List of works - Melissa M Matzke

A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.

scientific article

A comprehensive collection of systems biology data characterizing the host response to viral infection.

scientific article

A network integration approach to predict conserved regulators related to pathogenicity of influenza and SARS-CoV respiratory viruses

scientific article

A semiautomated framework for integrating expert knowledge into disease marker identification

scientific article published on 10 October 2013

A statistical selection strategy for normalization procedures in LC-MS proteomics experiments through dataset-dependent ranking of normalization scaling factors.

scientific article

Bayesian proteoform modeling improves protein quantification of global proteomic measurements.

scientific article

Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data

scientific article

Improved quality control processing of peptide-centric LC-MS proteomics data

scientific article

MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

scientific article published on 10 May 2016

Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury

scientific article published on 06 August 2013

Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses.

scientific article

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

scientific article published on 15 May 2015

Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells

scientific article published on 30 January 2013

Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics

scientific article published on 22 April 2015

Sequential projection pursuit principal component analysis--dealing with missing data associated with new -omics technologies

scientific article

Systems virology identifies a mitochondrial fatty acid oxidation enzyme, dodecenoyl coenzyme A delta isomerase, required for hepatitis C virus replication and likely pathogenesis

scientific article

List of works by Melissa M Matzke

A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.

A comprehensive collection of systems biology data characterizing the host response to viral infection.

A network integration approach to predict conserved regulators related to pathogenicity of influenza and SARS-CoV respiratory viruses

A semiautomated framework for integrating expert knowledge into disease marker identification

A statistical selection strategy for normalization procedures in LC-MS proteomics experiments through dataset-dependent ranking of normalization scaling factors.

Bayesian proteoform modeling improves protein quantification of global proteomic measurements.

Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data

Improved quality control processing of peptide-centric LC-MS proteomics data

MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury

Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses.

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells

Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics

Sequential projection pursuit principal component analysis--dealing with missing data associated with new -omics technologies

Systems virology identifies a mitochondrial fatty acid oxidation enzyme, dodecenoyl coenzyme A delta isomerase, required for hepatitis C virus replication and likely pathogenesis