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List of works by David Baulcombe

22-Nucleotide RNAs trigger secondary siRNA biogenesis in plants

scientific article

5' isomiR variation is of functional and evolutionary importance

scientific article

A PHABULOSA/cytokinin feedback loop controls root growth in Arabidopsis

scientific article

A Potato Virus X Resistance Gene Mediates an Induced, Nonspecific Resistance in Protoplasts

scientific article published in August 1993

A first global phylogeny ofMaize chlorotic mottle virus

scholarly article published 27 October 2017

A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs.

scientific article published on 9 March 2012

A novel wheat alpha-amylase gene (alpha-Amy3).

scientific article published on August 1987

A saponin-detoxifying enzyme mediates suppression of plant defences

scientific article published in August 2002

An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal

scientific article

An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis

scientific article published in 2007

An antiviral defense role of AGO2 in plants

scientific article

An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II.

scientific article

An atypical epigenetic mechanism affects uniparental expression of Pol IV-dependent siRNAs

scientific article

Analysis of Small RNA Populations Using Hybridization to DNA Tiling Arrays

Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA

scientific article

Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

scientific article

Artificial evolution extends the spectrum of viruses that are targeted by a disease-resistance gene from potato

scholarly article

Bacterial pathogens encode suppressors of RNA-mediated silencing

scientific article published on 17 October 2008

Cell-to-cell movement of potato potexvirus X is dependent on suppression of RNA silencing

scientific article

Cell-to-cell movement of potato virus X is associated with a change in the size-exclusion limit of plasmodesmata in trichome cells of Nicotiana clevelandii

scientific article

Cell-to-cell movement of the 25K protein of potato virus X is regulated by three other viral proteins

scientific article published in June 2000

Cloning and characterization of micro-RNAs from moss

scientific article published in September 2005

Comparative functional genomics of the fission yeasts

scientific article

Complementation of a potato virus X mutant mediated by bombardment of plant tissues with cloned viral movement protein genes.

scientific article published in August 1997

Concurrent suppression of virus replication and rescue of movement-defective virus in transgenic plants expressing the coat protein of potato virus X.

scientific article published in September 1997

Consistent gene silencing in transgenic plants expressing a replicating potato virus X RNA.

scientific article published on June 1997

Criteria for annotation of plant MicroRNAs

scientific article published on 12 December 2008

Crystal structure of p19 ? a universal suppressor of RNA silencing

scientific article published on 01 June 2004

DNA events. An RNA microcosm

scientific article

Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis

scholarly article

Distinct roles of Argonaute in the green alga Chlamydomonas reveal evolutionary conserved mode of miRNA-mediated gene expression

scientific article published on 31 July 2019

Elicitor-mediated oligomerization of the tobacco N disease resistance protein

scientific article published on 30 December 2005

Endogenous miRNA in the green alga Chlamydomonas regulates gene expression through CDS-targeting

scientific article

Environmental and epigenetic regulation of Rider retrotransposons in tomato

scientific article published on 16 September 2019

Epigenetic regulation in plant responses to the environment

scientific article

Epigenetic transitions leading to heritable, RNA-mediated de novo silencing in Arabidopsis thaliana

scientific article

Evidence for large complex networks of plant short silencing RNAs

scientific article

Evolution of NBS-LRR Gene Copies among Dicot Plants and its Regulation by Members of the miR482/2118 Superfamily of miRNAs

article

Extensive recombination challenges the utility of Sugarcane mosaic virus phylogeny and strain typing

scientific article published on 27 December 2019

Extraordinary transgressive phenotypes of hybrid tomato are influenced by epigenetics and small silencing RNAs.

scientific article published on 16 December 2011

FDF-PAGE: a powerful technique revealing previously undetected small RNAs sequestered by complementary transcripts

scientific article published on 13 June 2015

Fast forward genetics based on virus-induced gene silencing

scientific article

Frequent paramutation-like features of natural epialleles in tomato

article

Functionally Homologous Host Components Recognize Potato Virus X in Gomphrena globosa and Potato

scientific article published in August 1993

High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance.

