List of works - Alexandre Hassanin

150-million-year-old sea spiders (Pycnogonida: Pantopoda) of Solnhofen

A comparative approach for species delimitation based on multiple methods of multi-locus DNA sequence analysis: A case study of the genus Giraffa (Mammalia, Cetartiodactyla)

scientific article published on 13 February 2020

A novel SARS-CoV-2 related coronavirus in bats from Cambodia

scientific article published on 09 November 2021

A paradox revealed: karyotype evolution in the four-horned antelope occurs by tandem fusion (Mammalia, Bovidae, Tetracerus quadricornis).

scientific article published on February 2010

Ancient specimens and DNA contamination: a case study from the 12S rRNA gene sequence of the "Linh Duong" bovid (Pseudonovibos spiralis)

scientific article published in 2002

Assembling the Tree of Life in Europe (AToLE)

Bats host major mammalian paramyxoviruses

scientific article (publication date: 24 April 2012)

Biodiversity and phylogeny of Ammotheidae (Arthropoda: Pycnogonida)

scientific article published on 24 February 2017

Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants

scientific article published on 11 February 2013

Chromosome evolution in the subtribe Bovina (Mammalia, Bovidae): the karyotype of the Cambodian banteng (Bos javanicus birmanicus) suggests that Robertsonian translocations are related to interspecific hybridization

scientific article

Combining multiple autosomal introns for studying shallow phylogeny and taxonomy of Laurasiatherian mammals: Application to the tribe Bovini (Cetartiodactyla, Bovidae) ⬇️

scientific article published on November 15, 2012

Comparative phylogeography of African fruit bats (Chiroptera, Pteropodidae) provide new insights into the outbreak of Ebola virus disease in West Africa, 2014-2016.

scientific article

Comparative phylogeography of bamboo bats of the genus Tylonycteris (Chiroptera, Vespertilionidae) in Southeast Asia

scientific article published on 9 February 2017

Comparison of mitochondrial genome sequences of pangolins (Mammalia, Pholidota).

scientific article

Comparisons between mitochondrial genomes of domestic goat (Capra hircus) reveal the presence of numts and multiple sequencing errors

scientific article

Contamination and chimerism are perpetuating the legend of the snake-eating cow with twisted horns (Pseudonovibos spiralis). A case study of the pitfalls of ancient DNA ⬇️

scientific article published on June 1, 2003

DNA barcoding of African fruit bats (Mammalia, Pteropodidae). The mitochondrial genome does not provide a reliable discrimination between Epomophorus gambianus and Micropteropus pusillus ⬇️

scientific article published on June 24, 2011

Description of a new bat species of the tribe Scotonycterini (Chiroptera, Pteropodidae) from Southwestern Cameroon

scientific article

Description of a new species of Neoromicia (Chiroptera: Vespertilionidae) from southern Africa: A name for “N. cf. melckorum”

scientific article (publication date: 22 February 2017)

Early expression of two TdT isoforms in the hematopoietic system of the Mexican axolotl. Implications for the evolutionary origin of the N-nucleotide addition

scientific article

Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of metazoa, and consequences for phylogenetic inferences

scientific article published in April 2005

Evolution of the mitochondrial genome in mammals living at high altitude: new insights from a study of the tribe Caprini (Bovidae, Antilopinae).

scientific article published on 18 March 2009

Evolutionary history of Carnivora (Mammalia, Laurasiatheria) inferred from mitochondrial genomes

scientific article published on 16 February 2021

First insights into past biodiversity of giraffes based on mitochondrial sequences from museum specimens ⬇️

scientific article published on 18 August 2020

Four species in one: multigene analyses reveal phylogenetic patterns within Hardwicke's woolly bat, Kerivoula hardwickii-complex (Chiroptera, Vespertilionidae) in Asia ⬇️

scholarly article (2018)

Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia

scientific article

Genetic variability ofAustropotamobius italicusin the Marches region: implications for conservation

