List of works by Nick Grishin

4SCOPmap: automated assignment of protein structures to evolutionary superfamilies

scientific article

A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis

scientific article

A Sequence Family Database Built on ECOD Structural Domains.

scientific article published on 5 April 2018

A comprehensive system for evaluation of remote sequence similarity detection

scientific article

A comprehensive update of the sequence and structure classification of kinases

scientific article

A database of domain definitions for proteins with complex interdomain geometry

scientific article

A method to find longevity-selected positions in the mammalian proteome

scientific article (publication date: 2012)

A minimal domain responsible for Munc13 activity

scientific article

A new Heraclides swallowtail (Lepidoptera, Papilionidae) from North America is recognized by the pattern on its neck

scientific article

A new Hermeuptychia (Lepidoptera, Nymphalidae, Satyrinae) is sympatric and synchronic with H. sosybius in southeast US coastal plains, while another new Hermeuptychia species - not hermes - inhabits south Texas and northeast Mexico

scientific article

A new family of predicted Krüppel-like factor genes and pseudogenes in placental mammals

scientific article (publication date: 2013)

A new species of Oxynetra from Mexico (Hesperiidae, Pyrginae, Pyrrhopygini)

scientific article

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

scientific article

A sequence variation (I148M) in PNPLA3 associated with nonalcoholic fatty liver disease disrupts triglyceride hydrolysis

scientific article

A switch to feeding on cycads generates parallel accelerated evolution of toxin tolerance in two clades of<i>Eumaeus</i>caterpillars (Lepidoptera: Lycaenidae)

scientific article published on 10 February 2021

A tale of two ferredoxins: sequence similarity and structural differences

scientific article

A tethered delivery mechanism explains the catalytic action of a microtubule polymerase

scientific article

AL2CO: calculation of positional conservation in a protein sequence alignment.

scientific article

AMPylation of Rho GTPases by Vibrio VopS disrupts effector binding and downstream signaling

scientific article

Accurate prediction of protein structures and interactions using a three-track neural network

scientific article

Accurate statistical model of comparison between multiple sequence alignments

scientific article published on 19 February 2008

Acidic residues important for substrate binding and cofactor reactivity in eukaryotic ornithine decarboxylase identified by alanine scanning mutagenesis

scientific article published on May 1995

Acute Hepatopancreatic Necrosis Disease-Causing Vibrio parahaemolyticus Strains Maintain an Antibacterial Type VI Secretion System with Versatile Effector Repertoires

scientific article published on 21 April 2017

Alternate pathways for folding in the flavodoxin fold family revealed by a nucleation-growth model.

scientific article

An E3 ligase possessing an iron-responsive hemerythrin domain is a regulator of iron homeostasis

scientific article

An ancient autoproteolytic domain found in GAIN, ZU5 and Nucleoporin98

scientific article

An automatic method for CASP9 free modeling structure prediction assessment

scientific article

Analysis of CASP8 targets, predictions and assessment methods.

scientific article

Assessing predictions on fitness effects of missense variants in calmodulin

scientific article published on 03 September 2019

Assessment of CASP11 contact-assisted predictions.

scientific article

Atypical angiopoietin-like protein that regulates ANGPTL3

scientific article

BOF: a novel family of bacterial OB-fold proteins

scientific article

BTLCP proteins: a novel family of bacterial transglutaminase-like cysteine proteinases

scientific article

Beclin 2 functions in autophagy, degradation of G protein-coupled receptors, and metabolism

scientific article

Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism

scientific article

Bile salt receptor complex activates a pathogenic type III secretion system

scientific article

Biochemical identification of Argonaute 2 as the sole protein required for RNA-induced silencing complex activity

scholarly article

Bioinformatics perspective on rhomboid intramembrane protease evolution and function

scientific article published on 08 July 2013

Breaking the singleton of germination protease

scientific article

C2H2 zinc finger proteins of the SP/KLF, Wilms tumor, EGR, Huckebein, and Klumpfuss families in metazoans and beyond

scientific article published on 14 July 2015

C3PO, an endoribonuclease that promotes RNAi by facilitating RISC activation

scientific article

CARF and WYL domains: ligand-binding regulators of prokaryotic defense systems

scientific article published on 30 April 2014

CASP 11 target classification.

