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List of works by Perla Hamon

Active transposable elements recover species boundaries and geographic structure in Madagascan coffee species

scientific article published on August 2015

Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades ⬇️

scientific article published on March 20, 2012

Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae

scientific article published on 30 April 2020

Complex evolutionary history of coffees revealed by full plastid genomes and 28,800 nuclear SNP analyses, with particular emphasis on Coffea canephora (Robusta coffee)

scientific article published on 09 July 2020

Craterispermum capitatum and C. gabonicum (Rubiaceae): two new species from the Lower Guinean and Congolian Domains

scientific article

Current genetic differentiation of Coffea canephora Pierre ex A. Froehn in the Guineo-Congolian African zone: cumulative impact of ancient climatic changes and recent human activities

scientific article

Development of genomic microsatellite markers in Coffea canephora and their transferability to other coffee species

scientific article

Distribution of Divo in Coffea genomes, a poorly described family of angiosperm LTR-Retrotransposons.

scientific article published on 17 March 2017

Effects of quantitative and qualitative principal component score strategies on the structure of coffee, rubber tree, rice and sorghum core collections

scientific article published in 1998

Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

scientific article published on 12 June 2019

Evidence of weak genetic differentiation of Striga gesnerioides populations collected in Senegal: possible relationship with traditional cowpea seed management

scientific article published on 31 May 2009

Genetic structure and diversity of coffee (Coffea) across Africa and the Indian Ocean islands revealed using microsatellites

scientific article published on 28 December 2012

Genotyping-by-sequencing provides the first well-resolved phylogeny for coffee (Coffea) and insights into the evolution of caffeine content in its species: GBS coffee phylogeny and the evolution of caffeine content.

scientific article

Large distribution and high sequence identity of a Copia-type retrotransposon in angiosperm families

scientific article published on 6 August 2015

Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes

scientific article

Microsatellite markers for Amborella (Amborellaceae), a monotypic genus endemic to New Caledonia

scientific article published on 01 October 2012

MoccaDB - an integrative database for functional, comparative and diversity studies in the Rubiaceae family

scientific article

Partial sequencing reveals the transposable element composition of Coffea genomes and provides evidence for distinct evolutionary stories.

scientific article published on 28 July 2016

Phenotypic diversity assessment within a major ex situ collection of wild endemic coffees in Madagascar

scientific article published on 18 April 2020

SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus

scientific article published on 19 August 2006

Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species

scientific article

Site-Specific Insertion Polymorphism of the MITE Alex-1 in the Genus Coffea Suggests Interspecific Gene Flow

scientific article

Terminal-repeat retrotransposons with GAG domain in plant genomes: a new testimony on the complex world of transposable elements

scientific article

The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago

scientific article published on 14 April 2021

Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae).

scientific article published on 20 April 2011

WCSdb: a database of wild Coffea species

scientific article published on 01 November 2020

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