Genomic history of human monkey pox infections in the Central African Republic between 2001 and 2018

scientific article published on 22 June 2021

Has the kouprey (Bos sauveli Urbain, 1937) been domesticated in Cambodia?

scientific article published on 27 December 2005

Highly rearranged mitochondrial genome in Nycteria parasites (Haemosporidia) from bats

scientific article

Hybrid origin of the Pliocene ancestor of wild goats

scientific article

Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons

scientific article published in 2023

Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia

scientific article published on 30 April 2015

Isolates of Zaire ebolavirus from wild apes reveal genetic lineage and recombinants

scholarly article

MADS-box genes in Ginkgo biloba and the evolution of the AGAMOUS family

scientific article (publication date: May 2003)

Mitochondrial DNA variability in Giraffa camelopardalis: consequences for taxonomy, phylogeography and conservation of giraffes in West and central Africa

scientific article

Mitochondrial and nuclear phylogenies of Cervidae (Mammalia, Ruminantia): Systematics, morphology, and biogeography

scientific article

Molecular and morphological phylogenies of ruminantia and the alternative position of the moschidae

scientific article (publication date: April 2003)

Molecular evidence for the polyphyly of the genus Hemitragus (Mammalia, Bovidae)

scientific article

Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos

scientific article

Molecular phylogeny of the tribe Bovini (Bovidae, Bovinae) and the taxonomic status of the Kouprey, Bos sauveli Urbain 1937.

scientific article

Molecular systematics and biogeography of the Hemigalinae civets (Mammalia, Carnivora)

scientific article published on 23 February 2017

Molecular systematics and phylogeography of the tribe Myonycterini (Mammalia, Pteropodidae) inferred from mitochondrial and nuclear markers

scientific article

Multi-locus phylogeny of the tribe Tragelaphini (Mammalia, Bovidae) and species delimitation in bushbuck: Evidence for chromosomal speciation mediated by interspecific hybridization

scientific article published on 16 August 2018

Multilocus phylogeny and species delimitation within the genusGlauconycteris(Chiroptera, Vespertilionidae), with the description of a new bat species from the Tshopo Province of the Democratic Republic of the Congo ⬇️

scholarly article by Alexandre Hassanin et al published 22 August 2017 in Journal of Zoological Systematics and Evolutionary Research

Multiple host-switching of Haemosporidia parasites in bats

scientific article (publication date: 29 November 2007)

New insights into the systematics of Malagasy mongoose-like carnivorans (Carnivora, Eupleridae, Galidiinae) based on mitochondrial and nuclear DNA sequences

scientific article published on 21 May 2017

Nucleotide Composition of CO1 Sequences in Chelicerata (Arthropoda): Detecting New Mitogenomic Rearrangements ⬇️

scientific article published on February 24, 2012

Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes

scientific article (publication date: 2012)

Phylogeny of Arthropoda inferred from mitochondrial sequences: strategies for limiting the misleading effects of multiple changes in pattern and rates of substitution

scientific article published on 14 November 2005

Phylogeny, biogeography and character evolution in the tribe Desmodieae (Fabaceae: Papilionoideae), with special emphasis on the New Caledonian endemic genera

scientific article published on 28 September 2017

Resolving a zoological mystery: the kouprey is a real species

article

Sea spiders (Arthropoda: Pycnogonida) collected during the Madibenthos Expedition from Martinique shallow waters ⬇️

scientific article published on 12 December 2022

Studying sources of incongruence in arthropod molecular phylogenies: sea spiders (Pycnogonida) as a case study

scientific article

SuperTRI: A new approach based on branch support analyses of multiple independent data sets for assessing reliability of phylogenetic inferences

scientific article published on 18 June 2009

The SARS-CoV-2-like virus found in captive pangolins from Guangdong should be better sequenced

scientific article published on 08 May 2020

The comparative phylogeography of fruit bats of the tribe Scotonycterini (Chiroptera, Pteropodidae) reveals cryptic species diversity related to African Pleistocene forest refugia

scientific article

The complete mitochondrial genome of the African palm civet, Nandinia binotata, the only representative of the family Nandiniidae (Mammalia, Carnivora).

