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List of works by Fanrong Kong

, a rare pathogen of human invasive infections, and literature review

scholarly article by Shu-Ying Yu et al published 2018 in Infection and Drug Resistance

16S-23S Internal Transcribed Spacer Region PCR and Sequencer-Based Capillary Gel Electrophoresis has Potential as an Alternative to High Performance Liquid Chromatography for Identification of Slowly Growing Nontuberculous Mycobacteria

scientific article (publication date: 2016)

A Comprehensive Evaluation of the Bruker Biotyper MS and Vitek MS Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Systems for Identification of Yeasts, Part of the National China Hospital Invasive Fungal Surveillance Net

scientific article

A first case of human herpesvirus-6B reactivation, confirmed by next-generation sequencing, in allopurinol-induced hypersensitivity syndrome in China

article

A loop-mediated isothermal amplification (LAMP) assay for Strongyloides stercoralis in stool that uses a visual detection method with SYTO-82 fluorescent dye.

scientific article published on 09 December 2013

A molecular-capsular-type prediction system for 90 Streptococcus pneumoniae serotypes using partial cpsA-cpsB sequencing and wzy- or wzx-specific PCR.

scientific article

A multicentre study of meticillin-resistant Staphylococcus aureus in acute bacterial skin and skin-structure infections in China: susceptibility to ceftaroline and molecular epidemiology.

scientific article published on 15 January 2015

A multiplex PCR-based reverse line blot hybridization (mPCR/RLB) assay for detection of bacterial respiratory pathogens in children with pneumonia

scientific article published on February 2008

A new multiplex PCR-based reverse line-blot hybridization (mPCR/RLB) assay for rapid staphylococcal cassette chromosome mec (SCCmec) typing

scientific article published on 15 June 2009

A rare fungal species, Quambalaria cyanescens, isolated from a patient after augmentation mammoplasty--environmental contaminant or pathogen?

scientific article

Accurate Identification of Common Pathogenic Nocardia Species: Evaluation of a Multilocus Sequence Analysis Platform and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

scientific article published on 25 January 2016

Accurate and practical identification of 20 Fusarium species by seven-locus sequence analysis and reverse line blot hybridization, and an in vitro antifungal susceptibility study

scientific article published on 9 March 2011

Agar dilution method for detection of inducible clindamycin resistance in Staphylococcus spp.

scientific article published on 17 October 2007

An Improved In-house MALDI-TOF MS Protocol for Direct Cost-Effective Identification of Pathogens from Blood Cultures

scientific article published on 28 September 2017

Antifungal susceptibilities of Candida glabrata species complex, Candida krusei, Candida parapsilosis species complex and Candida tropicalis causing invasive candidiasis in China: 3 year national surveillance

scientific article

Antimicrobial activity of omadacycline in vitro against bacteria isolated from 2014 to 2017 in China, a multi-center study

scientific article published on 16 November 2020

Antimicrobial susceptibility of Pseudomonas aeruginosa in China: a review of two multicentre surveillance programmes, and application of revised CLSI susceptibility breakpoints ⬇️

scientific article published on August 19, 2012

Assignment of Streptococcus agalactiae isolates to clonal complexes using a small set of single nucleotide polymorphisms

scientific article

Assignment of recA reference sequence types for enhanced identification of the Burkholderia cepacia complex

scientific article published 2012

Assignment of recA reference sequence types for enhanced identification of the Burkholderia cepacia complex

scientific article published on 01 June 2012

Assignment of reference 5'-end 16S rDNA sequences and species-specific sequence polymorphisms improves species identification of Nocardia.

scientific article published on 23 June 2009

Chaetomium atrobrunneum and Aspergillus fumigatus in multiple tracheal aspirates: Copathogens or symbiosis

scientific article

Clinical and Microbiological Characterization of Invasive Pulmonary Aspergillosis Caused by Aspergillus lentulus in China

scientific article published on 28 July 2020

Clinical characteristics of the first cases of invasive candidiasis in China due to pan-echinocandin-resistant Candida tropicalis and Candida glabrata isolates with delineation of their resistance mechanisms ⬇️

scientific article published on 23 January 2018

Commonly used molecular epidemiology markers of Streptococcus agalactiae do not appear to predict virulence.

scientific article

Comparative Genome and Transcriptome Study of the Gene Expression Difference Between Pathogenic and Environmental Strains of

article

Comparative study of bacteriological culture and real-time fluorescence quantitative PCR (RT-PCR) and multiplex PCR-based reverse line blot (mPCR/RLB) hybridization assay in the diagnosis of bacterial neonatal meningitis

scientific article

Comparison of a 3-set genotyping system with multilocus sequence typing for Streptococcus agalactiae (Group B Streptococcus).

