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List of works by Naomi Ward

An automated phylogenetic tree-based small subunit rRNA taxonomy and alignment pipeline (STAP).

scientific article

Analysis of Genome Content Evolution in PVC Bacterial Super-Phylum: Assessment of Candidate Genes Associated with Cellular Organization and Lifestyle ⬇️

scientific article published on January 1, 2012

Analysis of the Duodenal Microbiome in Autistic Individuals: Association With Carbohydrate Digestion

scientific article published on 2 November 2016

Antibiotic Treatment Induces Long-lasting Changes in the Fecal Microbiota that Protect Against Colitis

scientific article published on 7 September 2016

Characterization of bacterial communities associated with deep-sea corals on Gulf of Alaska seamounts

scientific article published in February 2006

Characterization of the intestinal microbiota of two Antarctic notothenioid fish species

scientific article

Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus

scientific article

Comparison of bacterial communities in New England Sphagnum bogs using terminal restriction fragment length polymorphism (T-RFLP).

scientific article published on 31 May 2006

Complete Genome Sequence of Coprothermobacter proteolyticus DSM 5265

scientific article

Complete Genome Sequence of the Extreme Thermophile Dictyoglomus thermophilum H-6-12

scientific article published on 20 February 2014

Complete genome sequence of the Q-fever pathogen Coxiella burnetii

scientific article

Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum

scientific article

Detecting Microbial Dysbiosis Associated with Pediatric Crohn Disease Despite the High Variability of the Gut Microbiota

scientific article published on 19 January 2016

Draft Genome Sequence of the Arsenate-Respiring Bacterium Chrysiogenes arsenatis Strain DSM 11915.

scientific article

Draft Genome Sequence of the Pyridinediol-Fermenting Bacterium Synergistes jonesii 78-1

scientific article

Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic

scientific article

Genome Sequence of a Sulfate-Reducing Thermophilic Bacterium, Thermodesulfobacterium commune DSM 2178T (Phylum Thermodesulfobacteria)

scientific article

Genome Sequence of the PCE-Dechlorinating Bacterium Dehalococcoides ethenogenes

scientific article

Genome Sequence of the Sulfate-Reducing Thermophilic Bacterium Thermodesulfovibrio yellowstonii Strain DSM 11347T (Phylum Nitrospirae)

scientific article

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

scientific article

Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment

scientific article

Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis

scientific article

Genome-wide influence of indel Substitutions on evolution of bacteria of the PVC superphylum, revealed using a novel computational method

scientific article

Genomic analysis of Hyphomonas neptunium contradicts 16S rRNA gene-based phylogenetic analysis: implications for the taxonomy of the orders 'Rhodobacterales' and Caulobacterales

scientific article

Genomic and Experimental Evidence Suggests that Verrucomicrobium spinosum Interacts with Eukaryotes

scientific article

Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath)

scientific article

Global and Targeted Lipid Analysis of Gemmata obscuriglobus Reveals the Presence of Lipopolysaccharide, a Signature of the Classical Gram-Negative Outer Membrane

scientific article

Harnessing the power of microbial genomics for exploring exceptions and shifting perceptions

scientific article

How genomics has affected the concept of microbiology

scientific article

Microbiome Composition in Both Wild-Type and Disease Model Mice Is Heavily Influenced by Mouse Facility

article

Mind the PVCs

scientific article published in May 2014

New directions and interactions in metagenomics research

scientific article

Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia-oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names 'Nitrosococcus halophilus' and 'Nitrosomonas mobilis'.

scientific article

Paths to GI Research in the Wild West: Tales From Wyoming

scientific article published on July 2016

Planctomyces

scientific article published in 2015

Planctomycetaceae

scientific article published in 2015

Planctomycetia class. nov.

scientific article published in 2015

Prosthecomicrobium

scientific article published in 2015

Prosthecomicrobium Staley 1968, 1940AL emend. Staley 1984, 304

Proteins Related to the Type I Secretion System Are Associated with Secondary SecA_DEAD Domain Proteins in Some Species of Planctomycetes, Verrucomicrobia, Proteobacteria, Nitrospirae and Chlorobi

scientific article published on June 2015

Pyrosequencing of plastid 23S rRNA genes reveals diverse and dynamic cyanobacterial and algal populations in two eutrophic lakes

scientific article published on 13 July 2012

Random transposon mutagenesis of Verrucomicrobium spinosum DSM 4136(T).

scientific article

Sequenced strains must be saved from extinction

scientific article published in Nature

Spatially segregated transcription and translation in cells of the endomembrane-containing bacterium Gemmata obscuriglobus

scientific article

The Genera Prosthecomicrobium and Ancalomicrobium

The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms)

scientific article

The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough

scientific article

The minimum information about a genome sequence (MIGS) specification

scientific article

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

scientific article

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