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List of works by Samuel A. Cushman

A comparative framework to infer landscape effects on population genetic structure: are habitat suitability models effective in explaining gene flow?

article

A comparison of regression methods for model selection in individual-based landscape genetic analysis.

scientific article

A multi-scale analysis of species-environment relationships: breeding birds in a pitch pine–scrub oak (Pinus rigida–Quercus ilicifolia) community

article

A resistant-kernel model of connectivity for amphibians that breed in vernal pools

scientific article published on 01 June 2007

Adaptive evolution in a conifer hybrid zone is driven by a mosaic of recently introgressed and background genetic variants

scientific article published on 05 February 2021

Adaptive trait syndromes along multiple economic spectra define cold and warm adapted ecotypes in a widely distributed foundation tree species

scholarly article

An Axiom SNP genotyping array for Douglas-fir

scientific article published on 03 January 2020

Applications of landscape genetics in conservation biology: concepts and challenges

article

Assessing the complex relationship between landscape, gene flow, and range expansion of a Mediterranean carnivore

scientific article published in 2019

Bridging the research-management gap: landscape science in practice on public lands in the western United States

scientific article published on 11 February 2020

Calculation of Configurational Entropy in Complex Landscapes

scientific article published on 19 April 2018

Climate Change and Future Wildfire in the Western United States: An Ecological Approach to Nonstationarity

scholarly article by Jeremy S. Littell et al published August 2018 in Earth's Future

Clusters of incompatible genotypes evolve with limited dispersal

scientific article published on 22 April 2015

Combined use of mark-recapture and genetic analyses reveals response of a black bear population to changes in food productivity

article by Barbara S. McCall et al published 3 October 2013 in Journal of Wildlife Management

Components of Spatial Information Management in Wildlife Ecology: Software for Statistical and Modeling Analysis

scholarly article published 2010

Conserving threatened riparian ecosystems in the American West: Precipitation gradients and river networks drive genetic connectivity and diversity in a foundation riparian tree (Populus angustifolia).

scientific article

Contrasting effects of human settlement on the interaction among sympatric apex carnivores

scientific article published on 27 April 2022

Detecting genotyping errors and describing American black bear movement in northern Idaho

article by Michael K. Schwartz et al published November 2006 in Ursus

Development of high-resolution (250 m) historical daily gridded air temperature data using reanalysis and distributed sensor networks for the US Northern Rocky Mountains

article

Differential adipogenic and inflammatory properties of small adipocytes in Zucker Obese and Lean rats

scientific article

Do forest community types provide a sufficient basis to evaluate biological diversity?

article by Samuel A Cushman et al published February 2008 in Frontiers in Ecology and the Environment

Editorial: Entropy in Landscape Ecology

scientific article published on 25 April 2018

Editorial: Operationalizing the Concepts of Resilience and Resistance for Managing Ecosystems and Species at Risk

scientific article published in 2020

Editorial: Synergistic Effects of Pervasive Stressors on Ecosystems and Biodiversity

scientific article published on 06 November 2020

Editorial: The Least Cost Path From Landscape Genetics to Landscape Genomics: Challenges and Opportunities to Explore NGS Data in a Spatially Explicit Context.

scientific article

Effects of habitat loss and fragmentation on amphibians: A review and prospectus

Effects of land use and climate change on functional and phylogenetic diversity of terrestrial vertebrates in a Himalayan biodiversity hotspot

scientific article published in 2022

Empirical modeling of spatial and temporal variation in warm season nocturnal air temperatures in two North Idaho mountain ranges, USA

scholarly article

Evaluating population connectivity for species of conservation concern in the American Great Plains

Evaluating the intersection of a regional wildlife connectivity network with highways

scientific article

Evaluating the sufficiency of protected lands for maintaining wildlife population connectivity in the U.S. northern Rocky Mountains

scientific article published in 2012

Forecasting habitat and connectivity for pronghorn across the Great Basin ecoregion

scientific article published on 23 August 2021

Gene flow in complex landscapes: testing multiple hypotheses with causal modeling.