scientific article

Comparison of single- and multilocus sequence typing and toxin gene profiling for characterization of methicillin-resistant Staphylococcus aureus.

scientific article published on 22 August 2007

Comparison of two capillary gel electrophoresis systems for Clostridium difficile ribotyping, using a panel of ribotype 027 isolates and whole-genome sequences as a reference standard

scientific article

Computational bacterial genome-wide analysis of phylogenetic profiles reveals potential virulence genes of Streptococcus agalactiae

scientific article

Correction for Chen et al., Rolling Circle Amplification for Direct Detection of rpoB Gene Mutations in Mycobacterium tuberculosis Isolates from Clinical Specimens

scientific article published on July 2016

Defining reference sequences for Nocardia species by similarity and clustering analyses of 16S rRNA gene sequence data

scientific article

Development of a DNA microarray to identify the Streptococcus pneumoniae serotypes contained in the 23-valent pneumococcal polysaccharide vaccine and closely related serotypes.

scientific article

Development of fluconazole resistance in a series of Candida parapsilosis isolates from a persistent candidemia patient with prolonged antifungal therapy

scientific article published on 18 August 2015

Differences in in vitro interactions between macrophages with pathogenic and environmental strains of Prototheca

scientific article published on 06 April 2020

Distribution and Antifungal Susceptibility of Candida Species Causing Candidemia in China: An Update From the CHIF-NET Study

scientific article published on 01 March 2020

Distribution of serotypes, genotypes, and resistance determinants among macrolide-resistant Streptococcus pneumoniae isolates

scientific article published on 11 January 2010

Diverse Genetic Background of Multidrug-Resistant Pseudomonas aeruginosa from Mainland China, and Emergence of an Extensively Drug-Resistant ST292 Clone in Kunming

scientific article

Diversity of Group B Streptococcus Serotypes Causing Urinary Tract Infection in Adults.

scientific article published in August 2013

Diversity of group B streptococcus serotypes causing urinary tract infection in adults

scientific article published on 13 May 2009

Escherichia coli Sequence Type 131 as a Prominent Cause of Antibiotic Resistance among Urinary Escherichia coli Isolates from Reproductive-Age Women ⬇️

scientific article published on July 24, 2013

Evaluation of a multiplex PCR-based reverse line blot-hybridization assay for identification of serotype and surface protein antigens of Streptococcus agalactiae

scientific article published on October 2006

Extended phage locus typing of Salmonella enterica serovar Typhimurium, using multiplex PCR-based reverse line blot hybridization

scientific article published in July 2008

First case report of endocarditis caused by haematobacter massiliensis in China

scientific article published on 31 October 2017

First report of putative Streptococcus pneumoniae serotype 6D among nasopharyngeal isolates from Fijian children

scientific article published in November 2009

Five-Year National Surveillance of Invasive Candidiasis: Species Distribution and Azole Susceptibility from the China Hospital Invasive Fungal Surveillance Net (CHIF-NET) Study

scientific article published on 25 June 2018

Five-year China Hospital Invasive Fungal Surveillance Net (CHIF-NET) study of invasive fungal infections caused by noncandidal yeasts: species distribution and azole susceptibility

article

Genome-wide analysis of Streptococcus pneumoniae serogroup 19 in the decade after the introduction of pneumococcal conjugate vaccines in Australia

scientific article published in Scientific Reports

Genotypic Diversity of Staphylococcus aureus α-Hemolysin Gene (hla) and Its Association with Clonal Background: Implications for Vaccine Development

scientific article published on 11 February 2016

Genotypic and phenotypic characterization of Escherichia coli isolates from children with urinary tract infection and from healthy carriers.

scientific article published in May 2013

Genotypic differences in CC224, CC363, CC449 and CC446 of Moraxella catarrhalis isolates based on whole genome SNP, MLST and PFGE typing

scientific article published on 19 September 2019

Genotyping of human adenoviruses using a PCR-based reverse line blot hybridisation assay ⬇️

scientific article published on 01 August 2011

High ceftaroline non-susceptibility in Staphylococcus aureus isolated from acute skin infections in 15 tertiary hospitals in China ⬇️

scientific article published on November 22, 2012

High in vitro activity of fidaxomicin against Clostridium difficile isolates from a university teaching hospital in China

scientific article published on 29 June 2017

High-Level Macrolide-Resistant Moraxella catarrhalis and Development of an Allele-Specific PCR Assay for Detection of 23S rRNA Gene A2330T Mutation: A Three-Year Study at a Chinese Tertiary Hospital

scientific article published on 29 April 2015

Hyperbranched rolling circle amplification as a rapid and sensitive method for species identification within the Cryptococcus species complex.

scientific article

Identification and Antifungal Susceptibility Profile of Candida guilliermondii and Candida fermentati from a Multicenter Study in China

scientific article published on June 2016

Identification and Antifungal Susceptibility Profiles of Candida haemulonii Species Complex Clinical Isolates from a Multicenter Study in China

scientific article

Identification and Antifungal Susceptibility Profiles of Candida nivariensis and Candida bracarensis in a Multi-Center Chinese Collection of Yeasts

scientific article

Identification of 20 common human enterovirus serotypes by use of a reverse transcription-PCR-based reverse line blot hybridization assay

scientific article published on July 2009

Identification of Candida glabrata complex species: use of Vitek MS® RUO & Bruker ClinproTools®

scientific article published on 10 May 2018

Identification of a Streptococcus agalactiae serotype III subtype 4 clone in association with adult invasive disease in Hong Kong

scientific article

Identification of less-common Streptococcus pneumoniae serotypes by a multiplex PCR-based reverse line blot hybridization assay

scientific article

Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rRNA and 16S-23S rRNA gene spacer regions.

scientific article published on 2 December 2009

Identification of surface proteins of group B streptococci: serotyping versus genotyping

scientific article published on 30 June 2009

Improved identification of Gordonia, Rhodococcus and Tsukamurella species by 5'-end 16S rRNA gene sequencing

scientific article published in January 2011

Improved identification of rapidly growing mycobacteria by a 16S-23S internal transcribed spacer region PCR and capillary gel electrophoresis.

scientific article

In VitroSusceptibilities of Yeast Species to Fluconazole and Voriconazole as Determined by the 2010 National China Hospital Invasive Fungal Surveillance Net (CHIF-NET) Study ⬇️

scientific article published on October 3, 2012

In vitro activities of miltefosine and two novel antifungal biscationic salts against a panel of 77 dermatophytes

scientific article published on 19 March 2007

Influence of disk separation distance on accuracy of the disk approximation test for detection of inducible clindamycin resistance in Staphylococcus spp.

scientific article

Integron gene cassettes in Acinetobacter spp. strains from South China

scientific article published on 30 August 2008

International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database--the quality controlled standard tool for routine identification of human and animal pathogenic fungi

scientific article published on 22 March 2015

Investigation of an unrecognized large-scale outbreak of Candida parapsilosis sensu stricto fungaemia in a tertiary-care hospital in China

scientific article published on 02 June 2016

Linear normalised hash function for clustering gene sequences and identifying reference sequences from multiple sequence alignments

scientific article

Misidentification of a Rare Species, Cryptococcus laurentii, by Commonly Used Commercial Biochemical Methods and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Systems: Challenges for Clinical Mycology Laboratories

scientific article published on 11 November 2015

Molecular Characterization of Candida parapsilosis by Microsatellite Typing and Emergence of Clonal Antifungal Drug Resistant Strains in a Multicenter Surveillance in China

scientific article published on 16 June 2020

Molecular Characterization of Streptococcus agalactiae Isolates From Pregnant and Non-Pregnant Women at Yazd University Hospital, Iran

scientific article published on 15 February 2016

Molecular Epidemiology and Antifungal Susceptibility of Candida glabrata in China (August 2009 to July 2014): A Multi-Center Study

scientific article

Molecular Epidemiology and Antimicrobial Susceptibility of Clostridium difficile Isolates from a University Teaching Hospital in China

scientific article published on 17 October 2016

Molecular characterization of enterovirus 71 and coxsackievirus A16 using the 5' untranslated region and VP1 region

scientific article published on 9 December 2010

Molecular epidemiology and azole resistance mechanism study of Candida guilliermondii from a Chinese surveillance system

scientific article

Molecular identification and analysis of nonserotypeable human enteroviruses

scientific article

Molecular profiles of group B streptococcal surface protein antigen genes: relationship to molecular serotypes

scientific article

Molecular serotype identification of Streptococcus agalactiae of bovine origin by multiplex PCR-based reverse line blot (mPCR/RLB) hybridization assay.

scientific article

Moraxella catarrhalis Macrolide-Resistant Isolates Are Highly Concentrated in Two MLST Clonal Complexes -CCN10 and CC363.

