Search filters

List of works by Anete Pereira Souza

"Integrative genomic analysis of the bioprospection of regulators and accessory enzymes associated with cellulose degradation in a filamentous fungus (Trichoderma harzianum)"

scientific article published on 02 November 2020

"Targeted Sequencing by Gene Synteny," a New Strategy for Polyploid Species: Sequencing and Physical Structure of a Complex Sugarcane Region.

scientific article published on 28 March 2018

A genome-wide association study identified loci for yield component traits in sugarcane (Saccharum spp.).

scientific article published on 18 July 2019

A molecular linkage map for Drosophila mediopunctata confirms synteny with Drosophila melanogaster and suggests a region that controls the variation in the number of abdominal spots

scientific article published on 4 December 2011

A new member of the aldo-keto reductase family from the plant pathogen Xylella fastidiosa

scientific article

A new set of microsatellite loci for Cattleya walkeriana Gardner, an endangered tropical orchid species and its transferability to Cattleya loddigesii Lindl. and Cattleya nobilior Reichenbach

A population genomics appraisal suggests independent dispersals for bitter and sweet manioc in Brazilian Amazonia

scientific article published on 19 October 2019

A trans-Splicing Model for the Expression of the Tripartite nad5 Gene in Wheat and Maize Mitochondria

article

Adaptation of fluorescent technique for genotyping with new microsatellite markers in common bean

An engineered GH1 β-glucosidase displays enhanced glucose tolerance and increased sugar release from lignocellulosic materials

scientific article published on 20 March 2019

Analysis of Three Sugarcane Homo/Homeologous Regions Suggests Independent Polyploidization Events of Saccharum officinarum and Saccharum spontaneum

scientific article published on 12 January 2017

Analysis of genomic regions of Trichoderma harzianum IOC-3844 related to biomass degradation

scientific article

Author Correction: Network of proteins, enzymes and genes linked to biomass degradation shared by Trichoderma species

scientific article published in Scientific Reports

Building the sugarcane genome for biotechnology and identifying evolutionary trends.

scientific article

Capacidade combinatória, divergência genética entre linhagens de milho e correlação com heterose

Carbohydrate-active enzymes in Trichoderma harzianum: a bioinformatic analysis bioprospecting for key enzymes for the biofuels industry.

scientific article published on 12 October 2017

Characterization of microsatellite loci in Himatanthus drasticus (Apocynaceae), a medicinal plant from the Brazilian savanna ⬇️

scientific article published on August 22, 2011

Characterization of microsatellite markers developed from Prosopis rubriflora and Prosopis ruscifolia (Leguminosae - Mimosoideae), legume species that are used as models for genetic diversity studies in Chaquenian areas under anthropization in South

scientific article

Cloning, expression, and purification of the virulence-associated protein D from Xylella fastidiosa.

scientific article

Coexpression and Transcriptome analyses identify active Apomixis-related genes in Paspalum notatum leaves

scientific article published on 28 January 2020

Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.

scientific article

Comparison of similarity coefficients used for cluster analysis with dominant markers in maize (Zea mays L)

Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.

scientific article published on 5 July 2017

Construction and analysis of a leaf cDNA library from cold stressed rubber tree clones.

scientific article

Correlação da heterose de híbridos de milho com divergência genética entre linhagens

Corrigendum: Genetic Mapping With Allele Dosage Information in Tetraploid Urochloa decumbens (Stapf) R. D. Webster Reveals Insights Into Spittlebug (Notozulia entreriana Berg) Resistance

scientific article published on 26 June 2019

Crystal structure and biochemical characterization of the recombinant ThBgl, a GH1 β-glucosidase overexpressed in Trichoderma harzianum under biomass degradation conditions.

scientific article

Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high-order structure

scientific article published on 22 March 2017

Crystallization and preliminary X-ray analysis of stationary phase survival protein E (SurE) from Xylella fastidiosa in two crystal forms.

scientific article

De novo assembly and transcriptome analysis of contrasting sugarcane varieties

scientific article

De novo assembly and transcriptome analysis of the rubber tree (Hevea brasiliensis) and SNP markers development for rubber biosynthesis pathways

scientific article

Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis).