article

Genetic Sampling of Palmer's Chipmunks in the Spring Mountains, Nevada

Genetic diversity and drivers of genetic differentiation of Reaumuria soongorica of the Inner Mongolia plateau in China

scientific article published in 2015

Genome sequencing and population genomics modeling provide insights into the local adaptation of weeping forsythia

scientific article published on 01 August 2020

Geographic Complexity: Concepts, Theories, and Practices

scientific article published in 2022

Gradient modeling of conifer species using random forests

article

Grand challenges in evolutionary and population genetics: the importance of integrating epigenetics, genomics, modeling, and experimentation

scientific article published on 8 July 2014

Graph Theory and Network Models in Landscape Genetics

article

HIERARCHICAL ANALYSIS OF FOREST BIRD SPECIES–ENVIRONMENT RELATIONSHIPS IN THE OREGON COAST RANGE

scientific article

Habitat Fragmentation Reduces Genetic Diversity and Connectivity of the Mexican Spotted Owl: A Simulation Study Using Empirical Resistance Models

article

Habitat amount mediates the effect of fragmentation on a pollinator's reproductive performance, but not on its foraging behaviour

scientific article published on 24 April 2020

Identification of human-carnivore conflict hotspots to prioritize mitigation efforts.

scientific article published on 5 November 2017

Improving habitat and connectivity model predictions with multi-scale resource selection functions from two geographic areas

scientific article published on 04 March 2019

In vivo microscopy reveals extensive embedding of capillaries within the sarcolemma of skeletal muscle fibers

scientific article

Integrating Sunda clouded leopard (Neofelis diardi) conservation into development and restoration planning in Sabah (Borneo)

scientific article published on 17 April 2019

Integrating spatial analysis and questionnaire survey to better understand human-onager conflict in Southern Iran

scientific article

Isolation by distance, resistance and/or clusters? Lessons learned from a forest-dwelling carnivore inhabiting a heterogeneous landscape

scientific article published on 23 September 2015

Landscape Genomics: A Brief Perspective

Landscape effects on gene flow for a climate-sensitive montane species, the American pika

scientific article

Landscape genetic connectivity in a riparian foundation tree is jointly driven by climatic gradients and river networks

scientific article

Landscape genetics for the empirical assessment of resistance surfaces: the European pine marten (Martes martes) as a target-species of a regional ecological network

scientific article

Landscape genomics reveals genetic evidence of local adaptation in a widespread tree, the Chinese wingnut ( Pterocarya stenoptera ) ⬇️

scientific article published on 31 December 2020

Machine learning in landscape ecological analysis: a review of recent approaches

scientific article published on 01 December 2021

Mediterranean scrubland and elevation drive gene flow of a Mediterranean carnivore, the Egyptian mongooseHerpestes ichneumon(Herpestidae)

article

Meta-replication, sampling bias, and multi-scale model selection: A case study on snow leopard (Panthera uncia) in western China

scientific article published on 06 July 2020

Metrics and Models for Quantifying Ecological Resilience at Landscape Scales

scientific article published in 2019

Modeling the effects of dispersal and patch size on predicted fisher (Pekania [Martes] pennanti) distribution in the U.S. Rocky Mountains

Modelling multilocus selection in an individual-based, spatially-explicit landscape genetics framework

scientific article published on 19 December 2019

Morphological Differences in Pinus strobiformis Across Latitudinal and Elevational Gradients

scientific article published on 22 October 2020

Multiple-scale prediction of forest loss risk across Borneo

article published in 2017

Operationalizing Ecological Resilience Concepts for Managing Species and Ecosystems at Risk

scientific article published in 2019

Population structure of the golden snub-nosed monkey Rhinopithecus roxellana in the Qinling Mountains, central China

scientific article published on 5 April 2016

Predicting biodiversity richness in rapidly changing landscapes: climate, low human pressure or protection as salvation?

