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List of works by Kai Blin

ARTS-DB: a database for antibiotic resistant targets

scientific article published on 01 January 2022

Artificial intelligence for natural product drug discovery ⬇️

scientific article from 2023

CRISPR-Cas9 Toolkit for Actinomycete Genome Editing

scientific article published in January 2018

CRISPy-web: An online resource to design sgRNAs for CRISPR applications.

scientific article

Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids

scientific article

Disclosing the Potential of the SARP-Type Regulator PapR2 for the Activation of Antibiotic Gene Clusters in Streptomycetes

scientific article published on 18 February 2020

Discovery and Characterization of Epemicins A and B, New 30-Membered Macrolides from Kutzneria sp. CA-103260

scientific article published on 19 July 2021

Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

scientific article

DoRiNA 2.0--upgrading the doRiNA database of RNA interactions in post-transcriptional regulation

scientific article

Engineering of actinomycetes using CRISPR/Cas9 technologies

scientific article

Highly efficient DSB-free base editing for streptomycetes with CRISPR-BEST

scientific article published on 23 September 2019

Improved lanthipeptide detection and prediction for antiSMASH

scientific article

MIBiG 2.0: a repository for biosynthetic gene clusters of known function

scientific article published on 01 January 2020

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

scientific article published on 18 November 2022

MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration

scientific article published on 9 December 2024

Minimum Information about a Biosynthetic Gene cluster.

scientific article published on August 2015

NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

scientific article

Open Advice ⬇️

book

Patscanui: an intuitive web interface for searching patterns in DNA and protein data.

scientific article published in July 2018

Programmable polyketide biosynthesis platform for production of aromatic compounds in yeast

scientific article published on 23 January 2020

Proteomic approach to reveal the regulatory function of aconitase AcnA in oxidative stress response in the antibiotic producer Streptomyces viridochromogenes Tü494 ⬇️

scientific article published on 3 February 2014

Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters.

scientific article

Recent development of computational resources for new antibiotics discovery.

scientific article published on 16 November 2017

Sequence-based classification of type II polyketide synthase biosynthetic gene clusters for antiSMASH

scientific article published on 04 January 2019

Ten Simple Rules for Taking Advantage of Git and GitHub

scientific article (publication date: July 2016)

The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery

scientific article published on 2 May 2017

The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters

article

The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymes

scientific article published on 05 November 2020

The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

scientific article published on 24 October 2016

The bifunctional role of aconitase in Streptomyces viridochromogenes Tü494.

scientific article published in November 2012

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

scientific article published on 3 June 2013

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

scientific article published on 6 May 2015

antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification

scientific article published on 28 April 2017

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

scientific article published on 01 July 2019

antiSMASH 6.0: improving cluster detection and comparison capabilities

scientific article published in 2021

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

scientific article published on 14 June 2011

plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters

scientific article

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