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List of works by Jörg Stülke

A Central Role for Magnesium Homeostasis during Adaptation to Osmotic Stress

scientific article published on 15 February 2022

A Delicate Connection: c-di-AMP Affects Cell Integrity by Controlling Osmolyte Transport.

scientific article published on 28 September 2017

A Mystery Unraveled: Essentiality of RNase III in Bacillus subtilis Is Caused by Resident Prophages ⬇️

scientific article published on December 27, 2012

A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki

scientific article (publication date: 2009)

A high-frequency mutation in Bacillus subtilis: requirements for the decryptification of the gudB glutamate dehydrogenase gene

scientific article published on 16 December 2011

A jack of all trades: the multiple roles of the unique essential second messenger cyclic di-AMP.

scientific article published on 09 May 2015

A novel factor controlling bistability in Bacillus subtilis: the YmdB protein affects flagellin expression and biofilm formation

scientific article published on 19 August 2011

A novel mode of control of Mycoplasma pneumoniae HPr kinase/phosphatase activity reflects its parasitic lifestyle

scientific article published in October 2002

A protein-dependent riboswitch controlling ptsGHI operon expression in Bacillus subtilis: RNA structure rather than sequence provides interaction specificity

scientific article

A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis: the glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC

scientific article published on 03 July 2007

A trigger enzyme in Mycoplasma pneumoniae: impact of the glycerophosphodiesterase GlpQ on virulence and gene expression

scientific article (publication date: September 2011)

Activation of Escherichia coli antiterminator BglG requires its phosphorylation

scientific article

Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective

scientific article published on 31 March 2014

Adaptation of Bacillus subtilis to Life at Extreme Potassium Limitation.

scientific article published on 5 July 2017

Ammonium utilization in Bacillus subtilis: transport and regulatory functions of NrgA and NrgB.

scientific article published in November 2003

An Essential Poison: Synthesis and Degradation of Cyclic Di-AMP in Bacillus subtilis

scientific journal article

Antagonistic effects of dual PTS-catalysed phosphorylation on the Bacillus subtilis transcriptional activator LevR.

scientific article published in April 1998

Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources

scientific article

Carbon catabolite repression in bacteria: many ways to make the most out of nutrients

scientific article (publication date: August 2008)

Carbon source control of the phosphorylation state of the Bacillus subtilis carbon-flux regulator Crh in vivo.

scientific article

Catabolite repression of -glucanase synthesis in Bacillus subtilis

scientific article published on 01 September 1993

Caught in the act: RNA-Seq provides novel insights into mRNA degradation.

scientific article published on 4 September 2014

CellPublisher: a web platform for the intuitive visualization and sharing of metabolic, signalling and regulatory pathways

scientific article published on 14 October 2010

Changes of DNA topology affect the global transcription landscape and allow rapid growth of a Bacillus subtilis mutant lacking carbon catabolite repression

scientific article published on 11 December 2017

Characterization of Bacillus subtilis mutants with carbon source-independent glutamate biosynthesis

scientific article published in January 2007

Characterization of glucose-repression-resistant mutants of Bacillus subtilis: identification of the glcR gene.

scientific article published in June 2001

Characterization of riboflavin (vitamin B2) transport proteins from Bacillus subtilis and Corynebacterium glutamicum

scientific article

Characterization of the presumptive phosphorylation sites of the Bacillus subtilis glucose permease by site-directed mutagenesis: implication in glucose transport and catabolite repression

scientific article published on 01 November 1997

Complete Genome Sequence of Bacillus subtilis subsp. subtilis Strain ∆6.

scientific article

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

scientific article

Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis

scientific article published on 3 December 2009

Control of potassium homeostasis is an essential function of the second messenger cyclic di-AMP in Bacillus subtilis.

scientific article

Control of the Bacillus subtilis antiterminator protein GlcT by phosphorylation. Elucidation of the phosphorylation chain leading to inactivation of GlcT.