scientific article

The complete mitochondrial genome of the Servaline Genet, Genetta servalina, the first representative from the family Viverridae (Mammalia, Carnivora).

scientific article

The complete mitochondrial genome of the Spotted Linsang, Prionodon pardicolor, the first representative from the family Prionodontidae (Mammalia, Carnivora).

scientific article

The complete mitochondrial genome of the boky-boky, Mungotictis decemlineata, the first representative of the Malagasy carnivores (Mammalia, Carnivora, Eupleridae).

scientific article

The role of Pleistocene glaciations in shaping the evolution of polar and brown bears. Evidence from a critical review of mitochondrial and nuclear genome analyses

scientific article published on 27 May 2015

List of works by Alexandre Hassanin

150-million-year-old sea spiders (Pycnogonida: Pantopoda) of Solnhofen

A comparative approach for species delimitation based on multiple methods of multi-locus DNA sequence analysis: A case study of the genus Giraffa (Mammalia, Cetartiodactyla)

A novel SARS-CoV-2 related coronavirus in bats from Cambodia

A paradox revealed: karyotype evolution in the four-horned antelope occurs by tandem fusion (Mammalia, Bovidae, Tetracerus quadricornis).

Ancient specimens and DNA contamination: a case study from the 12S rRNA gene sequence of the "Linh Duong" bovid (Pseudonovibos spiralis)

Assembling the Tree of Life in Europe (AToLE)

Bats host major mammalian paramyxoviruses

Biodiversity and phylogeny of Ammotheidae (Arthropoda: Pycnogonida)

Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants

Chromosome evolution in the subtribe Bovina (Mammalia, Bovidae): the karyotype of the Cambodian banteng (Bos javanicus birmanicus) suggests that Robertsonian translocations are related to interspecific hybridization

Combining multiple autosomal introns for studying shallow phylogeny and taxonomy of Laurasiatherian mammals: Application to the tribe Bovini (Cetartiodactyla, Bovidae) ⬇️

Comparative phylogeography of African fruit bats (Chiroptera, Pteropodidae) provide new insights into the outbreak of Ebola virus disease in West Africa, 2014-2016.

Comparative phylogeography of bamboo bats of the genus Tylonycteris (Chiroptera, Vespertilionidae) in Southeast Asia

Comparison of mitochondrial genome sequences of pangolins (Mammalia, Pholidota).

Comparisons between mitochondrial genomes of domestic goat (Capra hircus) reveal the presence of numts and multiple sequencing errors

Contamination and chimerism are perpetuating the legend of the snake-eating cow with twisted horns (Pseudonovibos spiralis). A case study of the pitfalls of ancient DNA ⬇️

DNA barcoding of African fruit bats (Mammalia, Pteropodidae). The mitochondrial genome does not provide a reliable discrimination between Epomophorus gambianus and Micropteropus pusillus ⬇️

Description of a new bat species of the tribe Scotonycterini (Chiroptera, Pteropodidae) from Southwestern Cameroon

Description of a new species of Neoromicia (Chiroptera: Vespertilionidae) from southern Africa: A name for “N. cf. melckorum”

Early expression of two TdT isoforms in the hematopoietic system of the Mexican axolotl. Implications for the evolutionary origin of the N-nucleotide addition

Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of metazoa, and consequences for phylogenetic inferences

Evolution of the mitochondrial genome in mammals living at high altitude: new insights from a study of the tribe Caprini (Bovidae, Antilopinae).

Evolutionary history of Carnivora (Mammalia, Laurasiatheria) inferred from mitochondrial genomes

First insights into past biodiversity of giraffes based on mitochondrial sequences from museum specimens ⬇️

Four species in one: multigene analyses reveal phylogenetic patterns within Hardwicke's woolly bat, Kerivoula hardwickii-complex (Chiroptera, Vespertilionidae) in Asia ⬇️

Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia

Genetic variability ofAustropotamobius italicusin the Marches region: implications for conservation

Genomic history of human monkey pox infections in the Central African Republic between 2001 and 2018

Has the kouprey (Bos sauveli Urbain, 1937) been domesticated in Cambodia?

