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List of works by Sean D. Hooper

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

scientific article

Annotation of metagenome short reads using proxygenes

scientific article published on August 2008

Environments shape the nucleotide composition of genomes

scientific article

Estimating DNA coverage and abundance in metagenomes using a gamma approximation

scientific article

Gene context analysis in the Integrated Microbial Genomes (IMG) data management system

scientific article

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

scientific article

Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii

scientific article

Genomic characterization of methanomicrobiales reveals three classes of methanogens

scientific article

Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis

scientific article (publication date: 16 January 2007)

Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach

scientific article published on 17 February 2009

Microbial co-habitation and lateral gene transfer: what transposases can tell us.

scientific article

Novel insights into the diversity of catabolic metabolism from ten haloarchaeal genomes

scientific article

Proteome survey reveals modularity of the yeast cell machinery

scientific article

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

scientific article

Systematic association of genes to phenotypes by genome and literature mining

scientific article

The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota

scientific article

The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader

scientific article

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