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List of works by Masahiro Yano

A comprehensive rice transcript map containing 6591 expressed sequence tag sites

scientific article

A follow-up study for biomass yield QTLs in rice

scientific article published in PLoS ONE

A loss-of-function mutation of rice DENSE PANICLE 1 causes semi-dwarfness and slightly increased number of spikelets

scientific article published in 2011

A major quantitative trait locus for increasing cadmium-specific concentration in rice grain is located on the short arm of chromosome 7.

scientific article

A natural variant of NAL1, selected in high-yield rice breeding programs, pleiotropically increases photosynthesis rate

scientific article published on January 2013

A novel cytochrome P450 is implicated in brassinosteroid biosynthesis via the characterization of a rice dwarf mutant, dwarf11, with reduced seed length

scientific article published on 10 February 2005

A novel factor FLOURY ENDOSPERM2 is involved in regulation of rice grain size and starch quality

scientific article published in October 2010

A novel kinesin 13 protein regulating rice seed length

scientific article published on 29 June 2010

A novel rice cytochrome P450 gene, CYP72A31, confers tolerance to acetolactate synthase-inhibiting herbicides in rice and Arabidopsis

scientific article published on 9 January 2014

A pair of floral regulators sets critical day length for Hd3a florigen expression in rice

scientific article published on 13 June 2010

Adaptation of photoperiodic control pathways produces short-day flowering in rice

scientific article published in April 2003

Advanced backcross QTL analysis reveals complicated genetic control of rice grain shape in a japonica × indica cross

scientific article

An SNP caused loss of seed shattering during rice domestication

scientific article published on 13 April 2006

An integrated high-density linkage map of soybean with RFLP, SSR, STS, and AFLP markers using A single F2 population

scientific article published on December 2007

Characterization and functional analysis of three wheat genes with homology to the CONSTANS flowering time gene in transgenic rice

scientific article published in October 2003

Characterization of a new rice glutelin gene GluD-1 expressed in the starchy endosperm

scientific article

Characterization of a rice variety with high hydraulic conductance and identification of the chromosome region responsible using chromosome segment substitution lines ⬇️

scientific article published on September 1, 2010

Characterization of the silicon uptake system and molecular mapping of the silicon transporter gene in rice

scientific article published on 24 September 2004

Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport ⬇️

scientific article published on February 24, 2012

Chromosomal locations of a gene underlying heat-accelerated brown spot formation and its suppressor genes in rice

scientific article published on 23 December 2014

Chromosomal regions with quantitative trait loci controlling cadmium concentration in brown rice (Oryza sativa).

scientific article published on November 2005

Cloning of quantitative trait genes from rice reveals conservation and divergence of photoperiod flowering pathways in Arabidopsis and rice

scientific article

Comparative mapping of the barley Ppd-H1 photoperiod response gene region, which lies close to a junction between two rice linkage segments

scientific article

Comparative sequence analyses of the major quantitative trait locus phosphorus uptake 1 (Pup1) reveal a complex genetic structure.

scientific article published in June 2009

Conservation of Genome Structure Between Rice and Wheat

Construction of pseudomolecule sequences of the aus rice cultivar Kasalath for comparative genomics of Asian cultivated rice

scientific article

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

scientific article published on 4 August 2013

Correction to: Genetic diversity of arsenic accumulation in rice and QTL analysis of methylated arsenic in rice grains.

scientific article published on 24 April 2018

DNA changes tell us about rice domestication

scientific article published on April 2009

Deletion in a gene associated with grain size increased yields during rice domestication

scientific article published on 6 July 2008

Detection and verification of QTLs associated with heat-induced quality decline of rice (Oryza sativa L.) using recombinant inbred lines and near-isogenic lines

scientific article published on September 2013

Detection of QTL for exudation rate at ripening stage in rice and its contribution to hydraulic conductance

scientific article published on 28 August 2015

Detection of QTLs for white-back and basal-white grains caused by high temperature during ripening period in japonica rice

scientific article published on June 2015

Detection of QTLs to reduce cadmium content in rice grains using LAC23/Koshihikari chromosome segment substitution lines.

scientific article published on September 2013

Detection of a quantitative trait locus controlling carbon isotope discrimination and its contribution to stomatal conductance in japonica rice

scientific article published on 26 February 2009

Detection of heading date QTLs in advanced-backcross populations of an elite indica rice cultivar, IR64

scientific article published on 09 May 2019

Detection of novel QTLs qDTH4.5 and qDTH6.3, which confer late heading under short-day conditions, by SSR marker-based and QTL-seq analysis.

scientific article published on 4 March 2017

Detection of quantitative trait loci controlling pre-harvest sprouting resistance by using backcrossed populations of japonica rice cultivars.