Highly rearranged mitochondrial genome in Nycteria parasites (Haemosporidia) from bats

Hybrid origin of the Pliocene ancestor of wild goats

Identifying the Most Probable Mammal Reservoir Hosts for Monkeypox Virus Based on Ecological Niche Comparisons

Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia

Isolates of Zaire ebolavirus from wild apes reveal genetic lineage and recombinants

MADS-box genes in Ginkgo biloba and the evolution of the AGAMOUS family

Mitochondrial DNA variability in Giraffa camelopardalis: consequences for taxonomy, phylogeography and conservation of giraffes in West and central Africa

Mitochondrial and nuclear phylogenies of Cervidae (Mammalia, Ruminantia): Systematics, morphology, and biogeography

Molecular and morphological phylogenies of ruminantia and the alternative position of the moschidae

Molecular evidence for the polyphyly of the genus Hemitragus (Mammalia, Bovidae)

Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos

Molecular phylogeny of the tribe Bovini (Bovidae, Bovinae) and the taxonomic status of the Kouprey, Bos sauveli Urbain 1937.

Molecular systematics and biogeography of the Hemigalinae civets (Mammalia, Carnivora)

Molecular systematics and phylogeography of the tribe Myonycterini (Mammalia, Pteropodidae) inferred from mitochondrial and nuclear markers

Multi-locus phylogeny of the tribe Tragelaphini (Mammalia, Bovidae) and species delimitation in bushbuck: Evidence for chromosomal speciation mediated by interspecific hybridization

Multilocus phylogeny and species delimitation within the genusGlauconycteris(Chiroptera, Vespertilionidae), with the description of a new bat species from the Tshopo Province of the Democratic Republic of the Congo ⬇️

Multiple host-switching of Haemosporidia parasites in bats

New insights into the systematics of Malagasy mongoose-like carnivorans (Carnivora, Eupleridae, Galidiinae) based on mitochondrial and nuclear DNA sequences

Nucleotide Composition of CO1 Sequences in Chelicerata (Arthropoda): Detecting New Mitogenomic Rearrangements ⬇️

Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes

Phylogeny of Arthropoda inferred from mitochondrial sequences: strategies for limiting the misleading effects of multiple changes in pattern and rates of substitution

Phylogeny, biogeography and character evolution in the tribe Desmodieae (Fabaceae: Papilionoideae), with special emphasis on the New Caledonian endemic genera

Resolving a zoological mystery: the kouprey is a real species

Sea spiders (Arthropoda: Pycnogonida) collected during the Madibenthos Expedition from Martinique shallow waters ⬇️

Studying sources of incongruence in arthropod molecular phylogenies: sea spiders (Pycnogonida) as a case study

SuperTRI: A new approach based on branch support analyses of multiple independent data sets for assessing reliability of phylogenetic inferences

The SARS-CoV-2-like virus found in captive pangolins from Guangdong should be better sequenced

The comparative phylogeography of fruit bats of the tribe Scotonycterini (Chiroptera, Pteropodidae) reveals cryptic species diversity related to African Pleistocene forest refugia

The complete mitochondrial genome of the African palm civet, Nandinia binotata, the only representative of the family Nandiniidae (Mammalia, Carnivora).

The complete mitochondrial genome of the Servaline Genet, Genetta servalina, the first representative from the family Viverridae (Mammalia, Carnivora).

The complete mitochondrial genome of the Spotted Linsang, Prionodon pardicolor, the first representative from the family Prionodontidae (Mammalia, Carnivora).

The complete mitochondrial genome of the boky-boky, Mungotictis decemlineata, the first representative of the Malagasy carnivores (Mammalia, Carnivora, Eupleridae).

The role of Pleistocene glaciations in shaping the evolution of polar and brown bears. Evidence from a critical review of mitochondrial and nuclear genome analyses