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List of works by Raymond J. Carroll

A Bayesian analysis of colonic crypt structure and coordinated response to carcinogen exposure incorporating missing crypts

scientific article

A Bayesian multilevel model for estimating the diet/disease relationship in a multicenter study with exposures measured with error: the EPIC study

scientific article published on December 2008

A Comparison Between Maximum Likelihood and Generalized Least Squares in a Heteroscedastic Linear Model

scientific article published in 1982

A Design-Adaptive Local Polynomial Estimator for the Errors-in-Variables Problem

scientific article

A NEW MULTIVARIATE MEASUREMENT ERROR MODEL WITH ZERO-INFLATED DIETARY DATA, AND ITS APPLICATION TO DIETARY ASSESSMENT.

scientific article

A Note on Penalized Regression Spline Estimation in the Secondary Analysis of Case-Control Data

scientific article

A Powerful Bayesian Test for Equality of Means in High Dimensions

scientific article published on 06 August 2018

A ROBUST AND EFFICIENT APPROACH TO CAUSAL INFERENCE BASED ON SPARSE SUFFICIENT DIMENSION REDUCTION.

scientific article

A Review of Statistical Analyses on Physical Activity Data Collected from Accelerometers

scientific article published on 28 June 2019

A Semiparametric Single-Index Risk Score Across Populations.

scientific article

A Study of Mexican Free-Tailed Bat Chirp Syllables: Bayesian Functional Mixed Models for Nonstationary Acoustic Time Series

scientific article

A Two-Sample Test for Equality of Means in High Dimension

scientific article

A bivariate measurement error model for semicontinuous and continuous variables: Application to nutritional epidemiology

scientific article published on 31 August 2015

A chemoprotective fish oil- and pectin-containing diet temporally alters gene expression profiles in exfoliated rat colonocytes throughout oncogenesis.

scientific article

A chemoprotective fish oil/pectin diet enhances apoptosis via Bcl-2 promoter methylation in rat azoxymethane-induced carcinomas.

scientific article published on December 2012

A comparison of a food frequency questionnaire with a 24-hour recall for use in an epidemiological cohort study: results from the biomarker-based Observing Protein and Energy Nutrition (OPEN) study

scientific article published on December 2003

A comparison of regression calibration, moment reconstruction and imputation for adjusting for covariate measurement error in regression

scientific article

A comparison of two dietary instruments for evaluating the fat–breast cancer relationship

scientific article published on 03 May 2006

A debriefing session with a nutritionist can improve dietary assessment using food diaries

scientific article published on 01 February 2006

A fast score test for generalized mixture models

scientific article published on 21 December 2019

A functional generalized method of moments approach for longitudinal studies with missing responses and covariate measurement error

scientific article published on February 2012

A joint modeling and estimation method for multivariate longitudinal data with mixed types of responses to analyze physical activity data generated by accelerometers.

scientific article published on 07 August 2017

A measurement error model for physical activity level as measured by a questionnaire with application to the 1999-2006 NHANES questionnaire

scientific article published on 17 April 2013

A mixed-effects model approach for estimating the distribution of usual intake of nutrients: the NCI method.

scientific article

A new method for dealing with measurement error in explanatory variables of regression models

scientific article published in March 2004

A new statistical method for estimating the usual intake of episodically consumed foods with application to their distribution

scientific article published on October 2006

A note on the effect on power of score tests via dimension reduction by penalized regression under the null

scientific article published on 29 March 2010

A semiparametric efficient estimator in case-control studies for gene-environment independent models

scientific article published on 08 February 2019

A statistical model for measurement error that incorporates variation over time in the target measure, with application to nutritional epidemiology

scientific article

Aberrant crypt foci and semiparametric modeling of correlated binary data.

scientific article

Additive Function-on-Function Regression.

scientific article published on 19 July 2017

Adjustments to improve the estimation of usual dietary intake distributions in the population

scientific article published in July 2004

An Evaluation of Accelerometer-derived Metrics to Assess Daily Behavioral Patterns.

scientific article published on January 2017

An increase in reactive oxygen species by dietary fish oil coupled with the attenuation of antioxidant defenses by dietary pectin enhances rat colonocyte apoptosis

scientific article published on 01 December 2004

Analysis of Case-Control Association Studies: SNPs, Imputation and Haplotypes

scientific article

Analysis of case-control studies of genetic and environmental factors with missing genetic information and haplotype-phase ambiguity

scientific article published on September 2005

Analysis of energy expenditure in diet-induced obese rats

scientific article

Analysis of repeated measures data in nutrition research

scientific article published on 01 June 2019

Analyzing incomplete longitudinal clinical trial data

scientific article

Apigenin and naringenin suppress colon carcinogenesis through the aberrant crypt stage in azoxymethane-treated rats

scientific article

Application of a New Statistical Model for Measurement Error to the Evaluation of Dietary Self-report Instruments

scientific article published on 10 September 2015

Application of survival analysis methodology to the quantitative analysis of LC-MS proteomics data

scientific article

Assessing Response Profiles from Incomplete Longitudinal Clinical Trial Data Under Regulatory Considerations ⬇️

scientific article published on May 1, 2003

Assessing and interpreting treatment effects in longitudinal clinical trials with missing data ⬇️

scientific article published on April 15, 2003

Bayesian Modeling of MPSS Data: Gene Expression Analysis of BovineSalmonellaInfection ⬇️

scientific article published on September 1, 2010

Bayesian Semiparametric Multivariate Density Deconvolution

scientific article published on 13 November 2017

Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis

scientific article

Bayesian methods for expression-based integration of various types of genomics data.

scientific article

Bayesian semiparametric regression in the presence of conditionally heteroscedastic measurement and regression errors

scientific article published on 25 June 2014

Best Practices for Dietary Supplement Assessment and Estimation of Total Usual Nutrient Intakes in Population-Level Research and Monitoring

scientific article published on 01 February 2019

Bias in dietary-report instruments and its implications for nutritional epidemiology

scientific article

Binary regression in truncated samples, with application to comparing dietary instruments in a large prospective study

scientific article published on 25 July 2007

Calibration and seasonal adjustment for matched case-control studies of vitamin D and cancer

scientific article published on 5 January 2016

Categorizing a continuous predictor subject to measurement error.

scientific article

Chemopreventive n-3 polyunsaturated fatty acids reprogram genetic signatures during colon cancer initiation and progression in the rat.

scientific article published on September 2004

Colon cancer cell apoptosis is induced by combined exposure to the n-3 fatty acid docosahexaenoic acid and butyrate through promoter methylation.

scientific article published on 04 February 2014

Comparing automatic and manual image processing in FLARE assay analysis for colon carcinogenesis

scientific article

Comparing onset of antidepressant action using a repeated measures approach and a traditional assessment schedule

scientific article published on 01 July 2006

Constrained Maximum Likelihood Estimation for Model Calibration Using Summary-level Information from External Big Data Sources

scientific article

Controlling the local false discovery rate in the adaptive Lasso ⬇️

scientific article published on 09 April 2013

Correcting for measurement error in fractional polynomial models using Bayesian modelling and regression calibration, with an application to alcohol and mortality

scientific article published on 20 March 2019

Covariate adjusted correlation analysis with application to FMR1 premutation female carrier data

scientific article

Covariate-Adjusted Linear Mixed Effects Model with an Application to Longitudinal Data

scientific article

DNA microarray experiments: biological and technological aspects

scientific article

Deconvolution When Classifying Noisy Data Involving Transformations

scientific article (publication date: September 2012)

Density Estimation in Several Populations With Uncertain Population Membership ⬇️

scientific article published on September 1, 2011

Development and Testing of an Integrated Score for Physical Behaviors

scientific article published on 01 August 2019

Dietary L-arginine supplementation reduces fat mass in Zucker diabetic fatty rats.