scientific article

Development of 12 sets of chromosome segment substitution lines that enhance allele mining in Asian cultivated rice

scientific article published in 2023

Development of Isogenic Lines of Rice Cultivar Koshihikari with Early and Late Heading by Marker-assisted Selection

scientific article published in 2006

Development of genome-wide simple sequence repeat markers using whole-genome shotgun sequences of sorghum (Sorghum bicolor (L.) Moench).

scientific article published on 10 April 2009

Discovery of Genome-Wide DNA Polymorphisms in a Landrace Cultivar of Japonica Rice by Whole-Genome Sequencing ⬇️

scientific article published on January 21, 2011

Diverse variation of reproductive barriers in three intraspecific rice crosses

scientific article

Dro1, a major QTL involved in deep rooting of rice under upland field conditions

scientific article published on 6 January 2011

Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication ⬇️

scientific article published on October 5, 2010

Ef7 encodes an ELF3-like protein and promotes rice flowering by negatively regulating the floral repressor gene Ghd7 under both short- and long-day conditions

scientific article published on 14 March 2012

Effect of advanced intercrossing on genome structure and on the power to detect linked quantitative trait loci in a multi-parent population: a simulation study in rice

scientific article

Effective Production of RFLP Markers between Closely Related Varieties of Rice by Genomic Subtraction

article published in 1996

Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1

scientific article published on 12 April 2004

Ehd2, a rice ortholog of the maize INDETERMINATE1 gene, promotes flowering by up-regulating Ehd1.

scientific article

Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering

scientific article published on 09 March 2011

Fine Mapping and Characterization of Quantitative Trait Loci Hd4 and Hd5 Controlling Heading Date in Rice.

scientific article published in 2003

Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms

scientific article

Fine mapping of RBG2, a quantitative trait locus for resistance to Burkholderia glumae, on rice chromosome 1

scientific article

Fine-mapping of qRL6.1, a major QTL for root length of rice seedlings grown under a wide range of NH4(+) concentrations in hydroponic conditions

scientific article

From laboratory to field: OsNRAMP5-knockdown rice is a promising candidate for Cd phytoremediation in paddy fields

scientific article

Gene pyramiding enhances durable blast disease resistance in rice

scientific article published on 14 January 2015

Genetic architecture of variation in heading date among Asian rice accessions.

scientific article published on 8 May 2015

Genetic control of flowering time in rice: integration of Mendelian genetics and genomics.

scientific article

Genetic dissection and pyramiding of quantitative traits for panicle architecture by using chromosomal segment substitution lines in rice

scientific article published on 15 February 2008

Genetic dissection of agronomically important traits in closely related temperate japonica rice cultivars.

scientific article published on 15 November 2017

Genetic dissection of pre-harvest sprouting resistance in an upland rice cultivar.

scientific article published on 27 March 2018

Genetic diversity of arsenic accumulation in rice and QTL analysis of methylated arsenic in rice grains

scientific article

Genetic improvement for root growth angle to enhance crop production

scientific article

Genetic interactions involved in the inhibition of heading by heading date QTL, Hd2 in rice under long-day conditions ⬇️

scientific article published on July 26, 2011

Genetic mechanisms underlying yield potential in the rice high-yielding cultivar Takanari, based on reciprocal chromosome segment substitution lines

scientific article

Genome-Wide Haplotype Changes Produced by Artificial Selection during Modern Rice Breeding in Japan ⬇️

scientific article published on March 13, 2012

Genome-wide DNA polymorphisms in seven rice cultivars of temperate and tropical japonica groups

scientific article published on 21 January 2014

Genome-wide indel markers shared by diverse Asian rice cultivars compared to Japanese rice cultivar 'Koshihikari'.

scientific article published on June 2015

Genomic adaptation of flowering-time genes during the expansion of rice cultivation area

scientific article published on 23 March 2018

Genomic regions involved in yield potential detected by genome-wide association analysis in Japanese high-yielding rice cultivars.

scientific article

HapRice, an SNP haplotype database and a web tool for rice

scientific article published on 13 December 2013

Haplotype-based allele mining in the Japan-MAGIC rice population.

scientific article

Hd1,a CONSTANS ortholog in rice, functions as an Ehd1 repressor through interaction with monocot-specific CCT-domain protein Ghd7.

scientific article published on 15 March 2016

Hd16, a gene for casein kinase I, is involved in the control of rice flowering time by modulating the day-length response

scientific article

Hd18, Encoding Histone Acetylase Related to Arabidopsis FLOWERING LOCUS D, is Involved in the Control of Flowering Time in Rice

scientific article published on 18 June 2016

Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions

scientific article published in October 2002

Hybrid breakdown caused by epistasis-based recessive incompatibility in a cross of rice (Oryza sativa L.).

