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List of works by Shabhonam Caim

Antibiotics induce sustained dysregulation of intestinal T cell immunity by perturbing macrophage homeostasis

scientific article

Bifidobacterium breve UCC2003 Exopolysaccharide Modulates the Early Life Microbiota by Acting as a Potential Dietary Substrate

scientific article published on 29 March 2020

Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis

scientific article published on 01 October 2019

Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants.

scientific article published on 2 November 2017

Phylogenomic analysis of gastroenteritis-associated Clostridium perfringens in England and Wales over a 7-year period indicates distribution of clonal toxigenic strains in multiple outbreaks and extensive involvement of enterotoxin-encoding (CPE) pl

scientific article published on 20 September 2019

Preterm Infant-Associated Clostridium tertium, Clostridium cadaveris, and Clostridium paraputrificum Strains: Genomic and Evolutionary Insights

scientific article published on October 2017

Probing Genomic Aspects of the Multi-Host Pathogen Clostridium perfringens Reveals Significant Pangenome Diversity, and a Diverse Array of Virulence Factors.

scientific article published on 12 December 2017

Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens

scientific article published on 16 December 2019

Streaming histogram sketching for rapid microbiome analytics

scientific article published on 16 March 2019

The early life microbiota protects neonatal mice from pathological small intestinal epithelial cell shedding

scientific article published on 06 April 2020

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