scientific article

CASP5 assessment of fold recognition target predictions

scientific article published on January 1, 2003

CASP5 target classification

scientific article published on January 2003

CASP9 assessment of free modeling target predictions

scientific article

CASP9 target classification

scientific article

COG3926 and COG5526: a tale of two new lysozyme-like protein families

scientific article

COG4849 is a novel family of nucleotidyltransferases.

scientific article

COMPASS server for homology detection: improved statistical accuracy, speed and functionality.

scientific article

COMPASS server for remote homology inference.

scientific article

CPDadh: a new peptidase family homologous to the cysteine protease domain in bacterial MARTX toxins

scientific article published on April 2009

CREST--a large and diverse superfamily of putative transmembrane hydrolases

scientific article

ChSeq: A database of chameleon sequences.

scientific article

Classification of proteins with shared motifs and internal repeats in the ECOD database

scientific article published on 2 February 2016

Combining evolutionary and structural information for local protein structure prediction.

scientific article

Compact Structure Patterns in Proteins

scientific article

Comparative genome sequencing reveals chemotype-specific gene clusters in the toxigenic black mold Stachybotrys

scientific article

Comparative genomics in Chlamydomonas and Plasmodium identifies an ancient nuclear envelope protein family essential for sexual reproduction in protists, fungi, plants, and vertebrates

scientific article published in May 2013

Complete Genome of Achalarus lyciades, The First Representative of the Eudaminae Subfamily of Skippers

scientific article published in August 2017

Complete genome of Pieris rapae, a resilient alien, a cabbage pest, and a source of anti-cancer proteins

scientific article

Complete genomes of Hairstreak butterflies, their speciation, and nucleo-mitochondrial incongruence

scientific article

Concerted regulation of myofiber-specific gene expression and muscle performance by the transcriptional repressor Sox6

scientific article

Conserved evolutionary units in the heme-copper oxidase superfamily revealed by novel homologous protein families

scientific article published on 7 July 2014

Considering scores between unrelated proteins in the search database improves profile comparison.

scientific article

Crystal Structure of the CLOCK Transactivation Domain Exon19 in Complex with a Repressor

scientific article published on 16 June 2017

Crystal structure of Haemophilus influenzae NadR protein. A bifunctional enzyme endowed with NMN adenyltransferase and ribosylnicotinimide kinase activities

scientific article

Crystal structure of human riboflavin kinase reveals a beta barrel fold and a novel active site arch

scientific article

Crystal structures of E. coli nicotinate mononucleotide adenylyltransferase and its complex with deamido-NAD

scientific article

Cysteine-rich domains related to Frizzled receptors and Hedgehog-interacting proteins

scientific article published on 6 July 2012

DCC proteins: a novel family of thiol-disulfide oxidoreductases

scientific article published in July 2004

DOM-fold: a structure with crossing loops found in DmpA, ornithine acetyltransferase, and molybdenum cofactor-binding domain

scientific article

Deciphering a novel thioredoxin-like fold family

scholarly article by Lisa N. Kinch published in June 2003

Defining and predicting structurally conserved regions in protein superfamilies

scientific article published on 28 November 2012

Deoxyhypusine Modification of Eukaryotic Translation Initiation Factor 5A (eIF5A) Is Essential for Trypanosoma brucei Growth and for Expression of Polyprolyl-containing Proteins

scientific article published on 16 June 2015

Detecting distant homology with Meta-BASIC.

scientific article published on July 2004

Direct Demonstration That Loop1 of Scap Binds to Loop7: A CRUCIAL EVENT IN CHOLESTEROL HOMEOSTASIS.

scientific article published on 11 April 2016

Discrete-continuous duality of protein structure space.

scientific article

Discrimination between distant homologs and structural analogs: lessons from manually constructed, reliable data sets

scientific article

Double-stranded DNA bacteriophage prohead protease is homologous to herpesvirus protease

scientific article published on August 2004

ECOD: an evolutionary classification of protein domains.

scientific article

ECOD: new developments in the evolutionary classification of domains

scientific article

EDD, a novel phosphotransferase domain common to mannose transporter EIIA, dihydroxyacetone kinase, and DegV.