scientific article published on 10 February 2017

Multilocus sequence typing indicates diverse origins of invasive Candida tropicalis isolates in China.

scientific article published on January 2014

Multiplex PCR and reverse line blot hybridization assay (mPCR/RLB).

scientific article published on 6 August 2011

Multiplex PCR targeting slpA: a rapid screening method to predict common Clostridium difficile ribotypes among fluoroquinolone resistant clinical strains

scientific article published on October 2013

Multiplex PCR-based reverse line blot assay for simultaneous detection of 22 virulence genes in uropathogenic Escherichia coli

scientific article published on 9 December 2011

Multiplex PCR-based reverse line blot hybridization assay (mPCR/RLB)--a practical epidemiological and diagnostic tool

scientific article published on 01 January 2006

Multiplex PCR-based reverse line blot hybridization assay to identify 23 Streptococcus pneumoniae polysaccharide vaccine serotypes

scientific article

National antimicrobial stewardship and fluoroquinolone-resistant Clostridium difficile in China

scientific article published on 13 October 2017

National surveillance of methicillin-resistant Staphylococcus aureus in China highlights a still-evolving epidemiology with 15 novel emerging multilocus sequence types.

scientific article published on 28 August 2013

Notable Increasing Trend in Azole Non-susceptible Candida tropicalis Causing Invasive Candidiasis in China (August 2009 to July 2014): Molecular Epidemiology and Clinical Azole Consumption

scientific article published on 22 March 2017

Novel Polymorphic Multilocus Microsatellite Markers to Distinguish Candida tropicalis Isolates

scientific article

Postgenomic taxonomy of human ureaplasmas -- a case study based on multiple gene sequences.

scientific article

Practical Prediction of Ten Common Streptococcus pneumoniae Serotypes/Serogroups in One PCR Reaction by Multiplex Ligation-Dependent Probe Amplification and Melting Curve (MLPA-MC) Assay in Shenzhen, China

scientific article published on 7 July 2015

Practical identification of eight medically important Trichosporon species by reverse line blot hybridization (RLB) assay and rolling circle amplification (RCA).

scientific article

Practical method for detection and identification of Candida, Aspergillus, and Scedosporium spp. by use of rolling-circle amplification

scientific article

Rapid Detection of Isoniazid, Rifampin, and Ofloxacin Resistance in Mycobacterium tuberculosis Clinical Isolates Using High-Resolution Melting Analysis ⬇️

scientific article published on August 10, 2011

Rapid detection of ERG11 gene mutations in clinical Candida albicans isolates with reduced susceptibility to fluconazole by rolling circle amplification and DNA sequencing

scientific article

Rapid identification and differentiation of Trichophyton species, based on sequence polymorphisms of the ribosomal internal transcribed spacer regions, by rolling-circle amplification

scientific article published on 30 January 2008

Rapid identification of methicillin-resistant Staphylococcus aureus transmission in hospitals by use of phage-derived open reading frame typing enhanced by multiplex PCR and reverse line blot assay

scientific article

Reverse line blot assay for direct identification of seven Streptococcus agalactiae major surface protein antigen genes

scientific article

Reverse line blot hybridization and DNA sequencing studies of the 16S-23S rRNA gene intergenic spacer regions of five emerging pathogenic Nocardia species.

scientific article published on 28 January 2010

Reverse line blot hybridization assay for identification of medically important fungi from culture and clinical specimens

scientific article

Rolling circle amplification and multiplex allele-specific PCR for rapid detection of katG and inhA gene mutations in Mycobacterium tuberculosis.

scientific article published on 14 July 2009

Rolling circle amplification for direct detection of rpoB gene mutations in Mycobacterium tuberculosis isolates from clinical specimens

scientific article published on 26 February 2014

Sequencer-Based Capillary Gel Electrophoresis (SCGE) Targeting the rDNA Internal Transcribed Spacer (ITS) Regions for Accurate Identification of Clinically Important Yeast Species

scientific article

Serotype IX, a Proposed New Streptococcus agalactiae Serotype

scientific article (publication date: 18 July 2007)

Serotype Identification of Group B Streptococci by PCR and Sequencing ⬇️

scientific article published on January 1, 2002

Simple, accurate, serotype-specific PCR assay to differentiate Streptococcus pneumoniae serotypes 6A, 6B, and 6C.

