List of works - Jesús E. Maldonado

A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling

scientific article published on 14 September 2017

A minimally invasive method for gender determination in the prehensile-tailed porcupine (Coendou prehensilis).

scientific article

A study of cutaneous lesions caused by Leishmania mexicana in plasminogen-deficient mice

scientific article published on 2 August 2005

Abundance, density, and social structure of African forest elephants (Loxodonta cyclotis) in a human-modified landscape in southwestern Gabon

scientific article published on 29 April 2020

Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).

scientific article

Ancient wolf lineages in India

scientific article

Canine assistants for conservationists

scientific article published on 01 January 2001

Characterization of microsatellite loci in the Jamaican fruit-eating bat Artibeus jamaicensis and cross-species amplification

scientific article published in 2002

Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (Mustela nigripes)

scientific article published on 30 May 2023

Comparison of genomic diversity and structure of sable antelope (Hippotragus niger) in zoos, conservation centers, and private ranches in North America

scientific article published on 27 April 2020

Concurrent visual encounter sampling validates eDNA selectivity and sensitivity for the endangered wood turtle (Glyptemys insculpta)

scientific article published on 24 April 2019

Conservation archaeogenomics: ancient DNA and biodiversity in the Anthropocene

scientific article published on 11 July 2015

Conservation genetics of the endangered Pampas deer (Ozotoceros bezoarticus)

scientific article

Conservation outside protected areas and the effect of human-dominated landscapes on stress hormones in Savannah elephants

scientific article

Coyote colonization of northern Virginia and admixture with Great Lakes wolves

article

Cryptic population structuring and the role of the Isthmus of Tehuantepec as a gene flow barrier in the critically endangered Central American River Turtle

scientific article

DISCORDANT PATTERNS OF MORPHOLOGICAL VARIATION IN GENETICALLY DIVERGENT POPULATIONS OF ORNATE SHREWS (SOREX ORNATUS)

scientific article published in 2004

Ecological Change on California's Channel Islands from the Pleistocene to the Anthropocene

article by Torben C. Rick et al published 11 July 2014 in BioScience

Endemism and diversity of small mammals along two neighboring Bornean mountains

scientific article published on 08 October 2019

Evolutionary history of endemic Sulawesi squirrels constructed from UCEs and mitogenomes sequenced from museum specimens

scientific article

Familiarity breeds progeny: sociality increases reproductive success in adult male ring-tailed coatis (Nasua nasua) ⬇️

scientific article published on November 18, 2010

Female interactions in harem groups of the Jamaican fruit-eating bat, Artibeus jamaicensis (Chiroptera: Phyllostomidae)

scientific article published in December 2006

First DNA sequence reference library for mammals and plants of the Eastern Mediterranean Region

scientific article published on 01 October 2020

Flightless ducks, giant mice and pygmy mammoths: Late Quaternary extinctions on California's Channel Islands

scholarly article by Torben C. Rick published in March 2012

Forest corridors maintain historical gene flow in a tiger metapopulation in the highlands of central India

scientific article published on 31 July 2013

Front Cover

Gene flow and demographic history of leopards (Panthera pardus) in the central Indian highlands

scientific article published on 06 June 2013

Genetic Variation, Structure, and Gene Flow in a Sloth Bear (Melursus ursinus) Meta-Population in the Satpura-Maikal Landscape of Central India

scientific article published on 6 May 2015

Genetic variation in natural and translocated populations of the endangered Delmarva fox squirrel (Sciurus niger cinereus)

article

Genome sequence, population history, and pelage genetics of the endangered African wild dog (Lycaon pictus).

scientific article

Genomic resources for Asian (Elephas maximus) and African savannah elephant (Loxodonta africana) conservation and health research

scientific article published in 2023

High genetic diversity and distinct ancient lineage of Asiatic black bears revealed by non-invasive surveys in the Annapurna Conservation Area, Nepal

scientific article published in PLoS ONE

High levels of polymorphism found through cross-amplification of microsatellite loci in a Ctenomys pearsoni (Rodentia, Ctenomyidae) population.

scientific article published on 2 April 2013

Identification of novel bacterial biomarkers to detect bird scavenging by invasive rats ⬇️

scientific article published on 19 January 2021

Identification of the endangered small red brocket deer (Mazama bororo) using noninvasive genetic techniques (Mammalia; Cervidae).

scientific article published on 22 January 2009

Identifying source populations and genetic structure for savannah elephants in human-dominated landscapes and protected areas in the Kenya-Tanzania borderlands

scientific article

In-solution hybridization for mammalian mitogenome enrichment: pros, cons and challenges associated with multiplexing degraded DNA.

scientific article published on 28 July 2015

Inbreeding avoidance influences the viability of reintroduced populations of African wild dogs (Lycaon pictus)

scientific article (publication date: 2012)

Integrating archaeology and ancient DNA analysis to address invasive species colonization in the Gulf of Alaska

scientific article published on 17 November 2016

Interglacial refugia on tropical mountains: Novel insights from the summit rat (Rattus baluensis ), a Borneo mountain endemic

scientific article published in 2018

Interspecific variation in microsatellites isolated from tuco-tucos (Rodentia: Ctenomyidae).

scientific article

Kinship shapes affiliative social networks but not aggression in ring-tailed coatis

scientific article

Little genetic structure in a Bornean endemic small mammal across a steep ecological gradient

scientific article published on 10 September 2020

MORPHOMETRIC DIFFERENTIATION OF ENDANGERED PAMPAS DEER (OZOTOCEROS BEZOARTICUS), WITH DESCRIPTION OF NEW SUBSPECIES FROM URUGUAY

scientific article published in 2002

Major histocompatibility complex variation and evolution at a single, expressed DQA locus in two genera of elephants

scientific article

Male dominance, paternity, and relatedness in the Jamaican fruit-eating bat (Artibeus jamaicensis).

scientific article

Mitochondrial genomes suggest rapid evolution of dwarf California Channel Islands foxes (Urocyon littoralis)

scientific article

Mitogenomes and relatedness do not predict frequency of tool-use by sea otters.

scientific article published in March 2017

Molecular Confirmation of the Origin and Invasive Status of West Indian Raccoons

scientific article published in 2008

Molecular Phylogeny Supports Repeated Adaptation to Burrowing within Small-Eared Shrews Genus of Cryptotis (Eulipotyphla, Soricidae)

scientific article

Multiple and ancient origins of the domestic dog

scientific article (publication date: 13 June 1997)

Museomics of tree squirrels: a dense taxon sampling of mitogenomes reveals hidden diversity, phenotypic convergence, and the need of a taxonomic overhaul

scientific article published on 26 June 2020

Nuclear copies of mitochondrial genes: another problem for ancient DNA.

scientific article

Nucleic acid isolation from ecological samples--animal scat and other associated materials

scientific article

Parameterizing Pantherinae: de novo mutation rate estimates from Panthera and Neofelis pedigrees

Patterns of Variation in Cranial Damage Attributable to Skrjabingylus sp. (Nematoda, Metastrongyloidea) in Skunks (Mammalia, Mustelidae) from Mexico

Patterns of genetic diversity in the critically endangered Central American river turtle: human influence since the Mayan age?

Pedigrees and the Study of the Wild Horse Population of Assateague Island National Seashore

scientific article (publication date: July 2010)

Performance of commonly requested destructive museum samples for mammalian genomic studies

scientific article published in 2018

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 - 31 May 2010.

scientific article published in November 2010

Phylogeny of the Procyonidae (Mammalia: Carnivora): molecules, morphology and the Great American Interchange

scientific article

Phylogeny, biogeography and systematic revision of plain long-nosed squirrels (genus Dremomys, Nannosciurinae).

scientific article published on 30 October 2015

Phylogeography of the Golden Jackal (Canis aureus) in India

scientific article published on 28 September 2015

Phylogeography of the gray fox (Urocyon cinereoargenteus) in the eastern United States

article by Christine A. Bozarth et al published 15 April 2011 in Journal of Mammalogy