scientific article published on 4 January 2005

EGFR-mediated Beclin 1 phosphorylation in autophagy suppression, tumor progression, and tumor chemoresistance

scientific article

Effective scoring function for protein sequence design.

scientific article published in February 2004

Effectors of animal and plant pathogens use a common domain to bind host phosphoinositides

scientific article published on January 2013

Estimates of statistical significance for comparison of individual positions in multiple sequence alignments

scientific article

Estimating the number of protein folds and families from complete genome data

scientific article

Estimation of Uncertainties in the Global Distance Test (GDT_TS) for CASP Models

scientific article

Euclidian space and grouping of biological objects

scientific article published in November 2002

Eukaryotic domain of unknown function DUF738 belongs to Gcn5-related N-acetyltransferase superfamily.

scientific article published on 15 December 2006

Evaluation of free modeling targets in CASP11 and ROLL.

scientific article

Evolution of aminoacyl-tRNA synthetases--analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events.

scientific article

Evolution of off-lattice model proteins under ligand binding constraints.

scientific article published on 15 August 2016

Evolution of protein structures and functions

scientific article

Evolution of the regulators of G-protein signaling multigene family in mouse and human

scientific article (publication date: February 2002)

Evolutionary conservation of complexins: from choanoflagellates to mice

scientific article published on 3 September 2015

Expansion of divergent SEA domains in cell surface proteins and nucleoporin 54.

scientific article

Expansion of type II CAAX proteases reveals evolutionary origin of γ-secretase subunit APH-1

scientific article

Exploring dynamics of protein structure determination and homology-based prediction to estimate the number of superfamilies and folds.

scientific article

Fido, a novel AMPylation domain common to fic, doc, and AvrB.

scientific article

Flatworm-specific transcriptional regulators promote the specification of tegumental progenitors in Schistosoma mansoni.

scientific article published on 20 March 2018

Fold change in evolution of protein structures

scientific article

Folding domain B of protein A on a dynamically partitioned free energy landscape

scholarly article

Formation of functional cross-species heterodimers of ornithine decarboxylase

scientific article

Functional and evolutionary analysis of viral proteins containing a Rossmann-like fold.

scientific article

GGDEF domain is homologous to adenylyl cyclase

scientific article

Gaps in structurally similar proteins: towards improvement of multiple sequence alignment

scientific article

Gauging ages of tiger swallowtail butterflies using alternate SNP analyses

scientific article published in June 2022

Genetic defects in surfactant protein A2 are associated with pulmonary fibrosis and lung cancer.

scientific article

Genetic variation in ANGPTL4 provides insights into protein processing and function

scientific article published on 7 March 2009

Genome trees and the tree of life

scientific article

Genomics‐based higher classification of the species‐rich hairstreaks (Lepidoptera: Lycaenidae: Eumaeini)

Grouping of amino acid types and extraction of amino acid properties from multiple sequence alignments using variance maximization

scientific article published in November 2005

HangOut: generating clean PSI-BLAST profiles for domains with long insertions

scientific article

Homology between O-linked GlcNAc transferases and proteins of the glycogen phosphorylase superfamily

scientific article published in November 2001

HorA web server to infer homology between proteins using sequence and structural similarity.

scientific article

Human herpesvirus 1 UL24 gene encodes a potential PD-(D/E)XK endonuclease

scientific article published in March 2006

Identification of Protein Homologs and Domain Boundaries by Iterative Sequence Alignment

scientific article published on 01 January 2019

Identification of a candidate therapeutic autophagy-inducing peptide

scientific journal article

Identification of novel restriction endonuclease-like fold families among hypothetical proteins

scientific article

Identification of the acyltransferase that octanoylates ghrelin, an appetite-stimulating peptide hormone

scientific journal article

Inference of epistatic effects in a key mitochondrial protein

Insights into the evolution of longevity from the bowhead whale genome

scientific article

Kinetic and structural insights into the mechanism of AMPylation by VopS Fic domain

scientific journal article

Large-scale determination of previously unsolved protein structures using evolutionary information

scientific article

LocNES: a computational tool for locating classical NESs in CRM1 cargo proteins

scientific article published on 15 December 2014

Long-Range Epistasis Mediated by Structural Change in a Model of Ligand Binding Proteins

scientific article

Longin-like folds identified in CHiPS and DUF254 proteins: vesicle trafficking complexes conserved in eukaryotic evolution

scientific article published on November 2006

Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli

scientific article published on 23 August 2008

M2SG: mapping human disease-related genetic variants to protein sequences and genomic loci

scientific article published on 03 September 2013

MALIDUP: a database of manually constructed structure alignments for duplicated domain pairs.