scientific article published on 17 June 2009

Simultaneous Direct Identification of Genital Microorganisms in Voided Urine Using Multiplex PCR-Based Reverse Line Blot Assays ⬇️

scientific article published on January 1, 2013

Simultaneous detection and identification of Candida, Aspergillus, and Cryptococcus species by reverse line blot hybridization

scientific article

Simultaneous detection and identification of common cell culture contaminant and pathogenic mollicutes strains by reverse line blot hybridization

scientific article published on March 2004

Simultaneous detection and serotype identification of Streptococcus agalactiae using multiplex PCR and reverse line blot hybridization

scientific article published on 01 December 2005

Simultaneous detection of nine antibiotic resistance-related genes in Streptococcus agalactiae using multiplex PCR and reverse line blot hybridization assay

scientific article

Simultaneous identification of 14 genital microorganisms in urine by use of a multiplex PCR-based reverse line blot assay

scientific article published on 08 April 2009

Streptococcus agalactiae Cbeta protein gene (bac) sequence types, based on the repeated region of the cell-wall-spanning domain: relationship to virulence and a proposed standardized nomenclature

scientific article published in July 2006

The First Two Clostridium difficile Ribotype 027/ST1 Isolates Identified in Beijing, China-an Emerging Problem or a Neglected Threat?

scientific article

The Role of Glutamate Dehydrogenase (GDH) Testing Assay in the Diagnosis of Clostridium difficile Infections: A High Sensitive Screening Test and an Essential Step in the Proposed Laboratory Diagnosis Workflow for Developing Countries like China

scientific article published on 11 December 2015

The prevalence of urogenital micro-organisms detected by a multiplex PCR–reverse line blot assay in women attending three sexual health clinics in Sydney, Australia ⬇️

scientific article published on March 17, 2011

The widely used ATB FUNGUS 3 automated readings in China and its misleading high MICs of Candida spp. to azoles: challenges for developing countries' clinical microbiology labs

scientific article

Three clustered cases of candidemia caused by Candida quercitrusa and mycological characteristics of this novel species

scientific article

Three new macrolide efflux (mef) gene variants in Streptococcus agalactiae

scientific article published on 27 June 2007

Three-locus identification, genotyping, and antifungal susceptibilities of medically important Trichosporon species from China

scientific article published on 7 September 2011

Towards a genotyping system for Streptococcus agalactiae (group B streptococcus): use of mobile genetic elements in Australasian invasive isolates

scientific article published on April 2003

Unexpected diversity of staphylococcal cassette chromosome mec type IV in methicillin-resistant Staphylococcus aureus strains.

scientific article published on 4 August 2010

Use of PCR and reverse line blot hybridization assay for rapid simultaneous detection and serovar identification of Chlamydia trachomatis

scientific article

Use of PCR and reverse line blot hybridization macroarray based on 16S-23S rRNA gene internal transcribed spacer sequences for rapid identification of 34 mycobacterium species

scientific article

Use of a serotype-specific DNA microarray for identification of group B Streptococcus (Streptococcus agalactiae)

scientific article

Use of matrix-assisted laser desorption ionization-time of flight mass spectrometry to identify MLST clade 4 Clostridium difficile isolates

scientific article published on 26 April 2018

Use of next generation sequence to investigate potential novel macrolide resistance mechanisms in a population of Moraxella catarrhalis isolates

scientific article published on 24 October 2016

Use of phenotypic and molecular serotype identification methods to characterize previously nonserotypeable group B streptococci

scientific article published on 18 June 2008

Using Matrix-Assisted Laser Desorption Ionization-Time of Flight (MALDI-TOF) Complemented with Selected 16S rRNA and gyrB Genes Sequencing to Practically Identify Clinical Important Viridans Group Streptococci (VGS).

scientific article

Using a practical molecular capsular serotype prediction strategy to investigate Streptococcus pneumoniae serotype distribution and antimicrobial resistance in Chinese local hospitalized children

scientific article

Using cpsA–cpsB sequence polymorphisms and serotype-/group-specific PCR to predict 51 Streptococcus pneumoniae capsular serotypes ⬇️

scientific article published on December 1, 2003

Yeast identification algorithm based on use of the Vitek MS system selectively supplemented with ribosomal DNA sequencing: proposal of a reference assay for invasive fungal surveillance programs in China

scientific article published on 11 December 2013

Yeast identification by sequencing, biochemical kits, MALDI-TOF MS and rep-PCR DNA fingerprinting.

scientific article published on 8 December 2017

isolates causing refractory or recurrent oropharyngeal candidiasis in 11 hospitals in China

article

secA1 gene sequence polymorphisms for species identification of Nocardia species and recognition of intraspecies genetic diversity.

scientific article published on September 2010

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