article published on 2 February 2024

Integrative taxonomy reveals a new species of pacu (Characiformes: Serrasalmidae: Myloplus) from the Brazilian Amazon

scientific article published in 2020

Kinship and social behavior of lowland tapirs (Tapirus terrestris) in a central Amazon landscape

scientific article

Life history of Xenodexia ctenolepis: implications for life history evolution in the family Poeciliidae

article

Living between rapids: genetic structure and hybridization in botos (Cetacea: Iniidae:Iniaspp.) of the Madeira River, Brazil

article

Looking to the past and the future: were the Madeira River rapids a geographical barrier to the boto (Cetacea: Iniidae)?

scholarly article by Waleska Gravena et al published 31 January 2014 in Conservation Genetics

Mapping the hidden diversity of the Geophagus sensu stricto species group (Cichlidae: Geophagini) from the Amazon basin

scientific article published on 30 November 2021

Microsatellite loci for population and parentage analysis in the Amazon River dolphin (Inia geoffrensis de Blainville, 1817)

article

Microsatellite markers for the silver arowana (Osteoglossum bicirrhosum, Osteoglossidae, Osteoglossiformes).

scientific article published on 25 February 2009

Microsatellite markers for the tambaqui (Colossoma macropomum, Serrasalmidae, Characiformes), an economically important keystone species of the Amazon River floodplain

scientific article published on 3 February 2009

Molecular diagnosis of the arowanas Osteoglossum ferreirai Kanazawa, 1966 and O. bicirrhossum (Cuvier, 1829) from the Orinoco and Amazon River basins

scientific article published in 2013

Molecular phylogeny and historical biogeography of the Aphanius (Pisces, Cyprinodontiformes) species complex of central Anatolia, Turkey

scientific article published in October 2002

Molecular systematics of tamarins with emphasis on genus <i>Tamarinus</i> (Primates, Callitrichidae)

scientific article published in 2023

Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato

scientific article

On a new species of titi monkey (Primates: Plecturocebus Byrne et al., 2016), from Alta Floresta, southern Amazon, Brazil

article

One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon.

scientific article

Patterns of diversification in the discus fishes (Symphysodon spp. Cichlidae) of the Amazon basin

scientific article published on 3 June 2008

Permanent genetic resources added to molecular ecology resources database 1 April 2012 - 31 May 2012.

scientific article published in August 2012

Phylogenetic relationships of South American alligatorids and the caiman of Madeira River

scientific article published on December 2008

Phylogenetic relationships of the New World titi monkeys (Callicebus): first appraisal of taxonomy based on molecular evidence ⬇️

scientific article

Phylogeny of the titi monkeys of the Callicebus moloch group (Pitheciidae, Primates).

scientific article

Phylogeny, molecular dating and zoogeographic history of the titi monkeys (Callicebus, Pitheciidae) of eastern Brazil

scientific article published on 2 March 2018

Phylogeographic and conservation genetic analysis of the black caiman (Melanosuchus niger)

article

Phylogeography and population genetics of the endangered Amazonian manatee, Trichechus inunguis Natterer, 1883 (Mammalia, Sirenia)

article

Plate tectonics and biogeographical patterns of the Pseudophoxinus (Pisces: Cypriniformes) species complex of central Anatolia, Turkey

scientific article published in July 2004

Polyandry in the red-headed river turtle Podocnemis erythrocephala (Testudines, Podocnemididae) in the Brazilian Amazon

scientific article published on 16 March 2010

Population genetic analysis of Arapaima gigas, one of the largest freshwater fishes of the Amazon basin: implications for its conservation

article

Population genetic structuring of the king weakfish, Macrodon ancylodon (Sciaenidae), in Atlantic coastal waters of South America: deep genetic divergence without morphological change

scientific article

Population structure of the black arowana (Osteoglossum ferreirai) in Brazil and Colombia: implications for its management

article

Quantitative trait loci for obesity- and diabetes-related traits and their dietary responses to high-fat feeding in LGXSM recombinant inbred mouse strains

scientific article published in December 2004

Reduction of Genetic Diversity of the Harpy Eagle in Brazilian Tropical Forests

scientific article published on 12 February 2016

Remarkable Geographic Structuring of Rheophilic Fishes of the Lower Araguaia River

scientific article published on 14 August 2018

Species richness and composition of snake assemblages in poorly accessible areas in the Brazilian Amazonia

scientific article published in 2020

Systematics and biogeography of the Boana albopunctata species group (Anura, Hylidae), with the description of two new species from Amazonia

scientific article published in 2021

Taxonomic review of Saguinus mystax (Spix, 1823) (Primates, Callitrichidae), and description of a new species ⬇️

scientific article published on 11 January 2023

The Munduruku marmoset: a new monkey species from southern Amazonia ⬇️

journal article from 'PeerJ' published in 2019

The landscape of tolerated genetic variation in humans and primates

The largest fish in the world's biggest river: Genetic connectivity and conservation of Arapaima gigas in the Amazon and Araguaia-Tocantins drainages