scientific article published in March 2008

MALISAM: a database of structurally analogous motifs in proteins

scientific article published on 12 September 2007

MESSA: MEta-Server for protein Sequence Analysis

scientific article

MUMMALS: multiple sequence alignment improved by using hidden Markov models with local structural information

scientific article

Manual classification strategies in the ECOD database.

scientific article

Marker for type VI secretion system effectors

scientific article

Membrane protein structure predictions for exploration

scientific article

Mh1 domain of Smad is a degraded homing endonuclease

scientific article

Mitogenomes of Giant-Skipper Butterflies reveal an ancient split between deep and shallow root feeders

scientific article

Modeling of the spatial structure of eukaryotic ornithine decarboxylases

scientific article published on July 1, 1995

Molecular cloning and primary structure of Thermoactinomyces vulgaris carboxypeptidase T. A metalloenzyme endowed with dual substrate specificity

scientific article

Mutation severity spectrum of rare alleles in the human genome is predictive of disease type

scientific article published on 15 May 2020

NESdb: a database of NES-containing CRM1 cargoes

scientific article

Nuclear genomes distinguish cryptic species suggested by their DNA barcodes and ecology

scientific article

Optimization of linear disorder predictors yields tight association between crystallographic disorder and hydrophobicity

scientific article published on October 2007

PALSSE: a program to delineate linear secondary structural elements from protein structures

scientific article

PCMA: fast and accurate multiple sequence alignment based on profile consistency.

scientific article published in February 2003

PCOAT: positional correlation analysis using multiple methods.

scientific article published on 22 July 2004

PROCAIN server for remote protein sequence similarity search

scientific article

PROCAIN: protein profile comparison with assisting information.

scientific article

PROMALS web server for accurate multiple protein sequence alignments

scientific article published on 22 April 2007

PROMALS3D web server for accurate multiple protein sequence and structure alignments

scientific article published on 24 May 2008

PROMALS3D: a tool for multiple protein sequence and structure alignments

scientific article (publication date: April 2008)

PROMALS3D: multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information

scientific article published in January 2014

PROMALS: towards accurate multiple sequence alignments of distantly related proteins.

scientific article

Paramecium bursaria chlorella virus-1 encodes an unusual arginine decarboxylase that is a close homolog of eukaryotic ornithine decarboxylases

scientific article

Pclust: protein network visualization highlighting experimental data

scientific article

Peptidase family U34 belongs to the superfamily of N-terminal nucleophile hydrolases

scientific article published on May 2003

Phenotypic and genotypic analyses of genetic skin disease through the Online Mendelian Inheritance in Man (OMIM) database

scientific article published on 18 June 2009

Phenotypic categorization of genetic skin diseases reveals new relations between phenotypes, genes and pathways

scientific article published on 10 September 2009

Phosphatidylinositol phosphate kinase: a link between protein kinase and glutathione synthase folds

scientific article

Phosphorylation of innate immune adaptor proteins MAVS, STING, and TRIF induces IRF3 activation

scientific article

Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer

scientific article

Practical lessons from protein structure prediction

scientific article

Prediction of a caspase-like fold in Tannerella forsythia virulence factor PrtH.

scientific article published on 19 May 2009

Prediction of functional specificity determinants from protein sequences using log-likelihood ratios

scientific article published on 8 November 2005

Predictive and comparative analysis of Ebolavirus proteins

scientific article

Predictive sequence analysis of the Candidatus Liberibacter asiaticus proteome

scientific article

Primary structure of carboxypeptidase T: delineation of functionally relevant features in Zn-carboxypeptidase family

scientific article

ProSMoS server: a pattern-based search using interaction matrix representation of protein structures

scientific article

Profile-profile comparisons by COMPASS predict intricate homologies between protein families

scientific article

Protein domain of unknown function DUF1023 is an alpha/beta hydrolase

scientific article published in April 2005

Protein structure prediction for the male-specific region of the human Y chromosome.

