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List of works by Emma Johnston

A Case of Unusual Ileal Discolouration

scientific article published on 5 October 2017

A Decision Framework for Coastal Infrastructure to Optimize Biotic Resistance and Resilience in a Changing Climate

scientific article published in 2019

A biomarker of contaminant exposure is effective in large scale assessment of ten estuaries

scientific article published on 25 January 2014

A biomonitor as a measure of an ecologically-significant fraction of metals in an industrialized harbour.

scientific article published on 13 January 2012

A global analysis of complexity–biodiversity relationships on marine artificial structures

scientific article published in 2020

A global horizon scan of issues impacting marine and coastal biodiversity conservation

scientific article published in 2022

A new predatory flatworm (Platyhelminthes, Polycladida) from Botany Bay, New South Wales, Australia

scholarly article by Emma Johnston published in 2006

A novel framework for the use of remote sensing for monitoring catchments at continental scales.

scientific article published on 18 April 2018

A practical guide to thiopurine prescribing and monitoring in IBD

scientific article published on 29 August 2016

A widespread contaminant enhances invasion success of a marine invader

article

Algal canopy as a proxy for the disturbance history of understorey communities in East Antarctica

Altered fish community and feeding behaviour in close proximity to boat moorings in an urban estuary.

scientific article published on 10 February 2018

An ecological halo surrounding a large offshore artificial reef: Sediments, infauna, and fish foraging

scientific article published on 27 July 2018

An empirical examination of consumer effects across twenty degrees of latitude

scientific article published on 10 June 2017

An evaluation of semi-automated methods for collecting ecosystem-level data in temperate marine systems.

scientific article

An unusual complication of a duodenal ulcer

scientific article published on 09 December 2014

Antarctic patterns of shallow subtidal habitat and inhabitants in Wilke’s Land

article

Antifouling strategies: history and regulation, ecological impacts and mitigation.

scientific article

Artificial structures alter kelp functioning across an urbanised estuary

scientific article published on 05 May 2018

Assessing contaminated sediments in the context of multiple stressors

scientific article published on 07 October 2010

Assessment tools for microplastics and natural fibres ingested by fish in an urbanised estuary

scientific article

Bacterial communities are sensitive indicators of contaminant stress.

scientific article published on 3 March 2012

Bearing the burden of boat harbours: heavy contaminant and fouling loads in a native habitat-forming alga.

scientific article

Beyond the bed: Effects of metal contamination on recruitment to bedded sediments and overlying substrata ⬇️

scientific article published on November 29, 2012

Biodiversity conservation in Sydney Harbour

Biomonitors and the assessment of ecological impacts: distribution of herbivorous epifauna in contaminated macroalgal beds.

scientific article published on 20 February 2008

Body size affects lethal and sublethal responses to organic enrichment: Evidence of associational susceptibility for an infaunal bivalve

scientific article published in July 2021

Building 'blue': An eco-engineering framework for foreshore developments.

scientific article

Caught between a rock and a hard place: Fish predation interacts with crevice width and orientation to explain sessile assemblage structure

scientific article published on 10 March 2018

Coastal urban lighting has ecological consequences for multiple trophic levels under the sea.

scientific article published on 22 October 2016

Coastal urbanisation affects microbial communities on a dominant marine holobiont.

scientific article

Colonisation of the non-indigenous Pacific oyster crassostrea gigas determined by predation, size and initial settlement densities

scientific article

Comparing differential tolerance of native and non-indigenous marine species to metal pollution using novel assay techniques

scientific article published on 15 May 2009

Comparing the Invasibility of Experimental “Reefs” with Field Observations of Natural Reefs and Artificial Structures ⬇️

scientific article published on May 30, 2012

Conceptualising sustainability through environmental stewardship and virtuous cycles—a new empirically-grounded model

scientific article published on 9 June 2021

Contaminant cocktails: Interactive effects of fertiliser and copper paint on marine invertebrate recruitment and mortality.

scientific article published on 26 November 2015

Contaminant pulse following wildfire is associated with shifts in estuarine benthic communities

scientific article published in 2023

Contaminants reduce the richness and evenness of marine communities: a review and meta-analysis

scientific article

Contaminated suspended sediments toxic to an Antarctic filter feeder: aqueous- and particulate-phase effects

scientific article published in February 2009

Contamination of marine biogenic habitats and effects upon associated epifauna.