scientific article published on 26 November 2014

Identification and Characterization of a Quantitative Trait Locus, Hd9, Controlling Heading Date in Rice.

scientific article published in 2002

Identification and characterization of a QTL on chromosome 2 for cytosolic glutamine synthetase content and panicle number in rice

scientific article published on 10 November 2004

Identification of a novel major quantitative trait locus controlling distribution of Cd between roots and shoots in rice

scientific article published on 01 December 2009

Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields

article by Yusaku Uga et al published January 2012 in Theoretical and Applied Genetics

Identification of rice Allene Oxide Cyclase mutants and the function of jasmonate for defence against Magnaporthe oryzae.

scientific article published on 4 March 2013

Improvement of Rice Biomass Yield through QTL-Based Selection.

scientific article

Isolation of a novel lodging resistance QTL gene involved in strigolactone signaling and its pyramiding with a QTL gene involved in another mechanism

scientific article published on 06 November 2014

Isolation of a novel lodging resistance QTL gene involved in strigolactone signaling and its pyramiding with a QTL gene involved in another mechanism

scientific article published on 15 December 2014

Koshihikari: a premium short-grain rice cultivar - its expansion and breeding in Japan.

scientific article published on 9 April 2018

Late flowering in F1 hybrid rice brought about by the complementary effect of quantitative trait loci

scientific article published on 20 August 2019

Loss of function of a proline-containing protein confers durable disease resistance in rice

scientific article published in August 2009

Mapping a quantitative trait locus for resistance to bacterial grain rot in rice

scientific article published on 21 May 2013

Mapping and validation of QTLs for rice sheath blight resistance

scientific article published on September 2013

Molecular distinction in genetic regulation of nonphotochemical quenching in rice ⬇️

scientific article

Mutation in <i>OsLMS</i>, a gene encoding a protein with two double-stranded RNA binding motifs, causes lesion mimic phenotype and early senescence in rice (<i>Oryza sativa</i> L.) ⬇️

scientific article published on 01 January 2012

Natural Variation in the Flag Leaf Morphology of Rice Due to a Mutation of the NARROW LEAF 1 Gene in Oryza sativa L

scientific article

Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering

scientific article published on 06 March 2012

Natural variation in rice starch synthase IIa affects enzyme and starch properties

scientific article published on 01 August 2004

Natural variation of the RICE FLOWERING LOCUS T 1 contributes to flowering time divergence in rice

scientific article

New approach for rice improvement using a pleiotropic QTL gene for lodging resistance and yield

scientific article

OGRO: The Overview of functionally characterized Genes in Rice online database

scientific article published on 24 September 2012

Os-GIGANTEA confers robust diurnal rhythms on the global transcriptome of rice in the field

scientific article

Physical maps and recombination frequency of six rice chromosomes

scientific article published on 01 December 2003

Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice

scientific article published on August 2002

Prospects and perspectives of breeding science ⬇️

scholarly article

QTLs for Resistance to Major Rice Diseases Exacerbated by Global Warming: Brown Spot, Bacterial Seedling Rot, and Bacterial Grain Rot

scientific article

RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa).

scientific article published on 13 August 2014

Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses

scientific article published on 15 September 2011

Response of rice to Al stress and identification of quantitative trait Loci for Al tolerance

scientific article published in June 2002

Small and round seed 5 gene encodes alpha-tubulin regulating seed cell elongation in rice

scientific article published on 27 February 2012

SmartGrain: High-Throughput Phenotyping Software for Measuring Seed Shape through Image Analysis ⬇️

scientific article published on October 10, 2012

Switching genetic effects of the flowering time gene in LD conditions by and in rice

article

The Birth of a Black Rice Gene and Its Local Spread by Introgression

scientific article

The SMALL AND ROUND SEED1 (SRS1/DEP2) gene is involved in the regulation of seed size in rice ⬇️

scientific article published on January 1, 2010

The genome sequence and structure of rice chromosome 1.

scientific article published in November 2002

The mesophyll anatomy enhancing CO2 diffusion is a key trait for improving rice photosynthesis.

scientific article

The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria

scientific article published on 28 August 2007

The role of casein kinase II in flowering time regulation has diversified during evolution

scientific article published on 9 December 2009

Towards the understanding of complex traits in rice: substantially or superficially?

scientific article published on 09 April 2009

Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance

scientific article published on 20 October 2008

Uncovering of major genetic factors generating naturally occurring variation in heading date among Asian rice cultivars

scientific article

Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice ⬇️

scientific article published on November 1, 2012

[Floral transition around summer solstice of rice, a short-day plant: What occurred in rice domestication?]

scientific article published on 01 December 2007

qUVR-10, a major quantitative trait locus for ultraviolet-B resistance in rice, encodes cyclobutane pyrimidine dimer photolyase

scientific article published on 18 June 2005

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