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List of works by Shuichi Asakawa

A Preliminary Metagenome Analysis Based on a Combination of Protein Domains

scientific article published on 29 April 2019

A Zebrafish Acromegaly Model Elevates DNA Damage and Impairs DNA Repair Pathways

scientific article published on 17 October 2018

A cluster of 21 keratin-associated protein genes within introns of another gene on human chromosome 21q22.3.

scientific article published on April 2004

A novel giant gene CSMD3 encoding a protein with CUB and sushi multiple domains: a candidate gene for benign adult familial myoclonic epilepsy on human chromosome 8q23.3-q24.1.

scientific article published on September 2003

A novel mouse model for Down syndrome that harbor a single copy of human artificial chromosome (HAC) carrying a limited number of genes from human chromosome 21.

scientific article published on 30 November 2013

A novel third gonadotropin-releasing hormone receptor in the medaka Oryzias latipes: evolutionary and functional implications ⬇️

scientific article published on September 18, 2003

An Acromegaly Disease Zebrafish Model Reveals Decline in Body Stem Cell Number along with Signs of Premature Aging

scientific article published on 07 June 2020

Analysis of eighteen deletion breakpoints in the parkin gene.

scientific article

Artificially designed hybrids facilitate efficient generation of high-resolution linkage maps

scientific article published in Scientific Reports

Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle.

scientific article published on 18 February 2016

Changes in free amino acid concentrations and associated gene expression profiles in the abdominal muscle of kuruma shrimp Marsupenaeus japonicus acclimated at different salinities.

scientific article published on 19 April 2018

Characterization of Pax3 and Pax7 genes and their expression patterns during different development and growth stages of Japanese pufferfish Takifugu rubripes.

scientific article published on 18 August 2015

Characterization of the torafugu (Takifugu rubripes) immunoglobulin heavy chain gene locus

scientific article published on 22 January 2015

Comparison of Two Pearl Sacs Formed in the Same Recipient Oyster with Different Genetic Background Involved in Yellow Pigmentation in Pinctada fucata

scientific article published on 30 May 2018

Conserved function of medaka pink-eyed dilution in melanin synthesis and its divergent transcriptional regulation in gonads among vertebrates

scientific article

Construction of BAC libraries derived from the ascidian Ciona intestinalis

scientific article

Construction of BAC library for the amphibian Xenopus tropicalis

scientific article

DMY is a Y-specific DM-domain gene required for male development in the medaka fish

scientific article

Deep sequencing, profiling and detailed annotation of microRNAs in Takifugu rubripes.

scientific article published on 16 June 2015

Different gene expression profiles between normal and thermally selected strains of rainbow trout, Oncorhynchus mykiss, as revealed by comprehensive transcriptome analysis

scientific article published on 14 October 2015

Discovery and Functional Understanding of MiRNAs in Mollusks: A Genome-wide Profiling Approach

scientific article published on 23 December 2020

Distinct genomic sequence of the CNR/Pcdhalpha genes in chicken

scientific article published in April 2004

Draft Genome Sequence of Aeromonas hydrophila Strain Ae34, Isolated from a Septicemic and Moribund Koi Carp (Cyprinus carpio koi), a Freshwater Aquarium Fish

scientific article published on 12 June 2014

Draft Genome Sequence of Thermoanaerobacterium saccharolyticum Strain NTOU1, a Thermophilic Bacterium Isolated from Marine Shallow Hydrothermal Vents

scientific article

Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology ⬇️

scientific article (publication date: April 2012)

Dramatic improvement in genome assembly achieved using doubled-haploid genomes

scientific article

Establishment and characterization of pleomorphic adenoma cell systems: an in-vitro demonstration of carcinomas arising secondarily from adenomas in the salivary gland

scientific article

Estimation of tuna population by the improved analytical pipeline of unique molecular identifier-assisted HaCeD-Seq (haplotype count from eDNA)

scientific article published on 12 April 2021

Evolution and Distribution of Teleost myomiRNAs: Functionally Diversified myomiRs in Teleosts

scientific article

Evolution of the myosin heavy chain gene MYH14 and its intronic microRNA miR-499: muscle-specific miR-499 expression persists in the absence of the ancestral host gene

scientific article

Exosome-derived small non-coding RNAs reveal immune response upon grafting transplantation in <i>Pinctada fucata</i> (Mollusca)

scientific article published on 04 May 2022

FAK-mediated extracellular signals are essential for interkinetic nuclear migration and planar divisions in the neuroepithelium.

scientific article

Fast skeletal muscle myosin heavy chain gene cluster of medaka Oryzias latipes enrolled in temperature adaptation

scientific article

Fine-scale population structure and ecotypes of anadromous Hilsa shad (Tenualosa ilisha) across complex aquatic ecosystems revealed by NextRAD genotyping

scientific article published on 05 November 2019

Gene expression profiles at different stages for formation of pearl sac and pearl in the pearl oyster Pinctada fucata

article

Genomic Structure and Expression of the Soluble Guanylyl Cyclase α2Subunit Gene in the Medaka Fish Oryzias latipes ⬇️

scientific article published on October 1, 2003

Genomic organization and transcripts of the zebrafish Protocadherin genes.

