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List of works by Marina A. Gritsenko

A Targeted Mass Spectrometric Assay for Reliable Sensitive Hepcidin Quantification

scientific article published on 13 May 2019

A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.

scientific article

A comprehensive collection of systems biology data characterizing the host response to viral infection.

scientific article

A proteomic view ofDesulfovibrio vulgaris metabolism as determined by liquid chromatography coupled with tandem mass spectrometry

scholarly article by Weiwen Zhang published in August 2006

Advancing the high throughput identification of liver fibrosis protein signatures using multiplexed ion mobility spectrometry

scientific article published on 08 January 2014

Antibody-independent targeted quantification of TMPRSS2-ERG fusion protein products in prostate cancer.

scientific article

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis

article

Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.

scientific article published on 20 December 2007

Applying a targeted label-free approach using LC-MS AMT tags to evaluate changes in protein phosphorylation following phosphatase inhibition

scientific article published on 12 October 2007

Blood peptidome-degradome profile of breast cancer

scientific article

Boosting to Amplify Signal with Isobaric Labeling (BASIL) Strategy for Comprehensive Quantitative Phosphoproteomic Characterization of Small Populations of Cells.

scientific article

Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa

scientific article published on 01 November 2019

Cerebrospinal Fluid Proteome of Patients with Acute Lyme Disease ⬇️

scientific article published on August 31, 2012

Characterization of Purifiedc-Type Heme-Containing Peptides and Identification ofc-Type Heme-Attachment Sites inShewanellaoneidenisCytochromes Using Mass Spectrometry

scientific article published on 01 May 2005

Characterization of the human pancreatic islet proteome by two-dimensional LC/MS/MS

scientific article

Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment

scientific article published on February 2006

Characterization of the mouse pancreatic islet proteome and comparative analysis with other mouse tissues

scientific article published on 21 June 2008

Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides

scientific article published on May 2009

Comparative phosphoproteomics reveals components of host cell invasion and post-transcriptional regulation during Francisella infection

scientific article published on 22 August 2013

Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry.

scientific article published on February 2005

Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention

scientific article published on 09 January 2020

Comprehensive identification of glycated peptides and their glycation motifs in plasma and erythrocytes of control and diabetic subjects

scientific article

Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

scientific article published on 01 August 2020

Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes

scientific article

Defective insulin receptor signaling in hPSCs skews pluripotency and negatively perturbs neural differentiation

Determination of burn patient outcome by large-scale quantitative discovery proteomics

scientific article published on June 2013

Discovery of novel glucose-regulated proteins in isolated human pancreatic islets using LC-MS/MS-based proteomics

scientific article

Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142.

scientific article

Dynamic Proteome Analysis of Cyanothece sp. ATCC 51142 under Constant Light

article

Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles

scientific article

Elucidating regulatory processes of intense physical activity by multi-omics analysis

journal article published in 2023

Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry.

scientific article published on 19 July 2006

Global Proteomic Analysis Reveals an Exclusive Role of Thylakoid Membranes in Bioenergetics of a Model Cyanobacterium

scientific article published on 07 April 2016

Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations

scientific article

High dynamic range characterization of the trauma patient plasma proteome

scientific article published on 9 May 2006

Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry

scientific article

Identification of a novel mitotic phosphorylation motif associated with protein localization to the mitotic apparatus

scientific article published on 30 October 2007

IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography-mass spectrometry for human plasma proteomics biomarker discovery.

scientific article published on 10 September 2011

Improved proteome coverage by using high efficiency cysteinyl peptide enrichment: the human mammary epithelial cell proteome

scientific article published on April 2005

Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.

scientific article published on 28 June 2016

Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics

scientific article

Integrative analysis of the mitochondrial proteome in yeast

scientific article

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

scientific article

LC-MS/MS based proteomic analysis and functional inference of hypothetical proteins in Desulfovibrio vulgaris

scientific article published on 15 September 2006

Large-Scale and Deep Quantitative Proteome Profiling Using Isobaric Labeling Coupled with Two-Dimensional LC-MS/MS.

