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List of works by Judith Glynn

A robust SNP barcode for typing Mycobacterium tuberculosis complex strains.

scientific article

A systematic review and meta-analysis of molecular epidemiological studies of tuberculosis: development of a new tool to aid interpretation

scientific article published on August 2009

A systematic review and meta-analysis of seroprevalence surveys of ebolavirus infection

scientific article published on 31 January 2017

Adult mortality and probable cause of death in rural northern Malawi in the era of HIV treatment

scientific article published in August 2012

Age at menarche, schooling, and sexual debut in northern Malawi

scientific article published on 9 December 2010

Age-specific incidence of Ebola virus disease

scientific article published in August 2015

Age-specific mortality patterns in HIV-infected individuals: a comparative analysis of African community study data

scientific article

An Assessment of Childbearing Preferences in Northern Malawi

scientific article published on June 2015

An integrated whole genome analysis of Mycobacterium tuberculosis reveals insights into relationship between its genome, transcriptome and methylome

scholarly article by Paula J Gomez-Gonzalez et al published 26 March 2019 in Scientific Reports

Antiretroviral treatment cohort analysis using time-updated CD4 counts: assessment of bias with different analytic methods

scientific article

Assessing the validity of and factors that influence accurate self-reporting of HIV status after testing: a population-based study

scientific article published on 17 February 2020

Assessing the validity of sexual behaviour reports in a whole population survey in rural Malawi

scientific article published on 27 July 2011

Association between haemoglobin variants S and C and Mycobacterium ulcerans disease (Buruli ulcer): a case-control study in Benin

scientific article published in April 2007

Association between socioeconomic position and tuberculosis in a large population-based study in rural Malawi

scientific article

Association of HIV infection and Mycobacterium ulcerans disease in Benin

scientific article published on 01 April 2008

Asymptomatic infection and unrecognised Ebola virus disease in Ebola-affected households in Sierra Leone: a cross-sectional study using a new non-invasive assay for antibodies to Ebola virus.

scientific article published on 27 February 2017

Attempting to explain heterogeneous HIV epidemics in sub-Saharan Africa: potential role of historical changes in risk behaviour and male circumcision

scientific article

Author Correction: Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis.

scientific article published on 19 April 2018

BCG vaccine effectiveness against Buruli ulcer: a case-control study in Benin.

scientific article

Bayesian reconstruction of Mycobacterium tuberculosis transmission networks in a high incidence area over two decades in Malawi reveals associated risk factors and genomic variants

scientific article published on 01 April 2020

Cash transfer scheme for reducing HIV and herpes simplex type 2

scientific article published in The Lancet

Cause of death and presence of respiratory disease at autopsy in an HIV-1 seroconversion cohort of southern African gold miners

article

Challenges in the estimation of the annual risk of Mycobacterium tuberculosis infection in children aged under 5 years

scientific article published on 19 May 2017

Changes in Mycobacterium tuberculosis genotype families over 20 years in a population-based study in Northern Malawi

scientific article published on 17 August 2010

Characterizing the emergence and persistence of drug resistant mutations in HIV-1 subtype C infections using 454 ultra deep pyrosequencing

scientific article published on 30 January 2013

Child mortality in rural Malawi: HIV closes the survival gap between the socio-economic strata

scientific article

Child sexual abuse and links to HIV and orphanhood in urban Zimbabwe

scientific article

Chilean miners: raising awareness of the plight of miners worldwide

scientific article published in The Lancet

Clinical predictors cannot replace biological predictors in HIV-2 infection in a community setting in West Africa ⬇️

scientific article published on March 2, 2012

Combining qualitative and quantitative evidence to determine factors leading to late presentation for antiretroviral therapy in Malawi

scientific article published on 16 November 2011

Community-Level Knowledge and Perceptions of Stroke in Rural Malawi

scientific article published on 05 June 2019

Comparison of different treatments for isoniazid-resistant tuberculosis: an individual patient data meta-analysis.

