List of works - Mary K. Firestone

Measurement error and resolution in quantitative stable isotope probing: implications for experimental design

scientific article

Corrigendum to “Microbial extracellular polysaccharide production and aggregate stability controlled by Switchgrass (Panicum virgatum) root biomass and soil water potential” [Soil Biology and Biochemistry 143 (2020) 107741]

scientific article

Niche differentiation is spatially and temporally regulated in the rhizosphere

scientific article

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

scientific article

Microbial community assembly differs by mineral type in the rhizosphere

scientific article

Evaluation of accelerated H<sup>+</sup>applications in predicting soil chemical and microbial changes due to acid rain

scientific article published in 1982

Belowground allocation and dynamics of recently fixed plant carbon in a California annual grassland

scientific article

Divergent microbial traits influence the transformation of living versus dead root inputs to soil carbon

LIST OF CONTRIBUTORS

Stable-Isotope-Informed, Genome-Resolved Metagenomics Uncovers Potential Cross-Kingdom Interactions in Rhizosphere Soil

scientific article

A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil

Metatranscriptomes of California grassland soil microbial communities in response to rewetting

scientific article published in 2024

Microbial extracellular polysaccharide production and aggregate stability controlled by switchgrass (Panicum virgatum) root biomass and soil water potential

scientific article

Managing Plant Microbiomes for Sustainable Biofuel Production

Belowground allocation and dynamics of recently fixed plant carbon in a California annual grassland soil

Stable isotope informed genome-resolved metagenomics uncovers potential trophic interactions in rhizosphere soil

scientific article

Microbial extracellular polysaccharide production and aggregate stability controlled by Switchgrass (Panicum virgatum) root biomass and soil water potential

scientific article

Using stable isotopes to explore root-microbe-mineral interactions in soil

scientific article

Spectroscopic analysis reveals that soil phosphorus availability and plant allocation strategies impact feedstock quality of nutrient-limited switchgrass

scientific article published on 11 March 2022

Conversion of marginal land into switchgrass conditionally accrues soil carbon and reduces methane consumption

scientific article

Microbial functional diversity: From concepts to applications

scientific article published on 02 October 2019

Root Carbon Interaction with Soil Minerals Is Dynamic, Leaving a Legacy of Microbially Derived Residues

scientific article

Quantifying the effects of switchgrass (Panicum virgatum) on deep organic C stocks using natural abundance 14C in three marginal soils

scientific article

Large losses of ammonium-nitrogen from a rice ecosystem under elevated CO2

scientific article published on 16 October 2020

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

scientific article published on 12 March 2020

Transcription of macromolecular N degrading genes provides a window into organic nitrogen decomposition in soil

scientific article

Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest

scientific article published on 17 May 2005

Annual grassland resource pools and fluxes: sensitivity to precipitation and dry periods on two contrasting soils

scientific article published in 2012

Life and death in the soil microbiome: how ecological processes influence biogeochemistry

scientific article published on 28 February 2022

Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design

scientific article published on 21 July 2020

The Functional Significance of Bacterial Predators

scientific article

Quantifying the effects of switchgrass ( Panicum virgatum ) on deep organic C stocks using natural abundance 14 C in three marginal soils

scientific article

Functional succession of actively growing soil microorganisms during rewetting is shaped by precipitation history

Mesoscale Biotransformations of Uranium: Identifying Sites and Strategies where Reductive Immobilization is Practical

scholarly article published 1 June 2006

Fog Water and Ecosystem Function: Heterogeneity in a California Redwood Forest

scientific article published in 2009

A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

scientific article published on 18 September 2020

Distribution of Chromium Contamination and Microbial Activity in Soil Aggregates

Root carbon interaction with soil minerals is dynamic, leaving a legacy of microbially-derived residues

scientific article

Plant roots alter microbial functional genes supporting root litter decomposition

scientific article

Routes to Roots: Direct Evidence of Water Transport by Arbuscular Mycorrhizal Fungi to Host Plants

scientific article

Protist diversity and community complexity in the rhizosphere of switchgrass are dynamic as plants develop

scientific article

Unexpected diversity of CPR bacteria and nanoarchaea in the rare biosphere of rhizosphere-associated grassland soil

Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption

scientific article

HOW DISTURBANCE BY FOSSORIAL MAMMALS ALTERS N CYCLING IN A CALIFORNIA ANNUAL GRASSLAND

scientific article published in 2003

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

scientific article published in 2021

Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems

scientific article published on 20 December 2022

List of works by Mary K. Firestone

Measurement error and resolution in quantitative stable isotope probing: implications for experimental design

Corrigendum to “Microbial extracellular polysaccharide production and aggregate stability controlled by Switchgrass (Panicum virgatum) root biomass and soil water potential” [Soil Biology and Biochemistry 143 (2020) 107741]

Niche differentiation is spatially and temporally regulated in the rhizosphere

Metatranscriptomic reconstruction reveals RNA viruses with the potential to shape carbon cycling in soil

Microbial community assembly differs by mineral type in the rhizosphere

Evaluation of accelerated H<sup>+</sup>applications in predicting soil chemical and microbial changes due to acid rain

Belowground allocation and dynamics of recently fixed plant carbon in a California annual grassland

Divergent microbial traits influence the transformation of living versus dead root inputs to soil carbon

LIST OF CONTRIBUTORS

Stable-Isotope-Informed, Genome-Resolved Metagenomics Uncovers Potential Cross-Kingdom Interactions in Rhizosphere Soil

A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil

Metatranscriptomes of California grassland soil microbial communities in response to rewetting

Microbial extracellular polysaccharide production and aggregate stability controlled by switchgrass (Panicum virgatum) root biomass and soil water potential

Managing Plant Microbiomes for Sustainable Biofuel Production

Belowground allocation and dynamics of recently fixed plant carbon in a California annual grassland soil

Stable isotope informed genome-resolved metagenomics uncovers potential trophic interactions in rhizosphere soil

Microbial extracellular polysaccharide production and aggregate stability controlled by Switchgrass (Panicum virgatum) root biomass and soil water potential

Using stable isotopes to explore root-microbe-mineral interactions in soil

Spectroscopic analysis reveals that soil phosphorus availability and plant allocation strategies impact feedstock quality of nutrient-limited switchgrass

Conversion of marginal land into switchgrass conditionally accrues soil carbon and reduces methane consumption

Microbial functional diversity: From concepts to applications

Root Carbon Interaction with Soil Minerals Is Dynamic, Leaving a Legacy of Microbially Derived Residues

Quantifying the effects of switchgrass (Panicum virgatum) on deep organic C stocks using natural abundance 14C in three marginal soils

Large losses of ammonium-nitrogen from a rice ecosystem under elevated CO2

Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil

Transcription of macromolecular N degrading genes provides a window into organic nitrogen decomposition in soil

Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest

Annual grassland resource pools and fluxes: sensitivity to precipitation and dry periods on two contrasting soils

Life and death in the soil microbiome: how ecological processes influence biogeochemistry

Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design

The Functional Significance of Bacterial Predators

Quantifying the effects of switchgrass ( Panicum virgatum ) on deep organic C stocks using natural abundance 14 C in three marginal soils

Functional succession of actively growing soil microorganisms during rewetting is shaped by precipitation history

Mesoscale Biotransformations of Uranium: Identifying Sites and Strategies where Reductive Immobilization is Practical

Fog Water and Ecosystem Function: Heterogeneity in a California Redwood Forest

A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

Distribution of Chromium Contamination and Microbial Activity in Soil Aggregates

Root carbon interaction with soil minerals is dynamic, leaving a legacy of microbially-derived residues

Plant roots alter microbial functional genes supporting root litter decomposition

Routes to Roots: Direct Evidence of Water Transport by Arbuscular Mycorrhizal Fungi to Host Plants

Protist diversity and community complexity in the rhizosphere of switchgrass are dynamic as plants develop

Unexpected diversity of CPR bacteria and nanoarchaea in the rare biosphere of rhizosphere-associated grassland soil

Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption

HOW DISTURBANCE BY FOSSORIAL MAMMALS ALTERS N CYCLING IN A CALIFORNIA ANNUAL GRASSLAND

Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches

Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems