List of works - Julian Hibberd

Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage

scientific article

Redesigning photosynthesis to sustainably meet global food and bioenergy demand

scientific article published on 29 June 2015

TransRate: reference-free quality assessment of de novo transcriptome assemblies

scientific article

An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species

article

Using C4 photosynthesis to increase the yield of rice-rationale and feasibility

scientific article

Characteristics of C4 photosynthesis in stems and petioles of C3 flowering plants

scientific article

The regulation of gene expression required for C4 photosynthesis

scientific article published on January 2010

Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes

scientific article

Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing

scientific article

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

scientific article

Deep evolutionary comparison of gene expression identifies parallel recruitment of trans-factors in two independent origins of C4 photosynthesis

scientific article

The role of proteins in C(3) plants prior to their recruitment into the C(4) pathway

scientific article published on 14 February 2011

Cleome, a genus closely related to Arabidopsis, contains species spanning a developmental progression from C(3) to C(4) photosynthesis

scientific article published on 13 August 2007

C acid decarboxylases required for C photosynthesis are active in the mid-vein of the C species Arabidopsis thaliana, and are important in sugar and amino acid metabolism

scientific article published on 6 October 2009

Accumulation of rotavirus VP6 protein in chloroplasts of transplastomic tobacco is limited by protein stability

scientific article published on 01 May 2004

Independent and Parallel Recruitment of Preexisting Mechanisms Underlying C4 Photosynthesis

scientific article published on 01 March 2011

Phenotypic landscape inference reveals multiple evolutionary paths to C4 photosynthesis

scientific article published on September 28, 2013

Cytosolic pyruvate,orthophosphate dikinase functions in nitrogen remobilization during leaf senescence and limits individual seed growth and nitrogen content

scientific article published on 24 February 2010

The future of C4 research--maize, Flaveria or Cleome?

scientific article

Strategies for engineering a two-celled C(4) photosynthetic pathway into rice

scientific article

Spatial control of transgene expression in rice (Oryza sativa L.) using the GAL4 enhancer trapping system.

scientific article published in March 2005

Molecular evolution of genes recruited into C₄ photosynthesis.

scientific article published on 09 February 2012

The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins

scientific article

Shared origins of a key enzyme during the evolution of C4 and CAM metabolism

scientific article

Transcript residency on ribosomes reveals a key role for the Arabidopsis thaliana bundle sheath in sulfur and glucosinolate metabolism

scientific article published on 23 April 2014

Evolutionary convergence of cell-specific gene expression in independent lineages of C4 grasses

scientific article

Integrating C4 photosynthesis into C3 crops to increase yield potential

scientific article

Lineage-specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales

scientific article

Evolution of GOLDEN2-LIKE gene function in C(3) and C (4) plants

scientific article

The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.

scientific article

Multiple Arabidopsis genes primed for recruitment into C₄ photosynthesis

scientific article published on 14 October 2011

Arabidopsis uses two gluconeogenic gateways for organic acids to fuel seedling establishment

scientific article published on 10 April 2015

The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis possess a novel, unprecedented Ser/Thr protein kinase primary structure

scientific article

RNA-Seq based phylogeny recapitulates previous phylogeny of the genus Flaveria (Asteraceae) with some modifications

scientific article published on 18 June 2015

Photosynthesis in cells around veins of the C(3) plant Arabidopsis thaliana is important for both the shikimate pathway and leaf senescence as well as contributing to plant fitness

scientific article published on 19 March 2009

An Untranslated cis-Element Regulates the Accumulation of Multiple C4 Enzymes in Gynandropsis gynandra Mesophyll Cells.

scientific article published on 15 January 2016

Plastid genome structure and loss of photosynthetic ability in the parasitic genus Cuscuta

scientific article published on 01 August 2005

Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species

scientific article published on 24 March 2016

Expression of green fluorescent protein from bacterial and plastid promoters in tobacco chloroplasts

scientific article published on 01 October 2003

Agrobacterium tumefaciens-mediated transformation of Cleome gynandra L., a C(4) dicotyledon that is closely related to Arabidopsis thaliana.

scientific article published on 11 February 2010

Light-regulated and cell-specific methylation of the maize PEPC promoter

scientific article published on December 5, 2011

Targeted Knockdown of GDCH in Rice Leads to a Photorespiratory-Deficient Phenotype Useful as a Building Block for C4 Rice.

scientific article published on 21 February 2016

Maximizing the potential of multi-parental crop populations

scientific article

Leaf rolling allows quantification of mRNA abundance in mesophyll cells of sorghum.

scientific article

Individual maize chromosomes in the C(3) plant oat can increase bundle sheath cell size and vein density

scientific article

Ancestral light and chloroplast regulation form the foundations for C4 gene expression

scientific article published on 17 October 2016

C4 Photosynthesis in the Rice Paddy: Insights from the Noxious Weed Echinochloa glabrescens.