scientific article published on 3 October 2003

Control of the diadenylate cyclase CdaS in Bacillus subtilis: an autoinhibitory domain limits cyclic di-AMP production

scientific article

Control of the glycolytic gapA operon by the catabolite control protein A in Bacillus subtilis: a novel mechanism of CcpA-mediated regulation

scientific article

Control of the phosphorylation state of the HPr protein of the phosphotransferase system in Bacillus subtilis: implication of the protein phosphatase PrpC

scientific article published on 01 January 2007

Control of transcription termination in bacteria by RNA-binding proteins that modulate RNA structures

scientific article

Coping with an essential poison: a genetic suppressor analysis corroborates a key function of c-di-AMP in controlling potassium ion homeostasis in Gram-positive bacteria

scientific article published on 2 April 2018

Coupling physiology and gene regulation in bacteria: the phosphotransferase sugar uptake system delivers the signals

scientific article published on 01 December 1998

Crh, the paralogue of the phosphocarrier protein HPr, controls the methylglyoxal bypass of glycolysis in Bacillus subtilis

scientific journal article

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium.

scientific article published on 28 February 2012

Crystal structure of HPr kinase/phosphatase from Mycoplasma pneumoniae

scientific article (publication date: 28 February 2003)

Crystallization, preliminary X-ray analysis and biophysical characterization of HPr kinase/phosphatase of Mycoplasma pneumoniae

scientific article published on 21 February 2002

Cyclic di-AMP homeostasis in bacillus subtilis: both lack and high level accumulation of the nucleotide are detrimental for cell growth

scientific journal article

Cyclic-di-GMP signalling meets extracellular polysaccharide synthesis in Bacillus subtilis

scientific article published on 13 March 2017

DEAD-Box RNA helicases in Bacillus subtilis have multiple functions and act independently from each other

scientific article published on 21 November 2012

Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium

scientific article

Detection of a 2 μ derivative yeast plasmid with altered properties

scientific article published on 01 January 1990

Determinants of interaction specificity of the Bacillus subtilis GlcT antitermination protein: functionality and phosphorylation specificity depend on the arrangement of the regulatory domains.

scientific article published on 21 June 2012

Development of a replicating plasmid based on the native oriC in Mycoplasma pneumoniae

scientific article published on 25 September 2018

Dual phosphorylation of Mycoplasma pneumoniae HPr by Enzyme I and HPr kinase suggests an extended phosphoryl group susceptibility of HPr.

scientific article

Dynamic localization of a transcription factor in Bacillus subtilis: the LicT antiterminator relocalizes in response to inducer availability

scientific article published on 8 March 2013

Erratum to: Of ions and messengers: an intricate link between potassium, glutamate, and cyclic di-AMP.

scientific article

Essential genes in Bacillus subtilis: a re-evaluation after ten years

scientific article

Essential role of the hprK gene in Ralstonia eutropha H16.

scientific article published on 6 August 2009

Essentiality of c-di-AMP in Bacillus subtilis: Bypassing mutations converge in potassium and glutamate homeostasis

scientific article published on 22 January 2021

Expression of CD83 is regulated by HuR via a novel cis-active coding region RNA element

scientific article published on 16 February 2006

Expression of Mycoplasma proteins carrying an affinity tag in M. pneumoniae allows rapid purification and circumvents problems related to the aberrant genetic code

scientific article published on 12 October 2007

Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon.

scientific article published on March 2003

Far from being well understood: multiple protein phosphorylation events control cell differentiation in Bacillus subtilis at different levels

scientific article published on 10 December 2014

Functional dissection of a trigger enzyme: mutations of the bacillus subtilis glutamate dehydrogenase RocG that affect differentially its catalytic activity and regulatory properties

scientific article

Genetic Engineering of Co-producing Antigen and the Mucosal Adjuvant 3' 5'- cyclic di Adenosine Monophosphate (c-di-AMP) as a Design Strategy to Develop a Mucosal Vaccine Prototype

scientific article published on 04 September 2018

Genetic dissection of specificity determinants in the interaction of HPr with enzymes II of the bacterial phosphoenolpyruvate:sugar phosphotransferase system in Escherichia coli