scientific article published in April 2005

Differential response to DNA damage may explain different cancer susceptibility between small and large intestine

scientific article published in July 2005

Dimension reduction and estimation in the secondary analysis of case-control studies

scientific article published on 12 June 2018

Distribution of allele frequencies and effect sizes and their interrelationships for common genetic susceptibility variants

scientific article published on 14 October 2011

Effect heterogeneity by a matching covariate in matched case-control studies: a method for graphs-based representation

scientific article published on 01 September 2002

Efficient Semiparametric Marginal Estimation for the Partially Linear Additive Model for Longitudinal/Clustered Data

scientific article

Empirical Performance of Cross-Validation With Oracle Methods in a Genomics Context ⬇️

scientific article published on November 1, 2011

Estimating disease onset from change points of markers measured with error

scientific article published on 30 January 2020

Estimating misclassification error with small samples via bootstrap cross-validation

scientific article published on 2 February 2005

Estimation and Inference in Generalized Additive Coefficient Models for Nonlinear Interactions with High-Dimensional Covariates ⬇️

scientific article

Estimation and inference of error-prone covariate effect in the presence of confounding variables

scientific article published on 2 March 2017

Exact sampling of the unobserved covariates in Bayesian spline models for measurement error problems

scientific article published on 14 June 2015

Exploiting gene-environment independence in family-based case-control studies: increased power for detecting associations, interactions and joint effects

scientific article published on 01 February 2005

Exposure Enriched Case-Control (EECC) Design for the Assessment of Gene-Environment Interaction.

scientific article published on 17 June 2016

Fish Oil Enhances Targeted Apoptosis During Colon Tumor Initiation in Part by Downregulating Bcl-2

article

Fish oil decreases oxidative DNA damage by enhancing apoptosis in rat colon

scientific article

Fish oil increases mitochondrial phospholipid unsaturation, upregulating reactive oxygen species and apoptosis in rat colonocytes

scientific article published in November 2002

Fitting a bivariate measurement error model for episodically consumed dietary components

scientific article published on 6 January 2011

Functional and Structural Methods with Mixed Measurement Error and Misclassification in Covariates

scientific article published in June 2015

Functional multiple indicators, multiple causes measurement error models

scientific article published on 8 May 2017

Generalized Functional Linear Models With Semiparametric Single-Index Interactions ⬇️

scientific article published on June 1, 2010

Generalized empirical likelihood methods for analyzing longitudinal data

scientific article

Genotype‐based association mapping of complex diseases: gene‐environment interactions with multiple genetic markers and measurement error in environmental exposures ⬇️

scientific article published on December 1, 2010

Haplotype-based regression analysis and inference of case-control studies with unphased genotypes and measurement errors in environmental exposures

scientific article

Hierarchical functional data with mixed continuous and binary measurements

scientific article

How many samples are needed to build a classifier: a general sequential approach

scientific article

Identification of important regressor groups, subgroups and individuals via regularization methods: application to gut microbiome data

scientific article

Impact of Novel Sorghum Bran Diets on DSS-Induced Colitis

scientific article

In vivo regulation of colonic cell proliferation, differentiation, apoptosis, and P27Kip1 by dietary fish oil and butyrate in rats

scientific article

Increased risk of early-stage breast cancer related to consumption of sweet foods among women less than age 45 in the United States

scientific article published in December 2002

Inference in a survival cure model with mismeasured covariates using a simulation-extrapolation approach

scientific article published on 3 January 2017

Instrumental variable approach to estimating the scalar-on-function regression model with measurement error with application to energy expenditure assessment in childhood obesity

scientific article published on 20 June 2019

Intake_epis_food(): AnRFunction for Fitting a Bivariate Nonlinear Measurement Error Model to Estimate Usual and Energy Intake for Episodically Consumed Foods ⬇️

scientific article published on March 5, 2012

Is cross-validation better than resubstitution for ranking genes?

scientific article published in January 2004

Is it necessary to correct for measurement error in nutritional epidemiology?

scientific article published on 01 January 2007

Joint modelling of paired sparse functional data using principal components

scientific article

Learning competing risks across multiple hospitals: one-shot distributed algorithms

scholarly article

Linear Model Selection when Covariates Contain Errors

scientific article published on 29 June 2017

Local and Omnibus Goodness-of-Fit Tests in Classical Measurement Error Models ⬇️

scientific article published on January 1, 2011

Longitudinal functional principal component modelling via Stochastic Approximation Monte Carlo ⬇️

scientific article published on June 1, 2010

MALMEM: model averaging in linear measurement error models

scientific article published on 02 June 2019

MODEL AVERAGING BASED ON KULLBACK-LEIBLER DISTANCE.