scientific article

Development and characterization of 14 microsatellite loci from an enriched genomic library of Eucalyptus camaldulensis Dehnh

article

Development and characterization of microsatellite markers for Piptadenia gonoacantha (Fabaceae).

scientific article published on 9 February 2015

Development and cross-validation of microsatellite markers for Rauvolfia weddeliana Müll.Arg. (Apocynaceae) species complex

article

Development of a recombinant fusion protein based on the dynein light chain LC8 for non-viral gene delivery

scientific article published on 20 January 2012

Development of microsatellite loci for the fish Poecilia vivipara (Cyprinodontiformes: Poeciliidae)

article

Development of microsatellite markers for the predatory mite Phytoseiulus macropilis and cross-amplification in three other species of phytoseiid mites

scientific article published on 16 November 2020

Development of microsatellite molecular markers and genetic diversity in Hevea Braziliensis

scientific article

Development of single nucleotide polymorphism markers in the large and complex rubber tree genome using next-generation sequence data

article

Development, characterization, and comparative analysis of polymorphism at common bean SSR loci isolated from genic and genomic sources

scientific article

Dinucleotide repeat polymorphism at D15S221

scientific article published on 01 February 1994

Drosophila mediopunctata microsatellites II: cross-species amplification in the tripunctata group and other Drosophila species

article

Elevation as a barrier: genetic structure for an Atlantic rain forest tree (Bathysa australis) in the Serra do Mar mountain range, SE Brazil

scientific article published on 14 April 2015

Evaluating genetic relationships between tropical maize inbred lines by means of AFLP profiling.

scientific article

Evidence of Allopolyploidy in Urochloa humidicola Based on Cytological Analysis and Genetic Linkage Mapping

scientific article

Expression and purification of a putative H-NS nucleoid-associated protein from the phytopathogen Xylella fastidiosa

scientific article published in November 2003

Extremophiles as a Model of a Natural Ecosystem: Transcriptional Coordination of Genes Reveals Distinct Selective Responses of Plants Under Climate Change Scenarios

article

Functional and small-angle X-ray scattering studies of a new stationary phase survival protein E (SurE) from Xylella fastidiosa--evidence of allosteric behaviour

scientific article published on 16 October 2009

Functional metagenomics of oil-impacted mangrove sediments reveals high abundance of hydrolases of biotechnological interest

scientific article

GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane

scientific article

Gene Duplication in the Sugarcane Genome: A Case Study of Allele Interactions and Evolutionary Patterns in Two Genic Regions

article

Genetic Diversity Strategy for the Management and Use of Rubber Genetic Resources: More than 1,000 Wild and Cultivated Accessions in a 100-Genotype Core Collection

scientific article published on 30 July 2015

Genetic Diversity and Population Structure of the Brachiaria brizantha Germplasm

Genetic Mapping With Allele Dosage Information in Tetraploid (Stapf) R. D. Webster Reveals Insights Into Spittlebug ( Berg) Resistance

scientific article published on 21 February 2019

Genetic Structure and Molecular Diversity of Cacao Plants Established as Local Varieties for More than Two Centuries: The Genetic History of Cacao Plantations in Bahia, Brazil

scientific article

Genetic diversity analysis among pigeonpea genotypes adapted to South American regions based on microsatellite markers

Genetic diversity in cultivated carioca common beans based on molecular marker analysis.

scientific article published on January 2011

Genetic diversity of Giardia duodenalis: multilocus genotyping reveals zoonotic potential between clinical and environmental sources in a metropolitan region of Brazil

scientific article published on 23 December 2014

Genetic diversity, spatial genetic structure and realised seed and pollen dispersal of Himatanthus drasticus (Apocynaceae) in the Brazilian savanna

article

Genetic structure and molecular diversity of Brazilian grapevine germplasm: Management and use in breeding programs

scientific article published on 15 October 2020

Genetic structure of two species in Chaco areas: A lack of allelic diversity diagnosis and insights into the allelic conservation of the affected species

scientific article published on 07 June 2018

Genetic variation in polyploid forage grass: assessing the molecular genetic variability in the Paspalum genus

scientific article

Genetic-diversity assessed by microsatellites in tropical maize populations submitted to a high-intensity reciprocal recurrent selection

Genomic diversity is similar between Atlantic Forest restorations and natural remnants for the native tree Casearia sylvestris Sw.

scientific article

Identification and characterization of the trnS/pseudo-tRNA/nad3/rps12 gene cluster from Coix lacryma-jobi L: organization, transcription and RNA editing

article

Identification of microsatellite loci in Pinus tecunumanii.

scientific article

Inheritance of growth habit detected by genetic linkage analysis using microsatellites in the common bean (Phaseolus vulgaris L.)