scientific article published on 20 April 2007

Glutamate metabolism in Bacillus subtilis: gene expression and enzyme activities evolved to avoid futile cycles and to allow rapid responses to perturbations of the system

scientific journal article

Glycerol metabolism and its implication in virulence in Mycoplasma

scientific article

Glycerol metabolism is important for cytotoxicity of Mycoplasma pneumoniae

scientific article published on 21 November 2008

HPr kinase/phosphatase of Bacillus subtilis: expression of the gene and effects of mutations on enzyme activity, growth and carbon catabolite repression

scientific article published on 01 June 2002

Hierarchical mutational events compensate for glutamate auxotrophy of a Bacillus subtilis gltC mutant.

scientific article

Hydrogen sulfide is a novel potential virulence factor of Mycoplasma pneumoniae: characterization of the unusual cysteine desulfurase/desulfhydrase HapE

scientific article published on 09 February 2016

Identification of c-di-AMP-Binding Proteins Using Magnetic Beads.

scientific article published in January 2017

Identification of the Components Involved in Cyclic Di-AMP Signaling in Mycoplasma pneumoniae

scientific article published on 13 July 2017

Identification, characterization, and structure analysis of the cyclic di-AMP-binding PII-like signal transduction protein DarA.

scientific article

Impact of Hfq on the Bacillus subtilis transcriptome

scientific article

Implication of glycerol and phospholipid transporters in Mycoplasma pneumoniae growth and virulence

scientific article published on 7 January 2013

In vitro phosphorylation of key metabolic enzymes from Bacillus subtilis: PrkC phosphorylates enzymes from different branches of basic metabolism

scientific article published on 13 April 2010

In vivo activity of enzymatic and regulatory components of the phosphoenolpyruvate:sugar phosphotransferase system in Mycoplasma pneumoniae

scientific article

In-cell architecture of an actively transcribing-translating expressome

scientific article published on 01 July 2020

Insufficient expression of the ilv-leu operon encoding enzymes of branched-chain amino acid biosynthesis limits growth of a Bacillus subtilis ccpA mutant

scientific article published on September 2002

Interaction of the membrane-bound GlnK-AmtB complex with the master regulator of nitrogen metabolism TnrA in Bacillus subtilis

scientific article published on 25 September 2006

Interactions between glycolytic enzymes of Mycoplasma pneumoniae

scientific article published on 6 October 2010

Keeping signals straight in transcription regulation: specificity determinants for the interaction of a family of conserved bacterial RNA-protein couples

scientific article published on 29 October 2006

Large-scale reduction of the Bacillus subtilis genome: consequences for the transcriptional network, resource allocation, and metabolism

scientific article

Less is more: towards a genome-reduced Bacillus cell factory for 'difficult proteins'

scientific article published on 27 December 2018

LicT, a Bacillus subtilis transcriptional antiterminator protein of the BglG family

scientific article

Localization of Components of the RNA-Degrading Machine in Bacillus subtilis

scientific article published on 21 September 2016

Making and Breaking of an Essential Poison: the Cyclases and Phosphodiesterases That Produce and Degrade the Essential Second Messenger Cyclic di-AMP in Bacteria.

scientific article

Malate metabolism in Bacillus subtilis: distinct roles for three classes of malate-oxidizing enzymes

scientific article

Malate-mediated carbon catabolite repression in Bacillus subtilis involves the HPrK/CcpA pathway

scientific article published on 14 October 2011

Minor Cause--Major Effect: A Novel Mode of Control of Bistable Gene Expression

scientific article published on 25 June 2015

More than just activity control: phosphorylation may control all aspects of a protein's properties

scientific article published on 24 May 2010

Multiple-mutation reaction: a method for simultaneous introduction of multiple mutations into the glpK gene of Mycoplasma pneumoniae

scientific article published on July 2005

Mutational activation of the RocR activator and of a cryptic rocDEF promoter bypass loss of the initial steps of proline biosynthesis in Bacillus subtilis

scientific article published on 19 July 2013

Mycoplasma pneumoniae HPr kinase/phosphorylase

scientific article

Mycoplasma pneumoniae thymidine phosphorylase

scientific article published on January 2014

New beta-glucoside (bgl) genes in Bacillus subtilis: the bglP gene product has both transport and regulatory functions similar to those of BglF, its Escherichia coli homolog.

