List of works - Andreas Wilke

The RAST Server: rapid annotations using subsystems technology

scientific article

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

2012 scientific article

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

scientific article

The MG-RAST metagenomics database and portal in 2015

scientific article

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

scientific article

A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE.

scientific article

A RESTful API for Accessing Microbial Community Data for MG-RAST

scientific article published on January 8, 2015

Connecting genotype to phenotype in the era of high-throughput sequencing.

scientific article published on 21 March 2011

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment.

scientific article

Synergistic use of plant-prokaryote comparative genomics for functional annotations

scientific article

MG-RAST version 4-lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis

scientific article published on 26 September 2017

Short-read reading-frame predictors are not created equal: sequence error causes loss of signal

scientific article

Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology

scientific article

Bioinformatics support for high-throughput proteomics

scientific article published on December 2003

A metagenomics portal for a democratized sequencing world

scientific article

List of works by Andreas Wilke

The RAST Server: rapid annotations using subsystems technology

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

The MG-RAST metagenomics database and portal in 2015

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE.

A RESTful API for Accessing Microbial Community Data for MG-RAST

Connecting genotype to phenotype in the era of high-throughput sequencing.

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment.

Synergistic use of plant-prokaryote comparative genomics for functional annotations

MG-RAST version 4-lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis

Short-read reading-frame predictors are not created equal: sequence error causes loss of signal

Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology

Bioinformatics support for high-throughput proteomics

A metagenomics portal for a democratized sequencing world

An experience report: porting the MG-RAST rapid metagenomics analysis pipeline to the cloud

A scalable data analysis platform for metagenomics

The MG-RAST API explorer: an on-ramp for RESTful query composition

Analysis of Shotgun Metagenomes with MG-RAST.