List of works - Justin Kuczynski

A microbiota signature associated with experimental food allergy promotes allergic sensitization and anaphylaxis

scientific article

An in vitro culture model to study the dynamics of colonic microbiota in Syrian golden hamsters and their susceptibility to infection with Clostridium difficile

scientific article

Bayesian community-wide culture-independent microbial source tracking

scientific article published on 17 July 2011

Changes in abundance of oral microbiota associated with oral cancer

scientific article

Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation

scientific article (publication date: October 2011)

Comparative genomics of the Bifidobacterium breve taxon

scientific article

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

scientific article (publication date: 20 May 2011)

Direct sequencing of the human microbiome readily reveals community differences

scientific article

Experimental and analytical tools for studying the human microbiome

scientific article

Gut microbiota in multiple sclerosis: possible influence of immunomodulators

scientific article published on June 2015

Human gut microbiome viewed across age and geography

scientific article

Identifying qualitative effects of different grazing types on below-ground communities and function in a long-term field experiment

scientific article

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

scientific article published on 5 September 2010

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article

Murine norovirus infection does not cause major disruptions in the murine intestinal microbiota

scientific article

QIIME allows analysis of high-throughput community sequencing data

scientific article

Supervised classification of microbiota mitigates mislabeling errors

scientific article

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

2012 scientific article

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

Using QIIME to analyze 16S rRNA gene sequences from microbial communities

scientific article

Using QIIME to analyze 16S rRNA gene sequences from microbial communities

article

List of works by Justin Kuczynski

A microbiota signature associated with experimental food allergy promotes allergic sensitization and anaphylaxis

An in vitro culture model to study the dynamics of colonic microbiota in Syrian golden hamsters and their susceptibility to infection with Clostridium difficile

Bayesian community-wide culture-independent microbial source tracking

Changes in abundance of oral microbiota associated with oral cancer

Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation

Comparative genomics of the Bifidobacterium breve taxon

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

Direct sequencing of the human microbiome readily reveals community differences

Experimental and analytical tools for studying the human microbiome

Gut microbiota in multiple sclerosis: possible influence of immunomodulators

Human gut microbiome viewed across age and geography

Identifying qualitative effects of different grazing types on below-ground communities and function in a long-term field experiment

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

Murine norovirus infection does not cause major disruptions in the murine intestinal microbiota

QIIME allows analysis of high-throughput community sequencing data

Supervised classification of microbiota mitigates mislabeling errors

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

Using QIIME to analyze 16S rRNA gene sequences from microbial communities

Using QIIME to analyze 16S rRNA gene sequences from microbial communities