scientific article published on January 2015

Measurement error correction and sensitivity analysis in longitudinal dietary intervention studies using an external validation study

scientific article published on 06 April 2019

Measurement error models with interactions

scientific article published on 3 November 2015

Measurement of Active and Sedentary Behavior in Context of Large Epidemiologic Studies

scientific article published on 19 September 2017

Methods to Assess Measurement Error in Questionnaires of Sedentary Behavior

scientific article published on 17 March 2016

Methods to assess an exercise intervention trial based on 3-level functional data

scientific article

Modeling data with excess zeros and measurement error: application to evaluating relationships between episodically consumed foods and health outcomes

scientific article

Moment reconstruction and moment-adjusted imputation when exposure is generated by a complex, nonlinear random effects modeling process

scientific article published on 08 April 2016

Multilevel cross-dependent binary longitudinal data

scientific article

Multiple imputation in quantile regression

scientific article

Multiple indicators, multiple causes measurement error models.

scientific article

Noise factor analysis for cDNA microarrays

scientific article published in July 2004

Non-parametric regression estimation from data contaminated by a mixture of Berkson and classical errors

scientific article

Nonparametric Prediction in Measurement Error Models.

scientific article published on September 2009

On the selection of ordinary differential equation models with application to predator-prey dynamical models

scientific article published on 6 October 2014

One-shot distributed algorithms for addressing heterogeneity in competing risks data across clinical sites

scholarly article published in February 2024

Oral administration of interferon tau enhances oxidation of energy substrates and reduces adiposity in Zucker diabetic fatty rats

scientific article published on 27 June 2013

PCAN: Probabilistic correlation analysis of two non-normal data sets

scientific article

Parameter Estimation of Partial Differential Equation Models

scientific article

Parametric and Nonparametric Methods for Understanding the Relationship Between Carcinogen-Induced DNA Adduct Levels in Distal and Proximal Regions of the Colon

article

Parsimonious Model Averaging With a Diverging Number of Parameters

scholarly article

Partially Linear Models with Missing Response Variables and Error-prone Covariates

scientific article

Performance of a food-frequency questionnaire in the US NIH-AARP (National Institutes of Health-American Association of Retired Persons) Diet and Health Study

scientific article

Polyphenol-rich sorghum brans alter colon microbiota and impact species diversity and species richness after multiple bouts of dextran sodium sulfate-induced colitis

scientific article

Predictive functional linear models with diverging number of semiparametric single-index interactions

scientific article published in 2022

Pro-oxidant environment of the colon compared to the small intestine may contribute to greater cancer susceptibility.

scientific article

Quercetin may suppress rat aberrant crypt foci formation by suppressing inflammatory mediators that influence proliferation and apoptosis

scientific article published on 3 December 2008

Radiation exposure and thyroid cancer

scientific article published on 01 August 2006

Rapid publication-ready MS-Word tables for one-way ANOVA.

scientific article

Rapid publication-ready MS-Word tables for two-way ANOVA

scientific article

Reduced Rank Mixed Effects Models for Spatially Correlated Hierarchical Functional Data

scientific article

Regression Calibration Is Valid When Properly Applied ⬇️

scientific article published on May 1, 2013

Regression calibration with more surrogates than mismeasured variables

scientific article published on 29 June 2012

Reply to E Archer and SN Blair

scientific article published on 15 July 2015

Retrospective analysis of haplotype-based case control studies under a flexible model for gene environment association

scientific article published on 08 May 2007

Robust Estimation for Homoscedastic Regression in the Secondary Analysis of Case–Control Data ⬇️

scientific article published on January 1, 2013

Robust methods to correct for measurement error when evaluating a surrogate marker

scientific article published on 06 October 2020

SIMEX and standard error estimation in semiparametric measurement error models

scientific article published on January 2009

STRATOS guidance document on measurement error and misclassification of variables in observational epidemiology: Part 1-Basic theory and simple methods of adjustment

scientific article published on 03 April 2020

STRATOS guidance document on measurement error and misclassification of variables in observational epidemiology: Part 2-More complex methods of adjustment and advanced topics

scientific article published on 03 April 2020

Seemingly unrelated measurement error models, with application to nutritional epidemiology

scientific article

Selecting the Number of Principal Components in Functional Data

scientific article

Semiparametric Bayesian analysis of gene-environment interactions with error in measurement of environmental covariates and missing genetic data ⬇️

scientific article published on January 1, 2011

Semiparametric Estimation in the Secondary Analysis of Case-Control Studies

scientific article published on 15 February 2015

Semiparametric Regression

Ruppert, Wand and Carroll (2003)