Phylogeography of vertebrates on the Sunda Shelf: a multi-species comparison

Population Structure of mtDNA Variation due to Pleistocene Fluctuations in the South American Maned Wolf (Chrysocyon brachyurus, Illiger, 1815): Management Units for Conservation.

scientific article

Prioritizing tiger conservation through landscape genetics and habitat linkages

scientific article

Range extension of the Central American Red Brocket, Mazama temama (Kerr, 1792) (Artiodactyla, Cervidae), in Colombia

scientific article published in 2021

Reconstructing the evolutionary history of an endangered subspecies across the changing landscape of the Great Central Valley of California

scientific article

Rediscovery of the Mexican flat-headed bat Myotis planiceps (Vespertilionidae)

Relationships of the Endangered Mexican Kit Fox (Vulpes macrotis zinseri) to North American Arid-Land Foxes Based on Mitochondrial DNA Sequence Data

scientific article published in 1997

Relative Abundance Of Endangered San Joaquin Kit Foxes (Vulpes Macrotis Mutica) Based On Scat–Detection Dog Surveys

Simulation model for contraceptive management of the Assateague Island feral horse population using individual-based data

article

Simultaneous identification of host, ectoparasite and pathogen DNA via in-solution capture

scientific article

Small mammal diversity along two neighboring Bornean mountains

Spatial genetic analysis reveals high connectivity of tiger (Panthera tigris) populations in the Satpura-Maikal landscape of Central India

scientific article published on January 2012

Speciation dynamics in the SE Asian tropics: Putting a time perspective on the phylogeny and biogeography of Sundaland tree squirrels, Sundasciurus

scientific article

Supplementary material 1 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, ge

article

Supplementary material 3 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, ge

article

Taxonomic re-evaluation of New World Eptesicus and Histiotus (Chiroptera: Vespertilionidae), with the description of a new genus ⬇️

scientific article published in 2023

Taxonomic revision of the olingos (Bassaricyon), with description of a new species, the Olinguito

research article

Ten polymorphic microsatellite loci for the endangered Buena Vista Lake shrew (Sorex ornatus relictus)

article

The Taxonomic Status of Mazama bricenii and the Significance of the Táchira Depression for Mammalian Endemism in the Cordillera de Mérida, Venezuela

scientific article published in 2015

The surprising evolutionary history of South American deer

scientific article

Tidal Marshes: A Global Perspective on the Evolution and Conservation of Their Terrestrial Vertebrates

scholarly article by RUSSELL GREENBERG et al published 2006 in BioScience

Tracking the origins and diet of an endemic island canid (Urocyon littoralis) across 7300 years of human cultural and environmental change

scholarly article

Tripartite genetic subdivisions in the ornate shrew (Sorex ornatus)

scientific article (publication date: 2001)

Using DNA metabarcoding to decipher the diet plant component of mammals from the Eastern Mediterranean region

scientific article published in 2021

Using Fecal DNA and Spatial Capture-Recapture to Characterize a Recent Coyote Colonization

scholarly article by Christine A. Bozarth et al published March 2015 in Northeastern Naturalist

Using genetic profiles of African forest elephants to infer population structure, movements, and habitat use in a conservation and development landscape in Gabon

scientific article

Whole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A Resource for Monitoring Diversity in ex Situ and in Situ Populations

scientific article published on 05 June 2019

Whole Genome Sequencing of Procyonids Reveals Distinct Demographic Histories in Kinkajou (Potos Flavus) and Northern Raccoon (Procyon Lotor)

scientific article published on 17 December 2020

List of works by Jesús E. Maldonado

A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, geographic data, and dense sampling

A minimally invasive method for gender determination in the prehensile-tailed porcupine (Coendou prehensilis).

A study of cutaneous lesions caused by Leishmania mexicana in plasminogen-deficient mice

Abundance, density, and social structure of African forest elephants (Loxodonta cyclotis) in a human-modified landscape in southwestern Gabon

Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).