scientific article

Genomic sequences encoding two types of medaka hemopexin-like protein Wap65, and their gene expression profiles in embryos

scientific article

Global gene expression analysis of the muscle tissues of medaka acclimated to low and high environmental temperatures

scientific article published on 02 August 2017

High-Throughput Sequencing of the Expressed Torafugu (Takifugu rubripes) Antibody Sequences Distinguishes IgM and IgT Repertoires and Reveals Evidence of Convergent Evolution.

scientific article published on 21 February 2018

Identification and Characterization of microRNAs and Their Predicted Functions in Biomineralization in the Pearl Oyster (Pinctada fucata)

scientific article published on 17 June 2019

Identification of Loss of p16 Expression and Upregulation of MDR-1 as Genetic Events Resulting from Two Novel Chromosomal Translocations Found in a Plasmablastic Lymphoma of the Uterus ⬇️

scientific article published on February 15, 2011

Immunoglobulin light chain (IGL) genes in torafugu: Genomic organization and identification of a third teleost IGL isotype

scientific article published on 18 January 2017

Initial characterization of an uromodulin-like 1 gene on human chromosome 21q22.3.

scientific article published on July 2004

Molecular cloning and characterization of gene for Golgi-localized syntaphilin-related protein on human chromosome 8q23.

scientific article

Molecular genetic analysis of a novelParkin gene in Japanese families with autosomal recessive juvenile parkinsonism: Evidence for variable homozygous deletions in theParkin gene in affected individuals

article

Multiple cis-elements in the 5'-flanking region of embryonic/larval fast-type of the myosin heavy chain gene of torafugu, MYH(M743-2), function in the transcriptional regulation of its expression

scientific article published on August 26, 2011

Multiple transcription factors mediating the expressional regulation of myosin heavy chain gene involved in the indeterminate muscle growth of fish

scientific article published on 16 November 2018

Myocyte enhancer factor 2 regulates expression of medaka Oryzias latipes fast skeletal myosin heavy chain genes in a temperature-dependent manner

scientific article published on 03 October 2007

Novel Isoforms of N16 and N19 Families Implicated for the Nacreous Layer Formation in the Pearl Oyster Pinctada fucata

scientific article published on 16 January 2018

Novel PINK1 mutations in early-onset parkinsonism

scientific article

Novel genes participating in the formation of prismatic and nacreous layers in the pearl oyster as revealed by their tissue distribution and RNA interference knockdown

scientific article published on 15 January 2014

Nucleotide sequence of the MHC class I genomic region of a teleost, the medaka (Oryzias latipes)

scientific article (publication date: February 2002)

Organization and structure of hox gene loci in medaka genome and comparison with those of pufferfish and zebrafish genomes

scientific article

Parkin interacts with LIM Kinase 1 and reduces its cofilin-phosphorylation activity via ubiquitination

scientific article

Piwi-interacting RNA (piRNA) expression patterns in pearl oyster (Pinctada fucata) somatic tissues

scientific article published in Scientific Reports

Point Mutations (Thr240Arg and Ala311Stop) in theParkinGene

article

Population Genomics of an Anadromous Hilsa Shad Tenualosa ilisha Species across Its Diverse Migratory Habitats: Discrimination by Fine-Scale Local Adaptation

scientific article published on 30 December 2019

Promoter analysis of the fish gene of slow/cardiac-type myosin heavy chain implicated in specification of muscle fiber types

scientific article published on 18 January 2018

Radiation hybrid maps of Medaka chromosomes LG 12, 17, and 22.

scientific article

Regulation of gene expression mediating indeterminate muscle growth in teleosts.

scientific article

Role of TBX1 in human del22q11.2 syndrome ⬇️

scientific article published on October 25, 2003

Sequence analysis of filaggrin gene by novel shotgun method in Japanese atopic dermatitis.

scientific article

Skim-Sequencing Based Genotyping Reveals Genetic Divergence of the Wild and Domesticated Population of Black Tiger Shrimp (Penaeus monodon) in the Indo-Pacific Region

scientific article published on 07 September 2020

Stimulatory and inhibitory mechanisms of slow muscle-specific myosin heavy chain gene expression in fish: transient and transgenic analysis of torafugu MYH(M86-2) promoter in zebrafish embryos.

scientific article published on 10 December 2012

Structural characterization of GnRH loci in the medaka genome

scientific article

The diversity of shell matrix proteins: genome-wide investigation of the pearl oyster, Pinctada fucata

scientific article published on October 2013

The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes).

scientific article

The human ribosomal protein genes: sequencing and comparative analysis of 73 genes

scientific article

Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress

scientific article published on 29 March 2019

Two patients with atypical interstitial deletions of 8p23.1: mapping of phenotypical traits

scientific article published in May 2008

UTGB/medaka: genomic resource database for medaka biology

scientific article

Ultrahigh-Density Linkage Map Construction Using Low-Coverage Whole-Genome Sequencing of a Doubled Haploid Population: Case Study of Torafugu (Takifugu rubripes).

scientific article published on 26 February 2018

Whole-Genome Sequencing of 84 Japanese Eels Reveals Evidence against Panmixia and Support for Sympatric Speciation

scientific article published on 28 September 2018

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