scientific article published in April 2018

Control of (multi)drug resistance and tuberculosis incidence over 23 years in the context of a well-supported tuberculosis programme in rural Malawi

scientific article published in 2013

Coreceptor usage, diversity, and divergence in drug-naive and drug-exposed individuals from Malawi, infected with HIV-1 subtype C for more than 20 years

scientific article published on 29 July 2014

Cotrimoxazole prophylaxis reduces mortality in human immunodeficiency virus-positive tuberculosis patients in Karonga District, Malawi

scientific article published on May 2004

Covid-19: excess all cause mortality in domiciliary care

scientific article published on 13 July 2020

DNA fingerprint changes in tuberculosis: reinfection, evolution, or laboratory error?

scientific article published on 3 August 2004

Deaths, late deaths, and role of infecting dose in Ebola virus disease in Sierra Leone: retrospective cohort study

scientific article

Declines in risk behaviour and sexually transmitted infection prevalence following a community-led HIV preventive intervention among female sex workers in Mysore, India

scientific article published on December 2008

Declining child mortality in northern Malawi despite high rates of infection with HIV.

scientific article

Detection, characterization, and enrollment of donors of Ebola convalescent plasma in Sierra Leone

scientific article

Determinants of cluster size in large, population-based molecular epidemiology study of tuberculosis, northern Malawi

scientific article published on July 2008

Does early linear growth failure influence later school performance? A cohort study in Karonga district, northern Malawi

scientific article published in PLoS ONE

Does increased general schooling protect against HIV infection? A study in four African cities

scientific article published on January 2004

Drivers of Tuberculosis Transmission

scientific article published in November 2017

Drug resistance mutations in drug-naive HIV type 1 subtype C-infected individuals from rural Malawi

scientific article published on 15 October 2010

Earlier menarche is associated with a higher prevalence of Herpes simplex type-2 (HSV-2) in young women in rural Malawi

scientific article (publication date: 28 January 2014)

Early evolution of the human immunodeficiency virus type 1 subtype C epidemic in rural Malawi

scientific article

Early school failure predicts teenage pregnancy and marriage: A large population-based cohort study in northern Malawi

scientific article published on 14 May 2018

Early transmission and case fatality of Ebola virus at the index site of the 2013-16 west African Ebola outbreak: a cross-sectional seroprevalence survey

article

Ebola exposure, illness experience, and Ebola antibody prevalence in international responders to the West African Ebola epidemic 2014-2016: A cross-sectional study.

scientific article published on 16 May 2017

Educational attainment and HIV-1 infection in developing countries: a systematic review

scientific article

Effect of Acute Illness on Contact Patterns, Malawi, 2017

scientific article published on 01 January 2020

Effect of HIV on work-related injury rates in South African gold miners

article

Effect of antiretroviral therapy on the diagnostic accuracy of symptom screening for intensified tuberculosis case finding in a South African HIV clinic

scientific article

Effects of Mother's Illness and Breastfeeding on Risk of Ebola Virus Disease in a Cohort of Very Young Children

scientific article

Effects of duration of HIV infection and secondary tuberculosis transmission on tuberculosis incidence in the South African gold mines

scientific article published on September 2008

Emergence of a three codon deletion in gag p17 in HIV type 1 subtype C long-term survivors, and general population spread

scientific article published in February 2006

Environmental and health-related risk factors for Mycobacterium ulcerans disease (Buruli ulcer) in Benin.

scientific article

Estimating 'net' HIV-related mortality and the importance of background mortality rates

scientific article

Estimating the need for antiretroviral treatment and an assessment of a simplified HIV/AIDS case definition in rural Malawi

scientific article published on November 2007

Evaluating the impact of the DREAMS partnership to reduce HIV incidence among adolescent girls and young women in four settings: a study protocol

article

Exposure-Specific and Age-Specific Attack Rates for Ebola Virus Disease in Ebola-Affected Households, Sierra Leone

scientific article published on 15 August 2016

Factors affecting HIV concordancy in married couples in four African cities.

