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List of works by Panayiota Poirazi

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 1.

scientific article published on 18 August 2017

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3.

scientific article

A Novel and Simple Spike Sorting Implementation

scientific article

A Simple Method to Simultaneously Detect and Identify Spikes from Raw Extracellular Recordings

scientific article published on 2 December 2015

A compressed sensing perspective of hippocampal function

scientific article

A computational exploration of bacterial metabolic diversity identifying metabolic interactions and growth-efficient strain communities

scientific article

A computational study on how theta modulated inhibition can account for the long temporal windows in the entorhinal-hippocampal loop

scientific article published on 24 February 2015

A deep learning framework for neuroscience

scientific article published on 28 October 2019

A new microRNA target prediction tool identifies a novel interaction of a putative miRNA with CCND2.

scientific article published on September 2012

A simulation study on the effects of dendritic morphology on layer V prefrontal pyramidal cell firing behavior.

scientific article

Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell

scientific article published in March 2003

Balancing family with a successful career in neuroscience

scientific article

Basal tree complexity shapes functional pathways in the prefrontal cortex

scientific article published on 12 July 2017

Breakdown of spatial coding and interneuron synchronization in epileptic mice

scientific article published on 06 January 2020

Breakdown of spatial coding and neural synchronization in epilepsy

CREB regulates excitability and the allocation of memory to subsets of neurons in the amygdala

scientific article

Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators

Challenging the point neuron dogma: FS basket cells as 2-stage nonlinear integrators

scientific article published on 14 August 2019

Choice and value flexibility jointly contribute to the capacity of a subsampled quadratic classifier

scientific article published on May 2000

Classification capacity of a modular neural network implementing neurally inspired architecture and training rules

scientific article published in May 2004

CoMuS: simulating coalescent histories and polymorphic data from multiple species

scientific article

Coding and decoding with dendrites

scientific article published on 31 May 2013

Computational Identification of miRNAs Involved in Cancer

article published in 2010

Computational modeling of the effects of amyloid-beta on release probability at hippocampal synapses

scientific article published on 25 January 2013

Contribution of apical and basal dendrites to orientation encoding in mouse V1 L2/3 pyramidal neurons

scientific article published on 26 November 2019

Dendrites of DG granule cells contribute to pattern separation by controlling sparsity

Dendrites of dentate gyrus granule cells contribute to pattern separation by controlling sparsity

scientific article published on 26 October 2016

Dendritic action potentials and computation in human layer 2/3 cortical neurons

scientific article published on 01 January 2020

Dendritic nonlinearities enable PFC microcircuits to serve as predictive modules of persistent activity.

scientific article published on 8 July 2013

Dendritic nonlinearities reduce network size requirements and mediate ON and OFF states of persistent activity in a PFC microcircuit model

scientific article (publication date: July 2014)

Dentate Gyrus circuitry features improve performance of sparse approximation algorithms

scientific article published on 30 January 2015

Differential effects of corticosterone on the slow afterhyperpolarization in the basolateral amygdala and CA1 region: possible role of calcium channel subunits.

scientific article published on 12 December 2007

Distinguishing Linear vs. Non-Linear Integration in CA1 Radial Oblique Dendrites: It's about Time

scientific article published on 14 November 2011

Don't use a cannon to kill the ... miRNA mosquito

scientific article published on 10 March 2014

Emerging applications of read profiles towards the functional annotation of the genome

scientific article

Encoding of spatio-temporal input characteristics by a CA1 pyramidal neuron model

scientific article

Finding cancer-associated miRNAs: methods and tools

scientific article published on September 2011

GABAergic Interneurons with Nonlinear Dendrites: From Neuronal Computations to Memory Engrams

scientific article

GluA2 mRNA distribution and regulation by miR-124 in hippocampal neurons

scientific article published on 28 April 2014

Hotspots of dendritic spine turnover facilitate clustered spine addition and learning and memory

scientific article published on 29 January 2018

Illuminating dendritic function with computational models

scientific article published on 11 May 2020

Impact of active dendrites and structural plasticity on the memory capacity of neural tissue

scientific article

Improved grading and survival prediction of human astrocytic brain tumors by artificial neural network analysis of gene expression microarray data

scientific article

Individualized markers optimize class prediction of microarray data

scientific article

Induction and modulation of persistent activity in a layer V PFC microcircuit model.