scientific article published on 16 August 2019

Titi monkey biogeography: Parallel Pleistocene spread by Plecturocebus and Cheracebus into a post-Pebas Western Amazon

scholarly article by Hazel Byrne published in July 2018

Two new surprising species of leaf-litter toad of the Rhinella margaritifera species group (Anura: Bufonidae) from the Peruvian Amazon, Loreto—Peru

scientific article published in 2022

Uncovering the diversity in the Amazophrynella minuta complex: integrative taxonomy reveals a new species of Amazophrynella (Anura, Bufonidae) from southern Peru

scientific article

List of works by Tomas Hrbek

A Multilocus Approach to Understanding Historical and Contemporary Demography of the Keystone Floodplain Species (Teleostei: Characiformes)

A Pan-Amazonian species delimitation: high species diversity within the genus (Anura: Bufonidae) ⬇️

A Taxonomic Reassessment of Cacajao melanocephalus Humboldt (1811), with the Description of Two New Species

A global catalog of whole-genome diversity from 233 primate species

A molecular perspective on systematics, taxonomy and classification amazonian discus fishes of the genus symphysodon

A new species of Piaractus (Characiformes: Serrasalmidae) from the Orinoco Basin with a redescription of Piaractus brachypomus

A new species of river dolphin from Brazil or: how little do we know our biodiversity

A phylogenetic and biogeographic perspective on the evolution of poeciliid fishes

A preliminary inventory of the catfishes of the lower Rio Nhamundá, Brazil (Ostariophysi, Siluriformes)

Amazon River dolphin love fetishes: From folklore to molecular forensics

An In Silico Comparison of Protocols for Dated Phylogenomics

Are rapids a barrier for floodplain fishes of the Amazon basin? A demographic study of the keystone floodplain species Colossomamacropomum (Teleostei: Characiformes).

Boto (-Cetacea: Iniidae) aggregations in two provisioning sites in the lower Negro River-Amazonas, Brazil: are they related?

Chromosomal polymorphism in two species of Hypancistrus (Siluriformes: Loricariidae): an integrative approach for understanding their biodiversity.

Closing of the Tethys Sea and the phylogeny of Eurasian killifishes (Cyprinodontiformes: Cyprinodontidae).

Color pattern variation in Cichla temensis (Perciformes: Cichlidae): resolution based on morphological, molecular, and reproductive data

CompCytogen of two of the smallest Amazonian fishes: Fluviphylax simplex Costa, 1996 and Fluviphylax zonatus Costa, 1996 (Cyprinodontiformes, Poeciliidae).

Conservation strategies for Arapaima gigas (Schinz, 1822) and the Amazonian várzea ecosystem

Cryptic diversity in the lizard genus Plica (Squamata): phylogenetic diversity and Amazonian biogeography ⬇️

Deep phylogenetic divergence and lack of taxonomic concordance in species of astronotus (cichlidae).

Delimiting Evolutionarily Significant Units of the Fish, Piaractus brachypomus (Characiformes: Serrasalmidae), from the Orinoco and Amazon River Basins with Insight on Routes of Historical Connectivity

Description of the advertisement calls of four species of Amazophrynella (Anura:Bufonidae)

Detecting population structure of Paleosuchus trigonatus (Alligatoridae: Caimaninae) through microsatellites markers developed by next generation sequencing

Diversification of the Pristimantis conspicillatus group (Anura: Craugastoridae) within distinct neotropical areas throughout the Neogene

Effects of Forest Fragmentation on Genetic Diversity of the Critically Endangered Primate, the Pied Tamarin (Saguinus bicolor): Implications for Conservation

Elucidating a history of invasion: population genetics of pirarucu (Arapaima gigas, Actinopterygii, Arapaimidae) in the Madeira River

Evidence of cryptic lineages within a small South American crocodilian: the Schneider's dwarf caiman (Alligatoridae: Caimaninae)

Fine-mapping gene-by-diet interactions on chromosome 13 in a LG/J x SM/J murine model of obesity.

Four in One: Cryptic Diversity in Geoffroy’s Side-Necked Turtle Phrynops geoffroanus (Schweigger 1812) (Testudines: Pleurodira: Chelidae) in Brazil

Genetic Evidence for Polygamy as a Mating Strategy in Caiman crocodilus

Genetic characterization of a new set of recombinant inbred lines (LGXSM) formed from the intercross of SM/J and LG/J inbred mouse strains

Genetic seascape of the threatened Caribbean elkhorn coral, Acropora palmata, on the Puerto Rico Shelf

Geographic Drivers of Genetic and Plumage Color Diversity in the Blue-Crowned Manakin

Historical biogeography identifies a possible role of Miocene wetlands in the diversification of the Amazonian rocket frogs (Aromobatidae: Allobates ) ⬇️

How many Pygmy Marmoset (Cebuella Gray, 1870) species are there? A taxonomic re-appraisal based on new molecular evidence