scientific article published on 10 April 2008

Continental patterns in marine debris revealed by a decade of citizen science

scientific article published in 2022

Continental-scale governance and the hastening of loss of Australia's biodiversity.

scientific article published in December 2013

Contrasting distributions of bacteriophages and eukaryotic viruses from contaminated coastal sediments

scholarly article by Tim Lachnit et al published 2 July 2018 in Environmental Microbiology

Contrasting distributions of bacteriophages and eukaryotic viruses from contaminated coastal sediments

scholarly article by Tim Lachnit et al published 19 October 2018 in Environmental Microbiology

Core sediment bacteria drive community response to anthropogenic contamination over multiple environmental gradients.

scientific article

Corrigendum to: Size, depth and position affect the diversity and structure of rock pool communities in an urban estuary

scholarly article

Differences in Intertidal Microbial Assemblages on Urban Structures and Natural Rocky Reef

scientific article

Differential effects of tributyltin and copper antifoulants on recruitment of non-indigenous species.

scientific article

Differential tolerance to copper, but no evidence of population-level genetic differences in a widely-dispersing native barnacle.

scientific article published on 19 March 2013

Differential tolerance to metals among populations of the introduced bryozoan Bugula neritina

scientific article published in 2005

Dinoflagellate cyst abundance is positively correlated to sediment organic carbon in Sydney Harbour and Botany Bay, NSW, Australia.

scientific article published on 12 December 2017

Disentangling settlement responses to nutrient-rich contaminants: Elevated nutrients impact marine invertebrate recruitment via water-borne and substrate-bound cues

scientific article published on 20 July 2018

Diversity and cover of a sessile animal assemblage does not predict its associated mobile fauna

article

Ecological consequences of copper contamination in macroalgae: effects on epifauna and associated herbivores

scientific article published in September 2006

Effect of Desalination Discharge on the Abundance and Diversity of Reef Fishes

scientific article published on 18 December 2019

Effects of sea-ice cover on marine benthic communities: a natural experiment in Commonwealth Bay, East Antarctica

Elevated nutrients change bacterial community composition and connectivity: high throughput sequencing of young marine biofilms

scientific article published in January 2016

Environmental and ecological changes associated with a marina.

scientific article

Exploring the social dimension of sandy beaches through predictive modelling

scientific article published on 13 March 2018

Faster, Higher and Stronger? The Pros and Cons of Molecular Faunal Data for Assessing Ecosystem Condition

scientific article published in 2014

Fatty acid composition of the estuarine amphipod, Melita plumulosa (Zeidler): link between diet and fecundity.

scientific article

Field and laboratory simulations of storm water pulses: behavioural avoidance by marine epifauna

scientific article published on 22 June 2007

Fine-Scale Effects of Boat Moorings on Soft Sediment Communities Masked in Large-Scale Comparisons

scholarly article

First large-scale ecological impact study of desalination outfall reveals trade-offs in effects of hypersalinity and hydrodynamics

scientific article published on 01 September 2018

Genetic variability in tolerance to copper contamination in a herbivorous marine invertebrate.

scientific article published in April 2010

Habitat complexity effects on diversity and abundance differ with latitude: an experimental study over 20 degrees

scientific article published on 07 August 2018

Heritable pollution tolerance in a marine invader

scientific article

High levels of sediment contamination have little influence on estuarine beach fish communities

scientific article

Identifying the consequences of ocean sprawl for sedimentary habitats

scientific article published in 2017

Impacts of California’s climate-relevant land use policy scenarios on terrestrial carbon emissions (CO<sub>2</sub> and CH<sub>4</sub>) and wildfire risk

scientific article published in 2021

Impacts of desalination plant discharges on the marine environment: A critical review of published studies

scientific article published on 04 May 2010

Impacts of necrotising disease on the Endangered cauliflower soft coral (Dendronephthya australis)

scientific article published on 5 February 2024

Indicators of environmental stress: cellular biomarkers and reproductive responses in the Sydney rock oyster (Saccostrea glomerata)

scientific article published on 08 April 2012

Interactive effects of multiple stressors revealed by sequencing total (DNA) and active (RNA) components of experimental sediment microbial communities

scientific article published on 15 May 2018

Intrinsic time dependence in the diversity-invasibility relationship

scientific article

Invasion Expansion: Time since introduction best predicts global ranges of marine invaders ⬇️

scientific article

Its What’s on the Inside That Counts: An Effective, Efficient, and Streamlined Method for Quantification of Octocoral Symbiodiniaceae and Chlorophyll

