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List of works by Yussanne Ma

A Children's Oncology Group and TARGET initiative exploring the genetic landscape of Wilms tumor.

scientific article published on 21 August 2017

A Hematogenous Route for Medulloblastoma Leptomeningeal Metastases

scientific article published on 31 May 2018

A Hematogenous Route for Medulloblastoma Leptomeningeal Metastases.

scientific article published in February 2018

A high-throughput protocol for isolating cell-free circulating tumor DNA from peripheral blood

scientific article published on 01 February 2019

A somatic reference standard for cancer genome sequencing

scientific article

Abstract 3087: Whole genome sequencing of rhabdoid tumors of the kidney

Abstract 4340: Integrating whole genome and transcriptome analysis to inform treatment decisions in the metastatic cancer clinical setting

Abstract 5340: Bioinformatic analyses approaches for personalized oncogenomics

Analysis of Ugandan cervical carcinomas identifies human papillomavirus clade-specific epigenome and transcriptome landscapes

scientific article published on 03 August 2020

Application of a Neural Network Whole Transcriptome-Based Pan-Cancer Method for Diagnosis of Primary and Metastatic Cancers

scientific article published on 05 April 2019

Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis. ⬇️

scientific article

CSF3R mutations have a high degree of overlap with CEBPA mutations in pediatric AML

scientific article published on 3 May 2016

Clinical outcomes after whole-genome sequencing in patients with metastatic non-small-cell lung cancer

scientific article published on 01 February 2019

Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing

scientific article published on 01 November 2019

Comparative RNA-Sequencing Analysis Benefits a Pediatric Patient With Relapsed Cancer

scientific article published on 19 April 2018

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

article

Comprehensive Characterization of Cancer Driver Genes and Mutations

article

Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma

scientific article published on 4 November 2015

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

article

Comprehensive characterization of pediatric AML reveals diverse fusion oncoproteins and age-specific mutational interactions

Comprehensive genomic profiling of glioblastoma tumors, BTICs, and xenografts reveals stability and adaptation to growth environments

scientific article published on 30 August 2019

Correction: miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer

scientific article published on March 2017

Epigenetic and transcriptional determinants of the human breast

scientific article

Erratum: The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions

scholarly article published in Nature Medicine

Fate mapping of human glioblastoma reveals an invariant stem cell hierarchy.

scientific article published on 30 August 2017

Genome-Wide Profiles of Extra-cranial Malignant Rhabdoid Tumors Reveal Heterogeneity and Dysregulated Developmental Pathways.

scientific article published on March 2016

Genome-wide discovery of somatic coding and noncoding mutations in pediatric endemic and sporadic Burkitt lymphoma

scientific article published on 07 January 2019

Genomic analyses identify recurrent MEF2D fusions in acute lymphoblastic leukaemia

scientific article

High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma

scientific article published on 27 June 2019

Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer

scientific article published in December 2017

IMMU-03. TUMOR NECROSIS FACTOR OVERCOMES IMMUNE EVASION IN P53-MUTANT MEDULLOBLASTOMA

Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration

scientific article published on 07 November 2019

Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing

scientific article

Integrative genomic analysis of ghost cell odontogenic carcinoma

scientific article published on 11 July 2015

Intratumoral Genetic and Functional Heterogeneity in Pediatric Glioblastoma

scientific article published on 15 March 2019

Large-scale profiling of microRNAs for The Cancer Genome Atlas.

scientific article published on 13 August 2015

Lessons learned from the application of whole-genome analysis to the treatment of patients with advanced cancers

scientific article published on October 2015

MAVIS: merging, annotation, validation, and illustration of structural variants

scholarly article by Caralyn Reisle published in July 2018

MLLT1 YEATS domain mutations in clinically distinctive Favourable Histology Wilms tumours.

scientific article

MicroRNA Expression-Based Model Indicates Event-Free Survival in Pediatric Acute Myeloid Leukemia

scientific article published on 25 October 2017

NRG1 Gene Fusions Are Recurrent, Clinically Actionable Gene Rearrangements in KRAS Wild-Type Pancreatic Ductal Adenocarcinoma

scientific article published on 08 May 2019

Opposing Effects of CREBBP Mutations Govern the Phenotype of Rubinstein-Taybi Syndrome and Adult SHH Medulloblastoma

scientific article published on 9 March 2018

Personalized oncogenomic analysis of metastatic adenoid cystic carcinoma: using whole-genome sequencing to inform clinical decision-making

scientific article published on 2 April 2018

Publisher Correction: The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions

scientific article published on 01 March 2019

Pyruvate Kinase Inhibits Proliferation during Postnatal Cerebellar Neurogenesis and Suppresses Medulloblastoma Formation.

scientific article published on 17 May 2017

Quiescent sox2(+) cells drive hierarchical growth and relapse in sonic hedgehog subgroup medulloblastoma

scientific article published on 19 June 2014

Recurrent DGCR8, DROSHA, and SIX Homeodomain Mutations in Favorable Histology Wilms Tumors

Recurrent DGCR8, DROSHA, and SIX homeodomain mutations in favorable histology Wilms tumors.

scientific article published on February 2015

Significance of TP53 Mutation in Wilms Tumors with Diffuse Anaplasia: A Report from the Children's Oncology Group.

scientific article

Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples.

scientific article published in January 2019

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

article

The Genome of the Beluga Whale (Delphinapterus leucas).

scientific article published on 11 December 2017

The Genome of the Northern Sea Otter (Enhydra lutris kenyoni).

scientific article published on 11 December 2017

The genetic basis and cell of origin of mixed phenotype acute leukaemia

scientific article published in Nature

The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions.

scientific article published on 11 December 2017

The whole-genome landscape of medulloblastoma subtypes

scientific article published in July 2017

Tumor microRNA profile and prognostic value for lymph node metastasis in oral squamous cell carcinoma patients

scientific article published on 09 June 2020

Tumor necrosis factor overcomes immune evasion in p53-mutant medulloblastoma

scientific article published on 18 May 2020

miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer.

scientific article published on 27 March 2016

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