scientific article published on August 2004

Failing to progress or progressing to fail? Age-for-grade heterogeneity and grade repetition in primary schools in Karonga district, northern Malawi

scientific article published in January 2017

Fertility intentions and use of contraception among monogamous couples in northern Malawi in the context of HIV testing: a cross-sectional analysis

scientific article published on 20 December 2012

From affected to infected? Orphanhood and HIV risk among female adolescents in urban Zimbabwe

scientific article

From kitchen to classroom: Assessing the impact of cleaner burning biomass-fuelled cookstoves on primary school attendance in Karonga district, northern Malawi.

scientific article published on 12 April 2018

Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis

scientific article

HIV and pulmonary tuberculosis: the impact goes beyond those infected with HIV.

scientific article

HIV and the risk of tuberculosis due to recent transmission over 12 years in Karonga District, Malawi

scientific article published on 11 April 2009

HIV prevalence and associated risk factors among individuals aged 13-34 years in Rural Western Kenya

scientific article

HIV risk in relation to marriage in areas with high prevalence of HIV infection

scientific article published on August 2003

HIV type 1 mutational patterns in HIV type 1 subtype C-infected long-term survivors in Karonga District Malawi: further analysis and correction

scientific article published on 30 August 2011

Herpes simplex virus 2 infection increases HIV acquisition in men and women: systematic review and meta-analysis of longitudinal studies.

scientific article

Herpes simplex virus type 2: a key role in HIV incidence

scientific article published in July 2009

High accuracy of home-based community rapid HIV testing in rural Malawi

scientific article published on December 2010

High rates of recurrence in HIV-infected and HIV-uninfected patients with tuberculosis

scientific article published on March 2010

Highly divergent HIV type 1 group M sequences evident in Karonga District, Malawi in early 1980s

scientific article published in May 2003

How soon after infection with HIV does the risk of tuberculosis start to increase? A retrospective cohort study in South African gold miners

scientific article published on 13 December 2004

Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data

scholarly article by Benjamin Sobkowiak et al published 14 August 2018 in BMC Genomics

Implication of new WHO growth standards on identification of risk factors and estimated prevalence of malnutrition in rural Malawian infants

scientific article

Improved retention of patients starting antiretroviral treatment in Karonga District, northern Malawi, 2005-2012.

scientific article

Individual, household and community factors associated with HIV test refusal in rural Malawi

scientific article published on 6 October 2008

Is education the link between orphanhood and HIV/HSV-2 risk among female adolescents in urban Zimbabwe?

scientific article

Isoniazid plus antiretroviral therapy to prevent tuberculosis: a randomised double-blind, placebo-controlled trial

scientific article

Long-term follow-up of HIV-positive and HIV-negative individuals in rural Malawi

scientific article published on July 2002

Lusting, learning and lasting in school: sexual debut, school performance and dropout among adolescents in primary schools in Karonga district, northern Malawi

scientific article published on 29 April 2019

Male circumcision for HIV prevention in sub-Saharan Africa: who, what and when?

scientific article

Maternal HIV status associated with under-five mortality in rural Northern Malawi: a prospective cohort study

scientific article published in January 2015

Measuring causes of adult mortality in rural northern Malawi over a decade of change

scientific article

Measuring concurrency: an empirical study of different methods in a large population-based survey and evaluation of the UNAIDS guidelines

scientific article published on May 2012

Missed opportunities in TB diagnosis: a TB process-based performance review tool to evaluate and improve clinical care

scientific article

Molecular detection of mixed infections of Mycobacterium tuberculosis strains in sputum samples from patients in Karonga District, Malawi

scientific article published on 20 October 2010

Monitoring the impact of decentralised chronic care services on patient travel time in rural Africa--methods and results in Northern Malawi

scientific article published on 15 November 2012

Mycobacterium tuberculosis Beijing genotype, northern Malawi

scientific article published on January 2005

Open access policy ⬇️

scientific article published on June 15, 2013

Patterns and risk factors for deaths from external causes in rural Malawi over 10 years: a prospective population-based study

scientific article

Performance of commercially available enzyme immunoassays for detection of antibodies against herpes simplex virus type 2 in African populations

scientific article published on July 2004

PhyTB: Phylogenetic tree visualisation and sample positioning for M. tuberculosis

scientific article published on 13 May 2015

PolyTB: a genomic variation map for Mycobacterium tuberculosis

scientific article

Population-level effect of HIV on adult mortality and early evidence of reversal after introduction of antiretroviral therapy in Malawi

scientific article published on May 2008

Population-level effect of potential HSV2 prophylactic vaccines on HIV incidence in sub-Saharan Africa

scientific article published on 09 December 2008

Population-level reduction in adult mortality after extension of free anti-retroviral therapy provision into rural areas in northern Malawi

scientific article published on 19 October 2010

Pre-treatment loss to follow-up in tuberculosis patients in low- and lower-middle-income countries and high-burden countries: a systematic review and meta-analysis

scientific article (publication date: February 2014)

Predictive value of interferon-γ release assays for incident active tuberculosis: a systematic review and meta-analysis

scientific article

Prevalence of obesity, hypertension, and diabetes, and cascade of care in sub-Saharan Africa: a cross-sectional, population-based study in rural and urban Malawi

scientific article published on 19 January 2018

Profile: the Karonga Health and Demographic Surveillance System

scientific article (publication date: June 2012)

Proportion of new HIV infections attributable to herpes simplex 2 increases over time: simulations of the changing role of sexually transmitted infections in sub-Saharan African HIV epidemics.

scientific article published on 03 April 2007

Protecting workers aged 60-69 years from COVID-19

scientific article published on 16 April 2020

Public health: Design for living

scientific article published on September 2017

Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences

scientific article published on 27 May 2015

Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages

scientific article

Recurrence due to relapse or reinfection with Mycobacterium tuberculosis: a whole-genome sequencing approach in a large, population-based cohort with a high HIV infection prevalence and active follow-up

scientific article

Recurrent TB: relapse or reinfection? The effect of HIV in a general population cohort in Malawi

scientific article

Reed Elsevier and the arms trade revisited

scientific article published on 01 March 2007

Reliability of reporting of HIV status and antiretroviral therapy usage during verbal autopsies: a large prospective study in rural Malawi

scientific article published on 09 June 2016

Reverse transcriptase drug resistance mutations in HIV-1 subtype C infected patients on ART in Karonga District, Malawi

scientific article published on 13 October 2011

Risk of Mycobacterium tuberculosis transmission in an antiretroviral therapy clinic

scientific article published on 01 October 2018

School staff perpetration of physical violence against students in Uganda: a multilevel analysis of risk factors

scientific article

Strengthening the Reporting of Molecular Epidemiology for Infectious Diseases (STROME-ID): an extension of the STROBE statement.

scientific article

Subsequent mortality in survivors of Ebola virus disease in Guinea: a nationwide retrospective cohort study

scientific article published on 04 September 2019

Survival from HIV-1 seroconversion in Southern Africa: a retrospective cohort study in nearly 2000 gold-miners over 10 years of follow-up

scientific article published on March 2007

Surviving Ebola: A historical cohort study of Ebola mortality and survival in Sierra Leone 2014-2015

scientific article published in PLoS ONE

Sustained 10-year gain in adult life expectancy following antiretroviral therapy roll-out in rural Malawi: July 2005 to June 2014.

scientific article published on 14 October 2016

Systematic analysis of infectious disease outcomes by age shows lowest severity in school-age children

scientific article published on 15 October 2020

Systematic review exploring time trends in the association between educational attainment and risk of HIV infection in sub-Saharan Africa

scientific article published on January 2008

The Acceptability of Online Consent in a Self-Test Serosurvey of Responders to the 2014-2016 West African Ebola Outbreak