Initial crystallographic studies of a small heat-shock protein from Xylella fastidiosa.

scientific article published on 20 April 2012

Isolation and characterization of microsatellite loci in Sisyrinchium (Iridaceae) and cross amplification in other genera

scientific article

Isolation and characterization of microsatellite loci in tropical forage Stylosanthes capitata Vogel.

scientific article

Isolation and characterization of microsatellite markers from the stingless bee Nannotrigona testaceicornis

Leaf transcriptome of two highly divergent genotypes of Urochloa humidicola (Poaceae), a tropical polyploid forage grass adapted to acidic soils and temporary flooding areas.

scientific article

Local adaptation of a dominant coastal tree to freshwater availability and solar radiation suggested by genomic and ecophysiological approaches

scientific article published on 27 December 2019

Machine learning approaches reveal genomic regions associated with sugarcane brown rust resistance

scientific article published on 18 November 2020

Mapping QTL for Grain Yield and Plant Traits in a Tropical Maize Population

article

Mapping analysis of the Xylella fastidiosa genome.

scientific article

Mapping of a chromosome 15 region involved in limb girdle muscular dystrophy.

scientific article published on February 1994

Marchantia polymorpha mitochondrial orf identifies transcribed sequence in angiosperm mitochondrial genome

scientific article published on September 2001

Mating systems in tropical forages: Stylosanthes capitata Vog. and Stylosanthes guianensis (Aubl.) Sw

Microsatellite loci for Paspalum atratum (Poaceae) and cross-amplification in other species.

scientific article

Microsatellite loci for Urochloa decumbens (Stapf) R.D. Webster and cross-amplification in other Urochloa species

scientific article

Microsatellite markers for the endangered orchids Cattleya labiata Lindl. and C. warneri T. Moore (Orchidaceae)

Microsatellite-assisted backcross selection in maize

Microsatellites for genetic studies and breeding programs in common bean

Molecular Diversity and Genetic Structure of Guineagrass (Panicum maximum Jacq.), a Tropical Pasture Grass

Molecular and cytogenetic characterization of an AT-rich satellite DNA family in Urvillea chacoensis Hunz. (Paullinieae, Sapindaceae)

scientific article published on 25 November 2008

Molecular genotyping, diversity studies and high-resolution molecular markers unveiled by microsatellites in Giardia duodenalis

scientific article published on 30 November 2018

Molecular mapping in tropical maize (Zea mays L.) using microsatellite markers. 1. Map construction and localization of loci showing distorted segregation

scientific article published on January 2003

Molecular mapping in tropical maize (Zea mays L.) using microsatellite markers. 2. Quantitative trait loci (QTL) for grain yield, plant height, ear height and grain moisture

scientific article published on January 2003

Molecular phylogeny of the neotropical genus Christensonella (Orchidaceae, Maxillariinae): species delimitation and insights into chromosome evolution

scientific article published on 07 August 2008

Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)

scientific article published on 30 December 2019

Multiple-geographic-scale genetic structure of two mangrove tree species: the roles of mating system, hybridization, limited dispersal and extrinsic factors

scientific article published on 27 February 2015

Network of proteins, enzymes and genes linked to biomass degradation shared by Trichoderma species.

scientific article published on 22 January 2018

New hydrocarbon degradation pathways in the microbial metagenome from Brazilian petroleum reservoirs

scientific article

New microsatellite markers developed from an enriched microsatellite common bean library

Nitrogen pulses increase fungal pathogens in Amazonian lowland tropical rain forests

scientific article published in 2022

PCR-RFLP analysis of non-coding regions of cpDNA in Araucaria angustifolia (Bert.) O. Kuntze