scientific article published on January 2016

Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample

scientific article published on January 2009

Longitudinal analysis of host protein serum signatures of treatment and recovery in pulmonary tuberculosis

scientific article published in 2024

Macaque proteome response to highly pathogenic avian influenza and 1918 reassortant influenza virus infections

scientific article

Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation

scientific article published on 11 July 2016

Morphine produces immunosuppressive effects in nonhuman primates at the proteomic and cellular levels

scientific article

Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis

scientific article published on 15 November 2017

Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR

scientific article published on 12 June 2019

Phosphoproteomics profiling of human skin fibroblast cells reveals pathways and proteins affected by low doses of ionizing radiation

scientific article

Preconditioning in the Rhesus Macaque Induces a Proteomic Signature Following Cerebral Ischemia that Is Associated with Neuroprotection

scientific article published on 19 October 2018

Preserved DNA Damage Checkpoint Pathway Protects against Complications in Long-Standing Type 1 Diabetes

scientific article

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

scientific article published on 25 April 2019

Proteogenomic Characterization of Endometrial Carcinoma

scientific article published on 13 February 2020

Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

scientific article published on 10 April 2020

Proteome analysis of liver cells expressing a full-length hepatitis C virus (HCV) replicon and biopsy specimens of posttransplantation liver from HCV-infected patients

scientific article

Proteome and computational analyses reveal new insights into the mechanisms of hepatitis C virus-mediated liver disease posttransplantation

scientific article

Proteomic analysis of saliva in HIV-positive heroin addicts reveals proteins correlated with cognition

scientific article published on 09 April 2014

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

scientific article published on 15 May 2015

Proteomic profiling of exosomes leads to the identification of novel biomarkers for prostate cancer

scientific article

Proteomic profiling of human liver biopsies: hepatitis C virus-induced fibrosis and mitochondrial dysfunction

scientific article

QC-ART: A tool for real-time quality control assessment of mass spectrometry-based proteomics data

scientific article published on 17 April 2018

Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling.

scientific article

Quantitative analysis of human immunodeficiency virus type 1-infected CD4+ cell proteome: dysregulated cell cycle progression and nuclear transport coincide with robust virus production

scientific article published on 9 May 2007

Quantitative phosphoproteomic analysis of soybean root hairs inoculated with Bradyrhizobium japonicum

scientific article

Quantitative phosphoproteomics identifies filaggrin and other targets of ionizing radiation in a human skin model.

scientific article

Quantitative proteomics identifies altered O-GlcNAcylation of structural, synaptic and memory-associated proteins in Alzheimer's disease

scientific article published on 28 June 2017

Regulation of gene expression and subcellular protein distribution in MLO-Y4 osteocytic cells by lysophosphatidic acid: Relevance to dendrite outgrowth

scientific article

Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry

scientific article published on 01 July 2018

Residual tissue repositories as a resource for population-based cancer proteomic studies

scientific article published on 03 August 2018

Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

scientific article

Selective Enrichment Coupled with Proteomics to Identify S-Acylated Plasma Membrane Proteins in Arabidopsis

scientific article published on 01 December 2020

Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment

scientific article

SerpinB1 Promotes Pancreatic β Cell Proliferation

scientific article

Serum proteomics reveals systemic dysregulation of innate immunity in type 1 diabetes

scientific article published on 31 December 2012

Shotgun proteomics identifies proteins specific for acute renal transplant rejection.

scientific article

Simultaneous Proteomic Discovery and Targeted Monitoring using Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry

scientific article published on 25 September 2016

Sites of proteolytic processing and noncovalent association of the distal C-terminal domain of CaV1.1 channels in skeletal muscle

scientific article

Spatial phosphoprotein profiling reveals a compartmentalized extracellular signal-regulated kinase switch governing neurite growth and retraction

scientific article

Stable acinar progenitor cell model identifies treacle-dependent radioresistance

journal article published in 2019

Systems analysis of multiple regulator perturbations allows discovery of virulence factors in Salmonella

scientific article

Targeted Quantification of Phosphorylation Dynamics in the Context of EGFR-MAPK Pathway.

scientific article

Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer

scientific article published on 19 July 2017

Temporal Proteome and Lipidome Profiles Reveal Hepatitis C Virus-Associated Reprogramming of Hepatocellular Metabolism and Bioenergetics

scientific article (publication date: 2010)

The cerebrospinal fluid proteome in HIV infection: change associated with disease severity ⬇️

scientific article published on March 20, 2012

The current state of the art of quantitative phosphoproteomics and its applications to diabetes research

scientific article published on 09 March 2016

The influence of sample preparation and replicate analyses on HeLa Cell phosphoproteome coverage

scientific article published on 16 April 2008

The proteome and phosphoproteome of Neurospora crassa in response to cellulose, sucrose and carbon starvation.

scientific article

Transcriptomic and proteomic dynamics in the metabolism of a diazotrophic cyanobacterium, Cyanothece sp. PCC 7822 during a diurnal light-dark cycle

scientific article

Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools

scientific article published on 23 September 2020

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