List of works - Ramya Raviram

4C-ker: A Method to Reproducibly Identify Genome-Wide Interactions Captured by 4C-Seq Experiments

scientific article

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination

scientific article published on 15 June 2016

Active and Inactive Enhancers Cooperate to Exert Localized and Long-Range Control of Gene Regulation.

scientific article published on 25 May 2016

Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

article

Breaking TADs: insights into hierarchical genome organization.

scientific article published on June 2015

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci.

scientific article

CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation

scientific article published on February 2015

Capturing the Onset of PRC2-Mediated Repressive Domain Formation

scientific article published on 01 June 2018

Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms

scientific article

Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions.

scientific article published on 20 July 2016

Interpreting 4C-Seq data: how far can we go?

scientific article

Long-Range Regulation of V(D)J Recombination

scientific article

Low-Grade Astrocytoma Mutations in IDH1, P53, and ATRX Cooperate to Block Differentiation of Human Neural Stem Cells via Repression of SOX2.

scientific article published in October 2017

MED12 Regulates HSC-Specific Enhancers Independently of Mediator Kinase Activity to Control Hematopoiesis

scientific article published on 24 August 2016

Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination

scientific article published on 22 February 2016

Stage-specific epigenetic regulation of CD4 expression by coordinated enhancer elements during T cell development

scientific article published in Nature Communications

List of works by Ramya Raviram

4C-ker: A Method to Reproducibly Identify Genome-Wide Interactions Captured by 4C-Seq Experiments

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination

Active and Inactive Enhancers Cooperate to Exert Localized and Long-Range Control of Gene Regulation.

Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

Breaking TADs: insights into hierarchical genome organization.

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci.

CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation

Capturing the Onset of PRC2-Mediated Repressive Domain Formation

Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms

Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions.

Interpreting 4C-Seq data: how far can we go?

Long-Range Regulation of V(D)J Recombination

Low-Grade Astrocytoma Mutations in IDH1, P53, and ATRX Cooperate to Block Differentiation of Human Neural Stem Cells via Repression of SOX2.

MED12 Regulates HSC-Specific Enhancers Independently of Mediator Kinase Activity to Control Hematopoiesis

Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination

Stage-specific epigenetic regulation of CD4 expression by coordinated enhancer elements during T cell development