scientific article

High-resolution genetic map of Nb, a gene that confers hypersensitive resistance to potato virus X in Solanum tuberosum

scientific article

Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii.

scientific article published on 19 January 2009

How Virus Resistance Provided a Mechanistic Foundation for RNA Silencing

scientific article published on 08 May 2019

Identification and characterization of small RNAs from the phloem of Brassica napus

scientific article

Identification of trans-acting siRNAs in moss and an RNA-dependent RNA polymerase required for their biogenesis

scientific article

Identifying small interfering RNA loci from high-throughput sequencing data

scientific article

Intercellular and systemic movement of RNA silencing signals

scientific article

Interspecific hybridization in tomato influences endogenous viral sRNAs and alters gene expression

scientific article published on 21 May 2022

Isolation and cloning of small RNAs from virus-infected plants

scientific article published in January 2006

JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis

scientific article

Maize chlorotic mottle virus exhibits low divergence between differentiated regional sub-populations

scientific article published on 19 January 2018

Maternal siRNAs as regulators of parental genome imbalance and gene expression in endosperm of Arabidopsis seeds

scientific article

Mechanisms of Pathogen-Derived Resistance to Viruses in Transgenic Plants

article

Metastable differentially methylated regions within Arabidopsis inbred populations are associated with modified expression of non-coding transcripts

scientific article

Mobile 24 nt small RNAs direct transcriptional gene silencing in the root meristems of Arabidopsis thaliana

scientific article

Mobile small RNAs regulate genome-wide DNA methylation

scientific article published on 19 January 2016

Modulation of floral development by a gibberellin-regulated microRNA

scientific article

Molecular biology. Amplified silencing

scientific article

Molecular biology. Unwinding RNA silencing

scientific article published in November 2000

Most microRNAs in the single-cell alga Chlamydomonas reinhardtii are produced by Dicer-like 3-mediated cleavage of introns and untranslated regions of coding RNAs.

scientific article published on 11 March 2016

Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins

scientific article published on December 2008

Mutation of the GKS motif of the RNA-dependent RNA polymerase from potato virus X disables or eliminates virus replication

scientific article published in June 1997

NRG1, a CC-NB-LRR protein, together with N, a TIR-NB-LRR protein, mediates resistance against tobacco mosaic virus

scientific article published in May 2005

New approaches for the analysis of Arabidopsis thaliana small RNAs.

scientific article

Novel strategies for engineering virus resistance in plants

article

Overview of RNA interference and related processes

scientific article published in May 2003

Physical association of the NB-LRR resistance protein Rx with a Ran GTPase-activating protein is required for extreme resistance to Potato virus X.

scientific article published on 25 May 2007

Polygalacturonase-inhibiting proteins (PGIPs) with different specificities are expressed in Phaseolus vulgaris

scientific article published in September 1997

Putative Arabidopsis THO/TREX mRNA export complex is involved in transgene and endogenous siRNA biosynthesis

scientific article (publication date: 3 August 2010)

RETRACTED: Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana

RETRACTED: scientific article

RNA polymerase IV directs silencing of endogenous DNA.

scientific article

RNA polymerase slippage as a mechanism for the production of frameshift gene products in plant viruses of the potyviridae family

scientific article published on 15 April 2015

RNA silencing

scientific article

RNA silencing in plants

scientific article

RNA silencing of hydrogenase(-like) genes and investigation of their physiological roles in the green alga Chlamydomonas reinhardtii.

scientific article published on November 2010

RNA silencing pathways in plants

scientific article

RNAi in Transgenic Plants

article

Reaping Benefits of Crop Research

scientific article published in Science

Relationship between genome and epigenome--challenges and requirements for future research

scientific article published on 18 June 2014

Resistance to rice yellow mottle virus (RYMV) in cultivated African rice varieties containing RYMV transgenes

scientific article published in July 1999

SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis

scientific journal article

SDE5, the putative homologue of a human mRNA export factor, is required for transgene silencing and accumulation of trans-acting endogenous siRNA.