scientific article published on 09 October 2013

Inside the brain of a neuron

scientific article published on September 2006

Introducing the Dendrify framework for incorporating dendrites to spiking neural networks

scientific article published in 2023

Introduction to the Computational Neuroscience Special Section

scientific article published on 01 April 2017

In Vivo Imaging of Dentate Gyrus Mossy Cells in Behaving Mice

scientific article published on 5 January 2017

Large-Scale 3D Two-Photon Imaging of Molecularly Identified CA1 Interneuron Dynamics in Behaving Mice

scientific article published on 25 September 2020

Linking Memories across Time via Neuronal and Dendritic Overlaps in Model Neurons with Active Dendrites

scientific article

Mature miRNA identification via the use of a Naive Bayes classifier

MatureBayes: a probabilistic algorithm for identifying the mature miRNA within novel precursors

scientific article

Mechanisms underlying the emergence of Up and Down states in a model PFC microcircuit.

scientific article

Memory Beyond Synaptic Plasticity: The Role of Intrinsic Neuronal Excitability

scholarly article published 12 June 2012

Memory Capacity of Linear vs. Nonlinear Models of Dendritic Integration ⬇️

MiRduplexSVM: A High-Performing MiRNA-Duplex Prediction and Evaluation Methodology

scientific article published on 11 May 2015

MicroRNAs and cancer-the search begins!

scientific article published on January 2009

Modeling regulatory cascades using Artificial Neural Networks: the case of transcriptional regulatory networks shaped during the yeast stress response

scientific article published on 20 June 2013

Modeling stress-induced adaptations in Ca2+ dynamics

article

Modulatory effects of inhibition on persistent activity in a cortical microcircuit model.

scientific article published on 31 January 2014

Neurofibromin regulates corticostriatal inhibitory networks during working memory performance

scientific article

Neuromatch Academy: a 3-week, online summer school in computational neuroscience

scientific article published in 2022

Opening up: open access publishing, data sharing, and how they can influence your neuroscience career

scientific article published on 7 March 2016

Optically Induced Calcium-Dependent Gene Activation and Labeling of Active Neurons Using CaMPARI and Cal-Light.

scientific article published on 24 May 2019

Pattern separation in the hippocampus through the eyes of computational modeling

scientific article published on 18 March 2017

Prediction of miRNA targets

scientific article published on January 2015

Prediction of novel microRNA genes in cancer-associated genomic regions--a combined computational and experimental approach

scientific article published on 25 March 2009

Predictive Features of Persistent Activity Emergence in Regular Spiking and Intrinsic Bursting Model Neurons ⬇️

scientific article published on April 26, 2012

Pyramidal neuron as two-layer neural network

scientific article published in March 2003

REMOD: A Tool for Analyzing and Remodeling the Dendritic Architecture of Neural Cells

scientific article published in January 2015

Reflections on the past two decades of neuroscience

scientific article published on 02 September 2020

Synaptic Clustering and Memory Formation

scientific article published on 06 December 2019

Synaptic clustering within dendrites: an emerging theory of memory formation

scientific article

Synaptic plasticity in dendrites: complications and coping strategies

scientific article

The FENS-Kavli Network for Excellence in Neuroscience: Advancing science through collaboration and advocacy.

scientific article

The Hitchhiker's Guide to a Neuroscience Career.

scientific article published in May 2015

The perfect grant and how to get it

scientific article published in Nature

The road to independence: how to get funding in neuroscience

scientific article published on 10 January 2016

The role of microcircuits in the pre-frontal cortex in detecting and encoding temporally patterned information.

scientific article published on 18 December 2015

Two Distinct Sets of Ca2+ and K+ Channels Are Activated at Different Membrane Potentials by the Climbing Fiber Synaptic Potential in Purkinje Neuron Dendrites

scientific article published on 10 January 2019

Use of artificial neural networks and a gamma-concept-based approach to model growth of and bacteriocin production by Streptococcus macedonicus ACA-DC 198 under simulated conditions of Kasseri cheese production

scientific article published on 8 December 2006

Utilization of SSCprofiler to Predict a New miRNA Gene

article

Vasoactive Intestinal Polypeptide-Expressing Interneurons in the Hippocampus Support Goal-Oriented Spatial Learning

scientific article published on 31 January 2019

…with Love, from Post to Pre.

scientific article published in September 2017

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