Integrative species delimitation and biogeography of the Rhinella margaritifera species group (Amphibia, Anura, Bufonidae) suggest an intense diversification throughout Amazonia during the last 10 million years

Integrative taxonomy reveals a new species of pacu (Characiformes: Serrasalmidae: Myloplus) from the Brazilian Amazon

Kinship and social behavior of lowland tapirs (Tapirus terrestris) in a central Amazon landscape

Life history of Xenodexia ctenolepis: implications for life history evolution in the family Poeciliidae

Living between rapids: genetic structure and hybridization in botos (Cetacea: Iniidae:Iniaspp.) of the Madeira River, Brazil

Looking to the past and the future: were the Madeira River rapids a geographical barrier to the boto (Cetacea: Iniidae)?

Mapping the hidden diversity of the Geophagus sensu stricto species group (Cichlidae: Geophagini) from the Amazon basin

Microsatellite loci for population and parentage analysis in the Amazon River dolphin (Inia geoffrensis de Blainville, 1817)

Microsatellite markers for the silver arowana (Osteoglossum bicirrhosum, Osteoglossidae, Osteoglossiformes).

Microsatellite markers for the tambaqui (Colossoma macropomum, Serrasalmidae, Characiformes), an economically important keystone species of the Amazon River floodplain

Molecular diagnosis of the arowanas Osteoglossum ferreirai Kanazawa, 1966 and O. bicirrhossum (Cuvier, 1829) from the Orinoco and Amazon River basins

Molecular phylogeny and historical biogeography of the Aphanius (Pisces, Cyprinodontiformes) species complex of central Anatolia, Turkey

Molecular systematics of tamarins with emphasis on genus <i>Tamarinus</i> (Primates, Callitrichidae)

Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato

On a new species of titi monkey (Primates: Plecturocebus Byrne et al., 2016), from Alta Floresta, southern Amazon, Brazil

One thousand DNA barcodes of piranhas and pacus reveal geographic structure and unrecognised diversity in the Amazon.

Patterns of diversification in the discus fishes (Symphysodon spp. Cichlidae) of the Amazon basin

Permanent genetic resources added to molecular ecology resources database 1 April 2012 - 31 May 2012.

Phylogenetic relationships of South American alligatorids and the caiman of Madeira River

Phylogenetic relationships of the New World titi monkeys (Callicebus): first appraisal of taxonomy based on molecular evidence ⬇️

Phylogeny of the titi monkeys of the Callicebus moloch group (Pitheciidae, Primates).

Phylogeny, molecular dating and zoogeographic history of the titi monkeys (Callicebus, Pitheciidae) of eastern Brazil

Phylogeographic and conservation genetic analysis of the black caiman (Melanosuchus niger)

Phylogeography and population genetics of the endangered Amazonian manatee, Trichechus inunguis Natterer, 1883 (Mammalia, Sirenia)

Plate tectonics and biogeographical patterns of the Pseudophoxinus (Pisces: Cypriniformes) species complex of central Anatolia, Turkey

Polyandry in the red-headed river turtle Podocnemis erythrocephala (Testudines, Podocnemididae) in the Brazilian Amazon

Population genetic analysis of Arapaima gigas, one of the largest freshwater fishes of the Amazon basin: implications for its conservation

Population genetic structuring of the king weakfish, Macrodon ancylodon (Sciaenidae), in Atlantic coastal waters of South America: deep genetic divergence without morphological change

Population structure of the black arowana (Osteoglossum ferreirai) in Brazil and Colombia: implications for its management

Quantitative trait loci for obesity- and diabetes-related traits and their dietary responses to high-fat feeding in LGXSM recombinant inbred mouse strains

Reduction of Genetic Diversity of the Harpy Eagle in Brazilian Tropical Forests

Remarkable Geographic Structuring of Rheophilic Fishes of the Lower Araguaia River

Species richness and composition of snake assemblages in poorly accessible areas in the Brazilian Amazonia

Systematics and biogeography of the Boana albopunctata species group (Anura, Hylidae), with the description of two new species from Amazonia

Taxonomic review of Saguinus mystax (Spix, 1823) (Primates, Callitrichidae), and description of a new species ⬇️

The Munduruku marmoset: a new monkey species from southern Amazonia ⬇️

The landscape of tolerated genetic variation in humans and primates

The largest fish in the world's biggest river: Genetic connectivity and conservation of Arapaima gigas in the Amazon and Araguaia-Tocantins drainages

Titi monkey biogeography: Parallel Pleistocene spread by Plecturocebus and Cheracebus into a post-Pebas Western Amazon

Two new surprising species of leaf-litter toad of the Rhinella margaritifera species group (Anura: Bufonidae) from the Peruvian Amazon, Loreto—Peru

Uncovering the diversity in the Amazophrynella minuta complex: integrative taxonomy reveals a new species of Amazophrynella (Anura, Bufonidae) from southern Peru