scientific article

Purified NPC1 protein: II. Localization of sterol binding to a 240-amino acid soluble luminal loop

scientific article

Quality of alignment comparison by COMPASS improves with inclusion of diverse confident homologs

scientific article published on 29 January 2004

Raptor protein contains a caspase-like domain

scientific article published in October 2004

Realm of PD-(D/E)XK nuclease superfamily revisited: detection of novel families with modified transitive meta profile searches

scientific article

Reconstruction of ancestral protein sequences and its applications

scientific article

Refinement by shifting secondary structure elements improves sequence alignments

scientific article published on 13 January 2015

Remote homology between Munc13 MUN domain and vesicle tethering complexes

scientific article published on 27 June 2009

Resolving two centuries of mistaken identity: Reinterpretation of Papilio marcus Fabricius, 1787 (Lepidoptera: Nymphalidae, Hesperiidae)

scientific article published on 12 October 2022

SFESA: a web server for pairwise alignment refinement by secondary structure shifts

scientific article published on 3 September 2015

Scaling approach to the folding kinetics of large proteins.

scientific article

Searching for three-dimensional secondary structural patterns in proteins with ProSMoS.

scientific article

Sec61beta--a component of the archaeal protein secretory system

scientific article

Secreted kinase phosphorylates extracellular proteins that regulate biomineralization

scientific article

SelT, SelW, SelH, and Rdx12: genomics and molecular insights into the functions of selenoproteins of a novel thioredoxin-like family

scientific journal article

Self consistency grouping: a stringent clustering method

scientific article

Seq2Ref: a web server to facilitate functional interpretation

scientific article

Sequence and structural analyses of nuclear export signals in the NESdb database

scientific article

Sequence and structure classification of kinases

scientific article published on July 2002

Sequences and topology: from genome structure to protein structure

scientific article

Side-chain modeling with an optimized scoring function

scientific article

Site-2 protease regulated intramembrane proteolysis: sequence homologs suggest an ancient signaling cascade

scientific article published on December 2005

Skipper genome sheds light on unique phenotypic traits and phylogeny

scientific article published on 27 August 2015

Speciation in Cloudless Sulphurs Gleaned from Complete Genomes

scientific article

Speciation in North AmericanJunoniafrom a genomic perspective

scientific article

Species richness of Eurasian Zephyrus hairstreaks (Lepidoptera: Lycaenidae: Theclini) with implications on historical biogeography: An NDM/VNDM approach

scientific article published on 19 January 2018

Spectrum of diverse genomic alterations define non-clear cell renal carcinoma subtypes

scientific article published on 17 November 2014

Statistics of random protein superpositions: p-values for pairwise structure alignment.

scientific article

Structural Basis for Converting a General Transcription Factor into an Operon-Specific Virulence Regulator

scientific article

Structural analysis and functional implications of the negative mTORC1 regulator REDD1

scientific article

Structural characterization of a human cytosolic NMN/NaMN adenylyltransferase and implication in human NAD biosynthesis

scientific article (publication date: 11 April 2003)

Structural classification of thioredoxin-like fold proteins.

scientific article

Structural classification of zinc fingers: survey and summary

scientific article

Structural drift: a possible path to protein fold change

scientific article published on 16 December 2004

Structural evolution of proteinlike heteropolymers

scientific article published on 23 December 2014

Structurally analogous proteins do exist!

scientific article published in July 2004

Structure and Mechanism of a Eukaryotic FMN Adenylyltransferase

scientific article

Structure of a conserved hypothetical protein SA1388 from S. aureus reveals a capped hexameric toroid with two PII domain lids and a dinuclear metal center

scientific article

Structure of human nicotinamide/nicotinic acid mononucleotide adenylyltransferase. Basis for the dual substrate specificity and activation of the oncolytic agent tiazofurin

scientific article

Structure prediction and active site analysis of the metal binding determinants in gamma -glutamylcysteine synthetase

scientific article published on 29 August 2001

Structure prediction for CASP8 with all-atom refinement using Rosetta.

scientific article

Structure similarity measure with penalty for close non-equivalent residues

scientific article published on 25 March 2009

Substrate and functional diversity of lysine acetylation revealed by a proteomics survey

scientific article

Succination of Keap1 and activation of Nrf2-dependent antioxidant pathways in FH-deficient papillary renal cell carcinoma type 2.