scientific article published on 2 November 2015

The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis are both bifunctional and interact with the catalytic and nucleotide-binding domains of pyruvate, orthophosphate dikinase

scientific article

Insights into C4 metabolism from comparative deep sequencing

scientific article published on 03 June 2015

Ancient duons may underpin spatial patterning of gene expression in C4 leaves.

scientific article published on 5 February 2018

List of works by Julian Hibberd

Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage

Redesigning photosynthesis to sustainably meet global food and bioenergy demand

TransRate: reference-free quality assessment of de novo transcriptome assemblies

An mRNA blueprint for C4 photosynthesis derived from comparative transcriptomics of closely related C3 and C4 species

Using C4 photosynthesis to increase the yield of rice-rationale and feasibility

Characteristics of C4 photosynthesis in stems and petioles of C3 flowering plants

The regulation of gene expression required for C4 photosynthesis

Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes

Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

Deep evolutionary comparison of gene expression identifies parallel recruitment of trans-factors in two independent origins of C4 photosynthesis

The role of proteins in C(3) plants prior to their recruitment into the C(4) pathway

Cleome, a genus closely related to Arabidopsis, contains species spanning a developmental progression from C(3) to C(4) photosynthesis

C acid decarboxylases required for C photosynthesis are active in the mid-vein of the C species Arabidopsis thaliana, and are important in sugar and amino acid metabolism

Accumulation of rotavirus VP6 protein in chloroplasts of transplastomic tobacco is limited by protein stability

Independent and Parallel Recruitment of Preexisting Mechanisms Underlying C4 Photosynthesis

Phenotypic landscape inference reveals multiple evolutionary paths to C4 photosynthesis

Cytosolic pyruvate,orthophosphate dikinase functions in nitrogen remobilization during leaf senescence and limits individual seed growth and nitrogen content

The future of C4 research--maize, Flaveria or Cleome?

Strategies for engineering a two-celled C(4) photosynthetic pathway into rice

Spatial control of transgene expression in rice (Oryza sativa L.) using the GAL4 enhancer trapping system.

Molecular evolution of genes recruited into C₄ photosynthesis.

The Arabidopsis PPDK gene is transcribed from two promoters to produce differentially expressed transcripts responsible for cytosolic and plastidic proteins

Shared origins of a key enzyme during the evolution of C4 and CAM metabolism

Transcript residency on ribosomes reveals a key role for the Arabidopsis thaliana bundle sheath in sulfur and glucosinolate metabolism

Evolutionary convergence of cell-specific gene expression in independent lineages of C4 grasses

Integrating C4 photosynthesis into C3 crops to increase yield potential

Lineage-specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales

Evolution of GOLDEN2-LIKE gene function in C(3) and C (4) plants

The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.

Multiple Arabidopsis genes primed for recruitment into C₄ photosynthesis

Arabidopsis uses two gluconeogenic gateways for organic acids to fuel seedling establishment

The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis possess a novel, unprecedented Ser/Thr protein kinase primary structure

RNA-Seq based phylogeny recapitulates previous phylogeny of the genus Flaveria (Asteraceae) with some modifications

Photosynthesis in cells around veins of the C(3) plant Arabidopsis thaliana is important for both the shikimate pathway and leaf senescence as well as contributing to plant fitness

An Untranslated cis-Element Regulates the Accumulation of Multiple C4 Enzymes in Gynandropsis gynandra Mesophyll Cells.

Plastid genome structure and loss of photosynthetic ability in the parasitic genus Cuscuta

Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species

Expression of green fluorescent protein from bacterial and plastid promoters in tobacco chloroplasts

Agrobacterium tumefaciens-mediated transformation of Cleome gynandra L., a C(4) dicotyledon that is closely related to Arabidopsis thaliana.

Light-regulated and cell-specific methylation of the maize PEPC promoter

Targeted Knockdown of GDCH in Rice Leads to a Photorespiratory-Deficient Phenotype Useful as a Building Block for C4 Rice.

Maximizing the potential of multi-parental crop populations

Leaf rolling allows quantification of mRNA abundance in mesophyll cells of sorghum.

Individual maize chromosomes in the C(3) plant oat can increase bundle sheath cell size and vein density

Ancestral light and chloroplast regulation form the foundations for C4 gene expression

C4 Photosynthesis in the Rice Paddy: Insights from the Noxious Weed Echinochloa glabrescens.

The pyruvate, orthophosphate dikinase regulatory proteins of Arabidopsis are both bifunctional and interact with the catalytic and nucleotide-binding domains of pyruvate, orthophosphate dikinase

Insights into C4 metabolism from comparative deep sequencing

Ancient duons may underpin spatial patterning of gene expression in C4 leaves.