scientific article published on 9 September 2021

Key drivers of effectiveness in small marine protected areas

Know Thy Anemone: A Review of Threats to Octocorals and Anemones and Opportunities for Their Restoration

scientific article published on 22 July 2020

LESI: A quantitative indicator to measure local environmental stewardship

scientific article published on 12 November 2020

Latitudinal variation in the competition-colonisation trade-off reveals rate-mediated mechanisms of coexistence

scientific article published on 21 June 2017

Latitudinal variation in the diversity–disturbance relationship demonstrates the context dependence of disturbance impacts

scientific article published in 2021

Legacy Metal Contaminants and Excess Nutrients in Low Flow Estuarine Embayments Alter Composition and Function of Benthic Bacterial Communities

scientific article published in 2021

Light-driven tipping points in polar ecosystems

scientific article

Links between contaminant hotspots in low flow estuarine systems and altered sediment biogeochemical processes

scientific article published in 2017

Links between estuarine condition and spatial distributions of marine invaders

scientific article published in 2009

Low levels of copper reduce the reproductive success of a mobile invertebrate predator

scientific article published on 24 February 2007

MBACI sampling of an episodic disturbance: stormwater effects on algal epifauna

scientific article

Manipulating the intrinsic parameters of propagule pressure: implications for bio-invasion

article by Luke H. Hedge et al published June 2012 in Ecosphere

Marine spatial planning and ocean accounting: Synergistic tools enhancing integration in ocean governance

scientific article published in 2022

Marine urbanization: an ecological framework for designing multifunctional artificial structures

article published in 2015

Meso-predators: A confounding variable in consumer exclusion studies

scientific article published in 2014

Microbial Community Responses to Contaminants and the Use of Molecular Techniques

article

Mine Waste and Acute Warming Induce Energetic Stress in the Deep-Sea Sponge Geodia atlantica and Coral Primnoa resedeaformis; Results From a Mesocosm Study

article

Modeling recreational fishing intensity in a complex urbanised estuary

scientific article published on 24 November 2020

Multiple stressors in sediments impact adjacent hard substrate habitats and across biological domains.

scientific article

Nearshore marine communities at three New Zealand sub-Antarctic islands

scientific article published on 10 October 2019

Next generation sequence analysis of the transcriptome of Sydney rock oysters (Saccostrea glomerata) exposed to a range of environmental stressors.

scientific article

Novel in situ predator exclusion method reveals the relative effects of macro and mesopredators on sessile invertebrates in the field

scientific article published in 2019

Novel techniques for field assessment of copper toxicity on fouling assemblages

scientific article published on 01 January 2000

Physico-chemical changes in metal-spiked sediments deployed in the field: implications for the interpretation of in situ studies

scientific article published on 28 January 2011

Piers are hotspots for benthic marine debris in an urbanised estuary

scientific article published in 2022

Plastic Debris As a Vector for Bacterial Disease: An Interdisciplinary Systematic Review

scientific article published on 7 February 2022

Pollution reduces native diversity and increases invader dominance in marine hard-substrate communities

article by Richard F. Piola & Emma Johnston published 18 October 2007 in Diversity and Distributions

Pollution: effects of chemical contaminants and debris

scholarly article

Polychaete richness and abundance enhanced in anthropogenically modified estuaries despite high concentrations of toxic contaminants

scientific article (publication date: 2013)

Pore-size and polymer affect the ability of filters for washing-machines to reduce domestic emissions of fibres to sewage

scientific article published on 19 June 2020

Predicting the impact of sea-level rise on intertidal rocky shores with remote sensing

scientific article published on 02 March 2020

Promoter orientation of the immunomodulatory Bacteroides fragilis capsular polysaccharide A (PSA) is off in individuals with inflammatory bowel disease (IBD)

scientific article published on 07 February 2019

Propagule pressure and disturbance interact to overcome biotic resistance of marine invertebrate communities

scientific article published in 2009

Propagule pressure determines recruitment from a commercial shipping pier

scientific article published in January 2012

Pulse disturbances to the colonization of hard-substrates and in situ determination of copper using diffusive gradients in thin-films (DGT): quantifying dose and response in the field

scientific article published on 01 October 2003

Putting marine sanctuaries into context: a comparison of estuary fish assemblages over multiple levels of protection and modification