scientific article

Tagaturonate-fructuronate epimerase UxaE, a novel enzyme in the hexuronate catabolic network in Thermotoga maritima

scientific article published on 23 August 2012

Targeting the Conserved Fusion Loop of HAP2 Inhibits the Transmission of Plasmodium berghei and falciparum

scientific article

The ABC transporters in Candidatus Liberibacter asiaticus

scientific article published on 31 July 2012

The Ancient Gamete Fusogen HAP2 Is a Eukaryotic Class II Fusion Protein

scientific article published on February 2017

The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria

scientific article

The P5 protein from bacteriophage phi-6 is a distant homolog of lytic transglycosylases

scientific article

The Penaincisalia amatista species-group (Lepidoptera: Lycaenidae, Eumaeini) in Colombia, insights from mtDNA barcodes and the description of a new species

article

The Rho GTPase inactivation domain in Vibrio cholerae MARTX toxin has a circularly permuted papain-like thiol protease fold

scientific article published in November 2009

The WAVE Regulatory Complex Links Diverse Receptors to the Actin Cytoskeleton

scientific article

The Zn-peptidase superfamily: functional convergence after evolutionary divergence

scientific article

The complete mitochondrial genome of Lerema accius and its phylogenetic implications

scientific article published on 7 January 2016

The complete mitochondrial genome of Papilio glaucus and its phylogenetic implications

scientific article published on 14 June 2015

The complete mitochondrial genome of a skipper Burara striata (Lepidoptera: Hesperiidae).

scientific article published on 10 March 2017

The complete mitogenome of Achalarus lyciades (Lepidoptera: Hesperiidae)

scientific article published on 30 August 2016

The conserved plant sterility gene HAP2 functions after attachment of fusogenic membranes in Chlamydomonas and Plasmodium gametes

scientific article published on 26 March 2008

The finger domain of the human deubiquitinating enzyme HAUSP is a zinc ribbon.

scientific article published on 8 August 2004

The first complete genomes of Metalmarks and the classification of butterfly families

scientific article published on 27 July 2017

The human Ago2 MC region does not contain an eIF4E-like mRNA cap binding motif

scientific article published on 21 January 2009

The lipodystrophy protein seipin is found at endoplasmic reticulum lipid droplet junctions and is important for droplet morphology

scientific article

The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation

scientific article

The subunit interfaces of oligomeric enzymes are conserved to a similar extent to the overall protein sequences

scientific article published on December 1994

The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase

scientific article

The “Super Mutant” of Yeast FMN Adenylyltransferase Enhances the Enzyme Turnover Rate by Attenuating Product Inhibition

scientific article

Thermolysin and mitochondrial processing peptidase: how far structure-functional convergence goes

scientific article

Three-dimensional structure of the rSly1 N-terminal domain reveals a conformational change induced by binding to syntaxin 5

scientific journal article

Tiger Swallowtail Genome Reveals Mechanisms for Speciation and Caterpillar Chemical Defense

scientific article published on 12 February 2015

Two new species of Clito from South America and a revision of the Clito littera group (Lepidoptera: Hesperiidae: Pyrginae)

scientific article (publication date: 15 September 2014)

Two tricks in one bundle: helix-turn-helix gains enzymatic activity

scientific article published on June 2000

Type VI Secretion System Toxins Horizontally Shared between Marine Bacteria

scientific article published on 25 August 2015

Ubiquitin-induced oligomerization of the RNA sensors RIG-I and MDA5 activates antiviral innate immune response

scientific article published on 14 June 2012

Unexpected diversity in Shisa-like proteins suggests the importance of their roles as transmembrane adaptors

scientific article published on 18 November 2011

Unusually rapid evolution of Neuroligin-4 in mice

scientific article

Using homology relations within a database markedly boosts protein sequence similarity search.

scientific article

Using protein design for homology detection and active site searches

scientific article

Vibrio type III effector VPA1380 is related to the cysteine protease domain of large bacterial toxins

scientific article

What one genus of showy moths can say about migration, adaptation, and wing pattern

scientific article published on 17 April 2024

When COI barcodes deceive: complete genomes reveal introgression in hairstreaks

scientific article published in February 2017