Ancient wolf lineages in India

Canine assistants for conservationists

Characterization of microsatellite loci in the Jamaican fruit-eating bat Artibeus jamaicensis and cross-species amplification

Chromosome-length genome assembly and karyotype of the endangered black-footed ferret (<i>Mustela nigripes</i>)

Comparison of genomic diversity and structure of sable antelope (Hippotragus niger) in zoos, conservation centers, and private ranches in North America

Concurrent visual encounter sampling validates eDNA selectivity and sensitivity for the endangered wood turtle (Glyptemys insculpta)

Conservation archaeogenomics: ancient DNA and biodiversity in the Anthropocene

Conservation genetics of the endangered Pampas deer (Ozotoceros bezoarticus)

Conservation outside protected areas and the effect of human-dominated landscapes on stress hormones in Savannah elephants

Coyote colonization of northern Virginia and admixture with Great Lakes wolves

Cryptic population structuring and the role of the Isthmus of Tehuantepec as a gene flow barrier in the critically endangered Central American River Turtle

DISCORDANT PATTERNS OF MORPHOLOGICAL VARIATION IN GENETICALLY DIVERGENT POPULATIONS OF ORNATE SHREWS (SOREX ORNATUS)

Ecological Change on California's Channel Islands from the Pleistocene to the Anthropocene

Endemism and diversity of small mammals along two neighboring Bornean mountains

Evolutionary history of endemic Sulawesi squirrels constructed from UCEs and mitogenomes sequenced from museum specimens

Familiarity breeds progeny: sociality increases reproductive success in adult male ring-tailed coatis (Nasua nasua) ⬇️

Female interactions in harem groups of the Jamaican fruit-eating bat, Artibeus jamaicensis (Chiroptera: Phyllostomidae)

First DNA sequence reference library for mammals and plants of the Eastern Mediterranean Region

Flightless ducks, giant mice and pygmy mammoths: Late Quaternary extinctions on California's Channel Islands

Forest corridors maintain historical gene flow in a tiger metapopulation in the highlands of central India

Front Cover

Gene flow and demographic history of leopards (Panthera pardus) in the central Indian highlands

Genetic Variation, Structure, and Gene Flow in a Sloth Bear (Melursus ursinus) Meta-Population in the Satpura-Maikal Landscape of Central India

Genetic variation in natural and translocated populations of the endangered Delmarva fox squirrel (Sciurus niger cinereus)

Genome sequence, population history, and pelage genetics of the endangered African wild dog (Lycaon pictus).

Genomic resources for Asian (<i>Elephas maximus</i>) and African savannah elephant (<i>Loxodonta africana</i>) conservation and health research

High genetic diversity and distinct ancient lineage of Asiatic black bears revealed by non-invasive surveys in the Annapurna Conservation Area, Nepal

High levels of polymorphism found through cross-amplification of microsatellite loci in a Ctenomys pearsoni (Rodentia, Ctenomyidae) population.

Identification of novel bacterial biomarkers to detect bird scavenging by invasive rats ⬇️

Identification of the endangered small red brocket deer (Mazama bororo) using noninvasive genetic techniques (Mammalia; Cervidae).

Identifying source populations and genetic structure for savannah elephants in human-dominated landscapes and protected areas in the Kenya-Tanzania borderlands

In-solution hybridization for mammalian mitogenome enrichment: pros, cons and challenges associated with multiplexing degraded DNA.

Inbreeding avoidance influences the viability of reintroduced populations of African wild dogs (Lycaon pictus)

Integrating archaeology and ancient DNA analysis to address invasive species colonization in the Gulf of Alaska

Interglacial refugia on tropical mountains: Novel insights from the summit rat (Rattus baluensis ), a Borneo mountain endemic

Interspecific variation in microsatellites isolated from tuco-tucos (Rodentia: Ctenomyidae).