Quantifying abundance and distribution of native and invasive oysters in an urbanised estuary

scientific article published in 2016

REVIEW: Chemical contaminant effects on marine ecosystem functioning

article

Recipient Environment More Important than Community Composition in Determining the Success of an Experimental Sponge Transplant

scientific article published on 19 August 2010

Reduction of pollution impacts through the control of toxicant release rate must be site- and season-specific

scientific article

Relationships between body burdens of trace metals (As, Cu, Fe, Hg, Mn, Se, and Zn) and the relative body size of small tooth flounder (Pseudorhombus jenynsii).

scientific article published on 3 March 2012

Reproductive strategy and gamete development of an invasive fanworm, Sabella spallanzanii (Polychaeta: Sabellidae), a field study in Gulf St Vincent, South Australia ⬇️

scientific article published in PLoS ONE

Resuspended contaminated sediments cause sublethal stress to oysters: A biomarker differentiates total suspended solids and contaminant effects

scientific article published on 30 April 2015

Scaling-up marine restoration efforts in Australia

article

Seasonal variation in the effects of ocean warming and acidification on a native bryozoan, Celleporaria nodulosa

article

Sediment Contaminants and Infauna Associated with Recreational Boating Structures in a Multi-Use Marine Park

scientific article

Sediment bacterial communities associated with environmental factors in Intermittently Closed and Open Lakes and Lagoons (ICOLLs)

scientific article published on 19 July 2019

Shallow moving structures promote marine invader dominance.

scientific article published on January 2009

Small-scale habitat complexity of artificial turf influences the development of associated invertebrate assemblages

article

Spatial variation in microbial communities associated with sea-ice algae in Commonwealth Bay, East Antarctica

scientific article published on 13 April 2022

Strong links between metal contamination, habitat modification and estuarine larval fish distributions.

scientific article

Structural and functional effects of global invasion pressure on benthic marine communities—patterns, challenges and priorities

scientific article published on 9 May 2024

Sub-lethal effects of water-based drilling muds on the deep-water sponge Geodia barretti

scientific article published on 10 March 2016

Sublethal effects of contaminants on marine habitat-forming species: a review and meta-analysis

scientific article published on 02 July 2020

Tax4Fun2: a R-based tool for the rapid prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene marker gene sequences

article

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences

scientific article published in 2020

Temporal change in the diversity-invasibility relationship in the presence of a disturbance regime

scientific article

The National Marine Science Plan: informing Australia’s future ocean policy*

article

The Roles of Sea-Ice, Light and Sedimentation in Structuring Shallow Antarctic Benthic Communities.

scientific article

The application of bioturbators for aquatic bioremediation: Review and meta-analysis

scientific article published on 13 April 2019

The authors' reply

scientific article published in 2015

The challenge of choosing environmental indicators of anthropogenic impacts in estuaries

scientific article

The effects of substratum material and surface orientation on the developing epibenthic community on a designed artificial reef.

scientific article

The influence of antifouling practices on marine invasions

scientific article

The interacting effects of diversity and propagule pressure on early colonization and population size

scientific article

The potential for translocation of marine species via small-scale disruptions to antifouling surfaces

scientific article

The response of encrusting coralline algae to canopy loss: an independent test of predictions on an Antarctic coast

article

The role of habitat complexity in community development is mediated by resource availability.

scientific article

The speeding up of marine ecosystems

scientific article published in 2022

Tuberculous perforation of the oesophagus: a case report and review of the literature

scientific article published on 07 March 2019

Uncovering hidden heterogeneity: Geo-statistical models illuminate the fine scale effects of boating infrastructure on sediment characteristics and contaminants.

scientific article

Using clones and copper to resolve the genetic architecture of metal tolerance in a marine invader. ⬇️

scientific article

Using meta-omics of contaminated sediments to monitor changes in pathways relevant to climate regulation

scientific article published in 2018

Utilisation of anti-TNF levels in a UK tertiary IBD centre.

scientific article published on 29 November 2016

Variations in benthic fluxes of sediments near pier pilings and natural rocky reefs

scientific article published in 2022

Vasotropic light-chain amyloidosis and ischaemic cholangiopathy.

scientific article published on 25 June 2015

Vulnerability of Antarctic shallow invertebrate-dominated ecosystems

article by Graeme F. Clark et al published 7 April 2015 in Austral Ecology

What does impacted look like? High diversity and abundance of epibiota in modified estuaries.

scientific article

Wildfires cause rapid changes to estuarine benthic habitat

scientific article published in 2022

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