Semiparametric analysis of complex polygenic gene-environment interactions in case-control studies

scientific article published on 15 September 2017

Semiparametric bayesian analysis of nutritional epidemiology data in the presence of measurement error

scientific article

Semiparametric regression during 2003-2007.

scientific article

Semiparametric regression splines in matched case-control studies

scientific article published in December 2003

Semiparametrically efficient estimation in quantile regression of secondary analysis

Shrinkage Estimators for Robust and Efficient Inference in Haplotype-Based Case-Control Studies

scientific article published on March 2009

Significance tests for functional data with complex dependence structure

scientific article

Spatial regression with covariate measurement error: A semiparametric approach

scientific article published on 20 January 2016

Statistical issues related to dietary intake as the response variable in intervention trials

scientific article published on 20 June 2016

Statistical models in assessing fold change of gene expression in real-time RT-PCR experiments

scientific article published in February 2006

Structure of dietary measurement error: results of the OPEN biomarker study

scientific article published on July 2003

Structured variable selection with q-values

scientific article published on 10 April 2013

Taking Advantage of the Strengths of 2 Different Dietary Assessment Instruments to Improve Intake Estimates for Nutritional Epidemiology ⬇️

scientific article published on January 24, 2012

Testing and Estimating Shape-Constrained Nonparametric Density and Regression in the Presence of Measurement Error.

scientific article

Testing for constant nonparametric effects in general semiparametric regression models with interactions ⬇️

scientific article published on July 1, 2011

Testing for gene-environment interaction under exposure misspecification.

scientific article

Testing for spatial correlation in nonstationary binary data, with application to aberrant crypt foci in colon carcinogenesis

scientific article published in December 2003

Testing in semiparametric models with interaction, with applications to gene-environment interactions

scientific article published on January 2009

The Hanford Thyroid Disease Study: an alternative view of the findings

scientific article published in February 2007

The Healthy Eating Index-2010 is a valid and reliable measure of diet quality according to the 2010 Dietary Guidelines for Americans

scientific article published on 22 January 2014

The effect of correlation structure on treatment contrasts estimated from incomplete clinical trial data with likelihood-based repeated measures compared with last observation carried forward ANOVA.

scientific article

The impact of stratification by implausible energy reporting status on estimates of diet-health relationships

scientific article

Three-part joint modeling methods for complex functional data mixed with zero-and-one-inflated proportions and zero-inflated continuous outcomes with skewness.

scientific article published on 19 October 2017

Type I error rates from likelihood-based repeated measures analyses of incomplete longitudinal data

article

UNEXPECTED PROPERTIES OF BANDWIDTH CHOICE WHEN SMOOTHING DISCRETE DATA FOR CONSTRUCTING A FUNCTIONAL DATA CLASSIFIER.

scientific article

USE OF MULTIPLE SINGULAR VALUE DECOMPOSITIONS TO ANALYZE COMPLEX INTRACELLULAR CALCIUM ION SIGNALS.

scientific article

Understanding the Relationship between Carcinogen-Induced DNA Adduct Levels in Distal and Proximal Regions of the Colon

scientific article published on 01 January 2003

Using Regression Calibration Equations That Combine Self-Reported Intake and Biomarker Measures to Obtain Unbiased Estimates and More Powerful Tests of Dietary Associations ⬇️

scientific article published on December 1, 2011

Using biomarker data to adjust estimates of the distribution of usual intakes for misreporting: application to energy intake in the US population

scientific article

Using shared genetic controls in studies of gene-environment interactions

scientific article

Validating an FFQ for intake of episodically consumed foods: application to the National Institutes of Health–AARP Diet and Health Study ⬇️

scientific article published on April 13, 2011

Variance estimation in the analysis of microarray data

scientific article

Wavelet-based functional mixed models

scientific article published on April 2006

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