Kinship shapes affiliative social networks but not aggression in ring-tailed coatis

Little genetic structure in a Bornean endemic small mammal across a steep ecological gradient

MORPHOMETRIC DIFFERENTIATION OF ENDANGERED PAMPAS DEER (OZOTOCEROS BEZOARTICUS), WITH DESCRIPTION OF NEW SUBSPECIES FROM URUGUAY

Major histocompatibility complex variation and evolution at a single, expressed DQA locus in two genera of elephants

Male dominance, paternity, and relatedness in the Jamaican fruit-eating bat (Artibeus jamaicensis).

Mitochondrial genomes suggest rapid evolution of dwarf California Channel Islands foxes (Urocyon littoralis)

Mitogenomes and relatedness do not predict frequency of tool-use by sea otters.

Molecular Confirmation of the Origin and Invasive Status of West Indian Raccoons

Molecular Phylogeny Supports Repeated Adaptation to Burrowing within Small-Eared Shrews Genus of Cryptotis (Eulipotyphla, Soricidae)

Multiple and ancient origins of the domestic dog

Museomics of tree squirrels: a dense taxon sampling of mitogenomes reveals hidden diversity, phenotypic convergence, and the need of a taxonomic overhaul

Nuclear copies of mitochondrial genes: another problem for ancient DNA.

Nucleic acid isolation from ecological samples--animal scat and other associated materials

Parameterizing Pantherinae: de novo mutation rate estimates from Panthera and Neofelis pedigrees

Patterns of Variation in Cranial Damage Attributable to Skrjabingylus sp. (Nematoda, Metastrongyloidea) in Skunks (Mammalia, Mustelidae) from Mexico

Patterns of genetic diversity in the critically endangered Central American river turtle: human influence since the Mayan age?

Pedigrees and the Study of the Wild Horse Population of Assateague Island National Seashore

Performance of commonly requested destructive museum samples for mammalian genomic studies

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 - 31 May 2010.

Phylogeny of the Procyonidae (Mammalia: Carnivora): molecules, morphology and the Great American Interchange

Phylogeny, biogeography and systematic revision of plain long-nosed squirrels (genus Dremomys, Nannosciurinae).

Phylogeography of the Golden Jackal (Canis aureus) in India

Phylogeography of the gray fox (Urocyon cinereoargenteus) in the eastern United States

Phylogeography of vertebrates on the Sunda Shelf: a multi-species comparison

Population Structure of mtDNA Variation due to Pleistocene Fluctuations in the South American Maned Wolf (Chrysocyon brachyurus, Illiger, 1815): Management Units for Conservation.

Prioritizing tiger conservation through landscape genetics and habitat linkages

Range extension of the Central American Red Brocket, Mazama temama (Kerr, 1792) (Artiodactyla, Cervidae), in Colombia

Reconstructing the evolutionary history of an endangered subspecies across the changing landscape of the Great Central Valley of California

Rediscovery of the Mexican flat-headed bat Myotis planiceps (Vespertilionidae)

Relationships of the Endangered Mexican Kit Fox (Vulpes macrotis zinseri) to North American Arid-Land Foxes Based on Mitochondrial DNA Sequence Data

Relative Abundance Of Endangered San Joaquin Kit Foxes (Vulpes Macrotis Mutica) Based On Scat–Detection Dog Surveys

Simulation model for contraceptive management of the Assateague Island feral horse population using individual-based data

Simultaneous identification of host, ectoparasite and pathogen DNA via in-solution capture

Small mammal diversity along two neighboring Bornean mountains

Small mammal diversity along two neighboring Bornean mountains

Spatial genetic analysis reveals high connectivity of tiger (Panthera tigris) populations in the Satpura-Maikal landscape of Central India

Speciation dynamics in the SE Asian tropics: Putting a time perspective on the phylogeny and biogeography of Sundaland tree squirrels, Sundasciurus

Supplementary material 1 from: Gutiérrez EE, Helgen KM, McDonough MM, Bauer F, Hawkins MTR, Escobedo-Morales LA, Patterson BD, Maldonado JE (2017) A gene-tree test of the traditional taxonomy of American deer: the importance of voucher specimens, ge