scientific article published on March 1995

Novel activities of glycolytic enzymes in Bacillus subtilis: interactions with essential proteins involved in mRNA processing

scientific article (publication date: June 2009)

PRD — a protein domain involved in PTS‐dependent induction and carbon catabolite repression of catabolic operons in bacteria ⬇️

scientific article published on June 1, 1998

Perspective of ions and messengers: an intricate link between potassium, glutamate, and cyclic di-AMP.

scientific article

Phosphotransferase protein EIIANtr interacts with SpoT, a key enzyme of the stringent response, in Ralstonia eutropha H16.

scientific article

Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: evidence for a metabolon.

scientific article published on 8 October 2010

Prevention of cross-talk in conserved regulatory systems: identification of specificity determinants in RNA-binding anti-termination proteins of the BglG family ⬇️

scientific article published on 28 January 2011

Probing in vivo promoter activities in Mycoplasma pneumoniae: a system for generation of single-copy reporter constructs

scientific article published in February 2006

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases

scientific article published on 08 May 2012

RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y

scientific article published on 04 August 2011

RNase Y in Bacillus subtilis: a Natively disordered protein that is the functional equivalent of RNase E from Escherichia coli

scientific journal article

Recent Advances and Current Trends in Nucleotide Second Messenger Signaling in Bacteria

scientific article published on 19 January 2019

Regulation of carbon catabolism in Bacillus species.

scientific article

Regulation of carbon metabolism in the mollicutes and its relation to virulence

Regulation of citB expression in Bacillus subtilis: integration of multiple metabolic signals in the citrate pool and by the general nitrogen regulatory system

scientific article published on 5 January 2006

Regulation of the Bacillus subtilis GlcT Antiterminator Protein by Components of the Phosphotransferase System ⬇️

scientific article published on October 1, 1998

Regulation of the glucose-specific phosphotransferase system (PTS) of Staphylococcus carnosus by the antiterminator protein GlcT.

scientific article published in September 2000

Regulation of virulence in Bacillus anthracis: the phosphotransferase system transmits the signals

scientific article published on 01 February 2007

Regulation of xylanolytic enzymes in Bacillus subtilis

scientific article published on 01 April 1994

Regulatory links between carbon and nitrogen metabolism

scientific article

Regulatory potential of post-translational modifications in bacteria

scientific article published on 28 May 2015

Regulatory protein phosphorylation in Mycoplasma pneumoniae. A PP2C-type phosphatase serves to dephosphorylate HPr(Ser-P)

scientific article published on 20 July 2006

Resistance to serine in Bacillus subtilis: Identification of the serine transporter YbeC and of a metabolic network that links serine and threonine metabolism

scientific article published on 02 August 2020

SPABBATS: A pathway-discovery method based on Boolean satisfiability that facilitates the characterization of suppressor mutants

scientific article

SPINE: a method for the rapid detection and analysis of protein-protein interactions in vivo

scientific journal article

Second Messenger Signaling in Bacillus subtilis: Accumulation of Cyclic di-AMP Inhibits Biofilm Formation

scientific article published on 25 May 2016

Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability

scientific article published on 04 September 2018

Specific interaction of the RNA-binding domain of the bacillus subtilis transcriptional antiterminator GlcT with its RNA target, RAT.

scientific article

Structural and biochemical analysis of the essential diadenylate cyclase CdaA from Listeria monocytogenes

scientific journal article

Structural basis for the regulatory interaction of the methylglyoxal synthase MgsA with the carbon flux regulator Crh in

scientific article published in Journal of Biological Chemistry

SubtiWiki 2.0--an integrated database for the model organism Bacillus subtilis

scientific article

SubtiWiki in 2018: from genes and proteins to functional network annotation of the model organism Bacillus subtilis.