scientific article published in April 2007

SLTAB2 is the paramutated SULFUREA locus in tomato.

scientific article published on 8 March 2016

Sequence analysis of a "true" chalcone synthase (chs_H1) oligofamily from hop (Humulus lupulus L.) and PAP1 activation of chs_H1 in heterologous systems

scientific article

Short silencing RNA: the dark matter of genetics?

scientific article published on January 2006

Signal for potyvirus-dependent aphid transmission of potato aucuba mosaic virus and the effect of its transfer to potato virus X.

scientific article published in July 1993

Silencing of a gene encoding a protein component of the oxygen-evolving complex of photosystem II enhances virus replication in plants

scientific article published in April 2002

Silencing signals in plants: a long journey for small RNAs

scientific article published on 11 January 2011

Small RNAs and heritable epigenetic variation in plants

scientific article published on 03 September 2013

Small RNAs hit the big time

scientific article published on 01 January 2007

Small RNA—the Secret of Noble Rot

scientific article

Small Silencing RNAs in Plants Are Mobile and Direct Epigenetic Modification in Recipient Cells

scientific article

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

scientific article

Standing up for GMOs

scientific article

Stepwise artificial evolution of a plant disease resistance gene

scientific article published on 09 December 2013

Strategies for virus resistance in plants

scientific article published on February 1989

Sub-cellular localization of the 25-kDa protein encoded in the triple gene block of potato virus X.

scientific article

Suppression of Virus Accumulation in Transgenic Plants Exhibiting Silencing of Nuclear Genes

scientific article published in February 1996

Systemic signalling in gene silencing

scientific article published in Nature

The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci

scientific article published on 19 February 2010

The P1N-PISPO trans-Frame Gene of Sweet Potato Feathery Mottle Potyvirus Is Produced during Virus Infection and Functions as an RNA Silencing Suppressor

scientific article published on 20 January 2016

The Polerovirus silencing suppressor P0 targets ARGONAUTE proteins for degradation.

scientific article published in September 2007

The amplicon-plus system for high-level expression of transgenes in plants

scientific article published in June 2002

The processing and intracellular transport of messenger RNA in a higher plant

doctoral thesis

The silencing suppressor P25 of Potato virus X interacts with Argonaute1 and mediates its degradation through the proteasome pathway.

scientific article published on September 2010

The specific binding to 21-nt double-stranded RNAs is crucial for the anti-silencing activity of Cucumber vein yellowing virus P1b and perturbs endogenous small RNA populations

scientific article published on 29 April 2011

The top 100 questions of importance to the future of global agriculture

article

The use of duplex-specific nuclease in ribosome profiling and a user-friendly software package for Ribo-seq data analysis

scientific article

Tobacco rattle virus 16-kilodalton protein encodes a suppressor of RNA silencing that allows transient viral entry in meristems.

scientific article

Towards annotating the plant epigenome: the Arabidopsis thaliana small RNA locus map.

scientific article

Transposon age and non-CG methylation

scientific article published on 06 March 2020

Two classes of short interfering RNA in RNA silencing

scientific article published on 19 August 2015

Ubiquitin ligase-associated protein SGT1 is required for host and nonhost disease resistance in plants

scientific article

Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis

scientific article published in Nature

Using a viral vector to reveal the role of microRNA159 in disease symptom induction by a severe strain of Cucumber mosaic virus

scientific article published on 3 February 2014

VIGS, HIGS and FIGS: small RNA silencing in the interactions of viruses or filamentous organisms with their plant hosts

scientific article published on 03 August 2015

Virus-induced gene silencing in Solanum species

scientific article

Welcome to silence

scientific article published on 12 January 2010

Widespread role for the flowering-time regulators FCA and FPA in RNA-mediated chromatin silencing

scientific article

miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii

scientific article

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