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List of works by Craig D Wenger

A Proteomics Search Algorithm Specifically Designed for High-Resolution Tandem Mass Spectra ⬇️

scientific article published on January 31, 2013

A dynamic model of proteome changes reveals new roles for transcript alteration in yeast ⬇️

scientific article published on July 19, 2011

Amine-reactive neutron-encoded labels for highly plexed proteomic quantitation

scientific article published on 23 July 2013

Analysis of tandem mass spectra by FTMS for improved large-scale proteomics with superior protein quantification

scientific article

Bedtoolsr: An R package for genomic data analysis and manipulation

scientific article published on 06 December 2019

COMPASS: a suite of pre- and post-search proteomics software tools for OMSSA

scientific article

Characterization and diagnostic value of amino acid side chain neutral losses following electron-transfer dissociation.

scientific article

Characterization of proteomic and metabolomic responses to dietary factors and supplements

scientific article published on December 2007

Characterizing Peptide Neutral Losses Induced by Negative Electron-Transfer Dissociation (NETD) ⬇️

scientific article published on April 1, 2012

Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging

scientific article

Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search

scientific article

Global Post-Translational Modification Discovery

scientific article

Global amine and acid functional group modification of proteins

scientific article published on 10 January 2008

Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry

scholarly article

Instant spectral assignment for advanced decision tree-driven mass spectrometry

scientific article

Intellinsity: a tool for visualization and analysis of liquid chromatography/tandem mass spectrometry sampling events

scientific article published in November 2010

Large-scale phosphoprotein analysis in Medicago truncatula roots provides insight into in vivo kinase activity in legumes

scientific article

Phosphoproteomics for the masses

scientific article

Post-acquisition ETD spectral processing for increased peptide identifications

scientific article published on 14 March 2009

Proteomic and phosphoproteomic comparison of human ES and iPS cells

scientific article

Quantum criticality at the infinite complete basis set limit: A thermodynamic analog of the Yang and Lee theorem

RNA-protein analysis using a conditional CRISPR nuclease

scientific article published on 14 March 2013

Sub-part-per-million precursor and product mass accuracy for high-throughput proteomics on an electron transfer dissociation-enabled orbitrap mass spectrometer

scientific article

Tandem mass spectrometry with ultrahigh mass accuracy clarifies peptide identification by database retrieval

scientific article published on January 2009

The effect of interfering ions on search algorithm performance for electron-transfer dissociation data

scientific article

Top-down proteomics on a chromatographic time scale using linear ion trap fourier transform hybrid mass spectrometers

scientific article

Top-down proteomics reveals novel protein forms expressed in Methanosarcina acetivorans

scientific article

Value of using multiple proteases for large-scale mass spectrometry-based proteomics

scientific article

Versatile online-offline engine for automated acquisition of high-resolution tandem mass spectra

scientific article published on 08 October 2008

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