scientific article published on 9 October 2017

SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis

scientific article

SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information

scientific article published on 30 October 2013

Sustained sensing in potassium homeostasis: Cyclic di-AMP controls potassium uptake by KimA at the levels of expression and activity

scientific article published on 06 May 2019

SynWiki: Functional annotation of the first artificial organism Mycoplasma mycoides JCVI-syn3A

scientific article published on 20 September 2021

Temporal activation of -glucanase synthesis in Bacillus subtilis is mediated by the GTP pool

scientific article published on 01 September 1993

The Bacillus subtilis Minimal Genome Compendium

scientific article published in 2021

The Bacillus subtilis crh gene encodes a HPr-like protein involved in carbon catabolite repression

scientific article published on August 1997

The Blueprint of a Minimal Cell: MiniBacillus

scientific article published on 28 September 2016

The DEAD-Box RNA Helicases of as a Model to Evaluate Genetic Compensation Among Duplicate Genes

article

The HPr protein of the phosphotransferase system links induction and catabolite repression of the Bacillus subtilis levanase operon.

scientific article published on December 1995

The Highly Conserved Asp23 Family Protein YqhY Plays a Role in Lipid Biosynthesis in Bacillus subtilis

scientific article published on 19 May 2017

The KupA and KupB Proteins of Lactococcus lactis IL1403 Are Novel c-di-AMP Receptor Proteins Responsible for Potassium Uptake

scientific article published on 24 April 2019

The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex

scientific article published on 21 June 2010

The RsbRST stress module in bacteria: a signalling system that may interact with different output modules

scientific article

The YmdB Phosphodiesterase Is a Global Regulator of Late Adaptive Responses in Bacillus subtilis

scientific article

The acidic, glutamine-rich Mpn474 protein of Mycoplasma pneumoniae is surface exposed and covers the complete cell.

scientific article published in April 2008

The catabolite control protein CcpA controls ammonium assimilation in Bacillus subtilis

scientific article published on 01 August 1999

The contribution of bacterial genome engineering to sustainable development

scientific article published on 3 August 2017

The current state of SubtiWiki, the database for the model organism Bacillus subtilis

scientific article published on 01 January 2022

The general stress protein Ctc of Bacillus subtilis is a ribosomal protein

scientific article published on 01 September 2002

The phosphoenolpyruvate:sugar phosphotransferase system is involved in sensitivity to the glucosylated bacteriocin sublancin.

scientific article

The phosphoproteome of the minimal bacterium Mycoplasma pneumoniae: analysis of the complete known Ser/Thr kinome suggests the existence of novel kinases

scientific article

The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis

scientific article published on 03 February 2014

The regulatory link between carbon and nitrogen metabolism in Bacillus subtilis: regulation of the gltAB operon by the catabolite control protein CcpA.

scientific article published in October 2003

The stability of cytadherence proteins in Mycoplasma pneumoniae requires activity of the protein kinase PrkC.

scientific article published on 26 October 2009

ThrR, a DNA-binding transcription factor involved in controlling threonine biosynthesis in Bacillus subtilis.

scientific article published on 4 June 2016

Tools for the genetic analysis of Mycoplasma

scientific article published on 16 January 2007

Topoisomerase IV can functionally replace all type 1A topoisomerases in Bacillus subtilis.

scientific article

Transcription in Mycoplasma pneumoniae: analysis of the promoters of the ackA and ldh genes

scientific article published on 09 June 2007

Transcriptional and metabolic responses of Bacillus subtilis to the availability of organic acids: transcription regulation is important but not sufficient to account for metabolic adaptation

scientific article published on 22 November 2006

Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways

scientific article published in April 2003

Trigger Enzymes: Coordination of Metabolism and Virulence Gene Expression

scientific article published on August 2015

Trigger enzymes: bifunctional proteins active in metabolism and in controlling gene expression

scientific article published on 11 December 2007

Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon.

scientific article published on December 1995

Two roles for aconitase in the regulation of tricarboxylic acid branch gene expression in Bacillus subtilis

scientific journal article

Upregulation of thymidine kinase activity compensates for loss of thymidylate synthase activity in Mycoplasma pneumoniae

scientific article

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