scientific article published in 2020

Predicting connectivity, population size and genetic diversity of Sunda clouded leopards across Sabah, Borneo

scientific article published in 2019

Prey availability modulates predicted range contraction of two large felids in response to changing climate

scientific article published in 2021

Prioritizing core areas, corridors and conflict hotspots for lion conservation in southern Africa

scientific article published on 05 July 2018

Pushing the envelope in genetic analysis of species invasion

scientific article published in January 2015

Representing genetic variation as continuous surfaces: an approach for identifying spatial dependency in landscape genetic studies

scientific article published in 2008

Scale dependence in habitat selection: the case of the endangered brown bear (Ursus arctos) in the Cantabrian Range (NW Spain)

article

Scale dependence of felid predation risk: identifying predictors of livestock kills by tiger and leopard in Bhutan

scientific article published in 2016

Seascape genetics and connectivity modelling for an endangered Mediterranean coral in the northern Ionian and Adriatic seas

scientific article published on 10 October 2019

Sensitivity of landscape resistance estimates based on point selection functions to scale and behavioral state: pumas as a case study

scientific article published in 2014

Simulating impacts of rapid forest loss on population size, connectivity and genetic diversity of Sunda clouded leopards (Neofelis diardi) in Borneo

scientific article published in PLoS ONE

Southwestern white pine (Pinus strobiformis) species distribution models project a large range shift and contraction due to regional climatic changes

scientific article published in 2018

Spatial scaling and multi-model inference in landscape genetics: Martes americana in northern Idaho

article

Spatially Heterogeneous Environmental Selection Strengthens Evolution of Reproductively Isolated Populations in a Dobzhansky-Muller System of Hybrid Incompatibility

scientific article

Spatially-explicit estimation of Wright's neighborhood size in continuous populations

scientific article published in 2014

Spatio-temporal ecology of sympatric felids on Borneo. Evidence for resource partitioning?

scientific article published on 20 July 2018

Spatiotemporal variation in resource selection: insights from the American marten (Martes americana).

scientific article published in January 2014

Spotted owls and forest fire: Comment

scientific article

Spurious correlations and inference in landscape genetics

scientific article published on 7 July 2010

Targeting conifer removal to create an even playing field for birds in the Great Basin

scientific article published in May 2021

The devil is in the dispersers: predictions of landscape connectivity change with demography

article by Nicholas B. Elliot et al published 21 July 2014 in Journal of Applied Ecology

The effect of gene flow from unsampled demes in landscape genetic analysis

scientific article published on 04 October 2020

The effect of scale in quantifying fire impacts on species habitats

scientific article published on 12 March 2020

The role of hybridization during ecological divergence of southwestern white pine (Pinus strobiformis) and limber pine (P. flexilis).

scientific article published on 7 February 2018

Tracing the footprints of a moving hybrid zone under a demographic history of speciation with gene flow

scientific article published on 29 April 2019

Transcriptomic responses and physiological changes to cold stress among natural populations provide insights into local adaptation of weeping forsythia

scientific article published in 2021

Transcriptomic responses to drought stress among natural populations provide insights into local adaptation of weeping forsythia

scientific article published in 2021

Use of Empirically Derived Source-Destination Models to Map Regional Conservation Corridors

scientific article published on 02 November 2008

Use of abundance of one species as a surrogate for abundance of others

scientific article

Using Landscape Genetics Simulations for Planting Blister Rust Resistant Whitebark Pine in the US Northern Rocky Mountains

scientific article

Using step and path selection functions for estimating resistance to movement: pumas as a case study

scientific article published in 2015

Utility of computer simulations in landscape genetics

scientific article published on 07 July 2010

Winter bait stations as a multispecies survey tool

scientific article published on 27 July 2017

Wolverine gene flow across a narrow climatic niche

scientific article published on November 2009

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