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List of works by Vincent Lombard

A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep

scientific article

A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9.

scientific article published on 13 April 2017

A catalog of microbial genes from the bovine rumen reveals the determinants of herbivory

article

A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment

scientific article published on 01 June 2020

A hierarchical classification of polysaccharide lyases for glycogenomics

scientific article

A metagenomics investigation of carbohydrate-active enzymes along the goat and camel intestinal tract

scientific article published on 14 March 2019

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).

scientific article published on 31 January 2018

A model species for agricultural pest genomics: the genome of the Colorado potato beetle,Leptinotarsa decemlineata(Coleoptera: Chrysomelidae)

scholarly article published 22 September 2017

A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)

scientific article published on 09 September 2019

Analysis of the diversity of the glycoside hydrolase family 130 in mammal gut microbiomes reveals a novel mannoside-phosphorylase function

scientific article published on 15 July 2020

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species

scientific article

Bacteria from diverse habitats colonize and compete in the mouse gut.

scientific article

Bacteroidetes use thousands of enzyme combinations to break down glycans

scientific article published on 03 May 2019

Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome.

scientific article published on 6 October 2016

CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems

scientific article

Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment

scientific article published on 20 December 2017

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

scientific article

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

scientific article published on 20 March 2012

Complex carbohydrate utilization by the healthy human microbiome

scientific article

Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures.

scientific article

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.

scientific article published on 19 March 2018

Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

article

Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses

scientific article published on 15 February 2017

Discovery of hyperstable carbohydrate-active enzymes through metagenomics of extreme environments

scientific article published on 21 October 2019

Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space

scientific article published on 08 March 2019

Dividing the Large Glycoside Hydrolase Family 43 into Subfamilies: a Motivation for Detailed Enzyme Characterization

scientific article published on 4 January 2016

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

scientific article

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

scientific article

Feed in summer, rest in winter: microbial carbon utilization in forest topsoil

scientific article published on 18 September 2017

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis

scientific article

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

scientific article published on 8 October 2012

Genome sequence of the model mushroom Schizophyllum commune

scientific article

Gut microbiota from twins discordant for obesity modulate metabolism in mice

scientific article (publication date: 6 September 2013)

Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults

scientific article published on 31 July 2015

How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans

scientific article

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

scientific article published on 28 March 2012

Investigating host-microbiome interactions by droplet based microfluidics

scientific article published on 01 October 2020

Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

scientific article published on 12 October 2020

Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut

scientific article published on 13 November 2020

Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation

scientific article published on 21 July 2017

PULDB: the expanded database of Polysaccharide Utilization Loci

scientific article published on 27 October 2017

Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme

scientific article

Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber

scientific article published on 14 September 2020

RETRACTED ARTICLE: Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition

scientific article published on 17 May 2016 and retracted on 30 October 2023

Role of glycoside phosphorylases in mannose foraging by human gut bacteria

scientific article published on 16 September 2013

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

scientific article published on 22 January 2018

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

scientific article

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

scientific article

The carbohydrate-active enzymes database (CAZy) in 2013

scientific article (publication date: 2014)

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

scientific article

Trichoderma reesei Dehydrogenase, a Pyrroloquinoline Quinone-Dependent Member of Auxiliary Activity Family 12 of the Carbohydrate-Active Enzymes Database: Functional and Structural Characterization

scientific article published on 27 November 2019

α-Galactosidase and Sucrose-Kinase Relationships in a Bi-functional AgaSK Enzyme Produced by the Human Gut Symbiont <i>Ruminococcus gnavus</i> E1

scientific article published on 12 November 2020

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