The effect of HIV and antiretroviral therapy on characteristics of pulmonary tuberculosis in northern Malawi: a cross-sectional study

scientific article published on 25 February 2014

The effect of HIV infection on time off work in a large cohort of gold miners with known dates of seroconversion

scientific article

The evolving epidemiology of HIV infection and tuberculosis in northern Thailand

scientific article published on 01 September 2002

The impact of HIV and ART on recurrent tuberculosis in a sub-Saharan setting

scientific article published in November 2012

The impact of HIV, an antiretroviral programme and tuberculosis on mortality in South African platinum miners, 1992-2010

scientific article

The importance of recent infection with Mycobacterium tuberculosis in an area with high HIV prevalence: a long-term molecular epidemiological study in Northern Malawi

scientific article published on 23 June 2005

The long-term impact of HIV and orphanhood on the mortality and physical well-being of children in rural Malawi

scientific article

The long-term social and economic impact of HIV on the spouses of infected individuals in northern Malawi

scientific article published on 22 February 2008

The role of context: neighbourhood characteristics strongly influence HIV risk in young women in Ndola, Zambia

scientific article published on February 2008

Time from HIV seroconversion to death: a collaborative analysis of eight studies in six low and middle-income countries before highly active antiretroviral therapy

scientific article published on November 2007

Timing and reconstruction of the most recent common ancestor of the subtype C clade of human immunodeficiency virus type 1.

scientific article published on October 2004

Timing, rates, and causes of death in a large South African tuberculosis programme

scientific article

Treating curable sexually transmitted infections to prevent HIV in Africa: still an effective control strategy?

scientific article published on March 2008

Trends and measurement of HIV prevalence in northern Malawi

scientific article published in August 2003

Trends in tuberculosis and the influence of HIV infection in northern Malawi, 1988-2001.

scientific article published on July 2004

Tuberculosis and survival of HIV-infected individuals by time since seroconversion

scientific article published on April 2010

Tuberculosis transmission attributable to close contacts and HIV status, Malawi

scientific article

Underestimation of HIV prevalence in surveys when some people already know their status, and ways to reduce the bias

scientific article published on January 2013

Understanding the differences between contrasting HIV epidemics in east and west Africa: results from a simulation model of the Four Cities Study

scientific article

Understanding why people participate in HIV surveillance

scientific article published on May 2015

Unintended Childbearing and Child Growth in Northern Malawi

scientific article published on 04 August 2016

Unnatural deaths in South African platinum miners, 1992-2008

scientific article (publication date: 2011)

Unusual Ebola Virus Chain of Transmission, Conakry, Guinea, 2014-2015

scientific article

Uptake of prevention of mother-to-child-transmission using Option B+ in northern rural Malawi: a retrospective cohort study

scientific article

Use of antenatal clinic surveillance to assess the effect of sexual behavior on HIV prevalence in young women in Karonga district, Malawi

scientific article published on June 2008

Use of data from HIV counselling and testing services for HIV surveillance in Africa

scientific article published in February 2007

Using capture-recapture methods to study recent transmission of tuberculosis

scientific article published on 27 May 2004

Vaccine effectiveness estimates, 2004-2005 mumps outbreak, England.

scientific article

Variability in intra-household transmission of Ebola virus, and estimation of the household secondary attack rate.

scientific article published on 11 November 2017

Very early anthropometric changes after antiretroviral therapy predict subsequent survival, in karonga, Malawi

scientific article

What happens to ART-eligible patients who do not start ART? Dropout between screening and ART initiation: a cohort study in Karonga, Malawi

scientific article

Whole Genome Sequencing Shows a Low Proportion of Tuberculosis Disease Is Attributable to Known Close Contacts in Rural Malawi

scientific article published on 16 July 2015

Yield of HIV-associated tuberculosis during intensified case finding in resource-limited settings: a systematic review and meta-analysis

scientific article

Zika Virus Infection during Pregnancy and Effects on Early Childhood Development, French Polynesia, 2013-2016

scientific article published in October 2018

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