List of works - Jacek Puchalka

Absence of IFN-beta impairs antigen presentation capacity of splenic dendritic cells via down-regulation of heat shock protein 70.

scientific article published on July 2009

Author Correction: Human FCHO1 deficiency reveals role for clathrin-mediated endocytosis in development and function of T cells

scientific article published on 20 April 2020

Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks.

scientific article published on March 2004

Characterizing the optimal flux space of genome-scale metabolic reconstructions through modified latin-hypercube sampling

scientific article published on 28 January 2016

Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes.

scientific article published on 3 April 2017

Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling

scientific article published on January 2013

Ex vivo transcriptional profiling reveals a common set of genes important for the adaptation of Pseudomonas aeruginosa to chronically infected host sites.

scientific article published on 12 November 2012

From the environment to the host: re-wiring of the transcriptome of Pseudomonas aeruginosa from 22°C to 37°C.

scientific article

Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1

scientific article

Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology

scientific article

Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

scientific article

Human FCHO1 deficiency reveals role for clathrin-mediated endocytosis in development and function of T cells

scientific article published on 25 February 2020

Immunoglobulins drive terminal maturation of splenic dendritic cells.

scientific article published on 23 January 2013

In-vivo expression profiling of Pseudomonas aeruginosa infections reveals niche-specific and strain-independent transcriptional programs.

scientific article

Inherited biallelic CSF3R mutations in severe congenital neutropenia.

scientific article

JAGN1 deficiency causes aberrant myeloid cell homeostasis and congenital neutropenia

scientific article

Limited niche availability suppresses murine intrathymic dendritic-cell development from noncommitted progenitors

scientific article published on 19 November 2014

Loss-of-function mutations in the IL-21 receptor gene cause a primary immunodeficiency syndrome

scientific article published on 25 February 2013

Multicongenic fate mapping quantification of dynamics of thymus colonization.

scientific article

Myb-like, SWIRM, and MPN domains 1 (MYSM1) deficiency: Genotoxic stress-associated bone marrow failure and developmental aberrations.

scientific article published on 20 January 2017

Novel spontaneous deletion of artemis exons 10 and 11 in mice leads to T- and B-cell deficiency

scientific article

Protoanemonin: a natural quorum sensing inhibitor that selectively activates iron starvation response

scientific article published on 05 June 2012

Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis

scientific article

Reconciling in vivo and in silico key biological parameters of Pseudomonas putida KT2440 during growth on glucose under carbon-limited condition

scientific article

miR-181a/b-1 controls thymic selection of Treg cells and tunes their suppressive capacity

article

miR-191 modulates B-cell development and targets transcription factors E2A, Foxp1, and Egr1

scientific article published on 22 October 2018

List of works by Jacek Puchalka

Absence of IFN-beta impairs antigen presentation capacity of splenic dendritic cells via down-regulation of heat shock protein 70.

Author Correction: Human FCHO1 deficiency reveals role for clathrin-mediated endocytosis in development and function of T cells

Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks.

Characterizing the optimal flux space of genome-scale metabolic reconstructions through modified latin-hypercube sampling

Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes.

Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling

Ex vivo transcriptional profiling reveals a common set of genes important for the adaptation of Pseudomonas aeruginosa to chronically infected host sites.

From the environment to the host: re-wiring of the transcriptome of Pseudomonas aeruginosa from 22°C to 37°C.

Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1

Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology

Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

Human FCHO1 deficiency reveals role for clathrin-mediated endocytosis in development and function of T cells

Immunoglobulins drive terminal maturation of splenic dendritic cells.

In-vivo expression profiling of Pseudomonas aeruginosa infections reveals niche-specific and strain-independent transcriptional programs.

Inherited biallelic CSF3R mutations in severe congenital neutropenia.

JAGN1 deficiency causes aberrant myeloid cell homeostasis and congenital neutropenia

Limited niche availability suppresses murine intrathymic dendritic-cell development from noncommitted progenitors

Loss-of-function mutations in the IL-21 receptor gene cause a primary immunodeficiency syndrome

Multicongenic fate mapping quantification of dynamics of thymus colonization.

Myb-like, SWIRM, and MPN domains 1 (MYSM1) deficiency: Genotoxic stress-associated bone marrow failure and developmental aberrations.

Novel spontaneous deletion of artemis exons 10 and 11 in mice leads to T- and B-cell deficiency

Protoanemonin: a natural quorum sensing inhibitor that selectively activates iron starvation response

Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis

Reconciling in vivo and in silico key biological parameters of Pseudomonas putida KT2440 during growth on glucose under carbon-limited condition

miR-181a/b-1 controls thymic selection of Treg cells and tunes their suppressive capacity

miR-191 modulates B-cell development and targets transcription factors E2A, Foxp1, and Egr1