List of works by Kate R. Rosenbloom

28-way vertebrate alignment and conservation track in the UCSC Genome Browser

scientific article (publication date: December 2007)

A comparative encyclopedia of DNA elements in the mouse genome

scientific article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

scientific article

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

scientific article published in June 2007

Comparative Genomic Analysis Using the UCSC Genome Browser

Comparative genomic analysis using the UCSC genome browser

scientific article published in January 2007

Detection of nonneutral substitution rates on mammalian phylogenies

scientific article published on 26 October 2009

ENCODE data in the UCSC Genome Browser: year 5 update

scientific article

ENCODE whole-genome data in the UCSC Genome Browser

scientific article

ENCODE whole-genome data in the UCSC Genome Browser: update 2012.

scientific article

ENCODE whole-genome data in the UCSC genome browser (2011 update)

scientific article

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

scientific article

Forces Shaping the Fastest Evolving Regions in the Human Genome

Forces shaping the fastest evolving regions in the human genome

scientific article

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

scientific article

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

scientific article published in June 2007

Identification and classification of conserved RNA secondary structures in the human genome

scientific article

Phylogenomic resources at the UCSC Genome Browser

scientific article published in January 2008

Rodent evolution: back to the root

scientific article

The ENCODE Project at UC Santa Cruz

scientific article

The UCSC Ebola Genome Portal

scientific article published on 7 November 2014

The UCSC Genome Browser database: 2014 update

scientific article

The UCSC Genome Browser database: 2015 update

scientific article

The UCSC Genome Browser database: 2016 update

scientific article

The UCSC Genome Browser database: 2017 update

scientific article

The UCSC Genome Browser database: 2018 update

scientific article published on 2 November 2017

The UCSC Genome Browser database: 2019 update

scientific article published on 01 January 2019

The UCSC Genome Browser database: 2021 update

scientific article published on 22 November 2020

The UCSC Genome Browser database: extensions and updates 2011.

scientific article

The UCSC Genome Browser database: update 2010

scientific article (publication date: 2010)

The UCSC Genome Browser database: update 2011

scientific article

The UCSC SARS-CoV-2 Genome Browser

scientific article published on 05 May 2020

The UCSC SARS-CoV-2 Genome Browser

scientific article published on 09 September 2020

Toil enables reproducible, open source, big biomedical data analyses

scientific article

UCSC Data Integrator and Variant Annotation Integrator

scientific article published on 6 January 2016

UCSC Genome Browser enters 20th year

scientific article published on 01 January 2020

Use of ENCODE resources to characterize novel proteoforms and missing proteins in the human proteome.

scientific article

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