Permanent genetic resources added to Molecular Ecology Resources Database 1 February 2011-31 March 2011.

scientific article published on 31 May 2011

Phylogeographic studies of Brazilian “campo-rupestre” species: Wunderlichia mirabilis Riedel ex Baker (Asteraceae)

article

Population Genetics of Polyploid Complex Psidium cattleyanum Sabine (Myrtaceae): Preliminary Analyses Based on New Species-Specific Microsatellite Loci and Extension to Other Species of the Genus

scientific article published on 27 September 2020

Population genetic analysis of Giardia duodenalis: genetic diversity and haplotype sharing between clinical and environmental sources

scientific article published on 11 January 2017

Population genetic structure, introgression, and hybridization in the genus Rhizophora along the Brazilian coast.

scientific article

Population structure and intraspecific ecological niche differentiation point to lineage divergence promoted by polyploidization in Psidium cattleyanum (Myrtaceae)

scientific article published in 2022

Potato cultivar identification using molecular markers

article by Patricia Marchezi Rosa et al published January 2010 in Pesquisa Agropecuaria Brasileira

Production of a recombinant swollenin from Trichoderma harzianum in Escherichia coli and its potential synergistic role in biomass degradation.

scientific article

QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions

article

QTL mapping for reaction to Phaeosphaeria leaf spot in a tropical maize population

scientific article

QTL mapping for yield components in a tropical maize population using microsatellite markers

Recent introduction and recombination in Colletotrichum acutatum populations associated with citrus postbloom fruit drop epidemics in São Paulo, Brazil

scientific article published on July 2014

Reciprocal recurrent selection effects on the genetic structure of tropical maize populations assessed at microsatellite loci

SUGARCANE: BREEDING METHODS AND GENETIC MAPPING

Secondary origin, hybridization and sexual reproduction in a diploid-tetraploid contact zone of the facultatively apomictic orchid Zygopetalum mackayi

scientific article published on 17 June 2020

Selective signatures and high genome-wide diversity in traditional Brazilian manioc (Manihot esculenta Crantz) varieties

scientific article published in 2022

Shelter from the storm: Restored populations of the neotropical tree Myroxylon peruiferum are as genetically diverse as those from conserved remnants

article by Kaiser Dias Schwarcz et al published February 2018 in Forest Ecology and Management

Species boundaries inferred from microsatellite markers in the Kielmeyera coriacea complex (Calophyllaceae) and evidence of asymmetric hybridization

scientific article published in 2013

Structural characterization of the H-NS protein from Xylella fastidiosa and its interaction with DNA.

scientific article published on 5 July 2012

Structure of genetic diversity among common bean (Phaseolus vulgaris L.) varieties of Mesoamerican and Andean origins using new developed microsatellite markers

Structure of genetic diversity among common bean (Phaseolus vulgaris L.) varieties of mesoamerican and andean origins using new developed microsatellite markers

Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats

scientific article

Tapping latex and alleles? The impacts of latex and bark harvesting on the genetic diversity of Himatanthus drasticus (Apocynaceae)

scientific article published in 2013

Targeted Development of Microsatellite Markers from Inter-Alu Amplification of YAC Clones

article

Temporal genetic structure of major dengue vector Aedes aegypti from Manaus, Amazonas, Brazil

scientific article published on 11 March 2014

The Genetic Diversity, Conservation, and Use of Passion Fruit (Passiflora spp.)

Three dinucleotide markers on chromosome 21

scientific article published on 01 February 1994

Transcription of succinate dehydrogenase subunit 4 (sdh4) gene in potato: detection of extensive RNA editing and co-transcription with cytochrome oxidase subunit III (cox3) gene

scientific article published on 5 July 2002

Transcriptome profile of Trichoderma harzianum IOC-3844 induced by sugarcane bagasse

scientific article

Two dinucleotide repeats tightly linked to D12S91.

scientific article published in February 1994

Using genetic diversity information to establish core collections of Stylosanthes capitata and Stylosanthes macrocephala.

scientific article

Paulina is supported by:

About Paulina

Help