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List of works by Fábio de Oliveira Pedrosa

2-Oxoglutarate levels control adenosine nucleotide binding by Herbaspirillum seropedicae PII proteins.

scientific article

A Novel Ecological Approach Reveals Early Executive Function Impairments in Huntington's Disease

scientific article published on 22 March 2019

A new system to control the barnase expression by a NifA-dependent promoter

scientific article published in July 2005

A transthyretin-related protein is functionally expressed in Herbaspirillum seropedicae

scientific article published on 24 July 2009

ADAM33 gene silencing by promoter hypermethylation as a molecular marker in breast invasive lobular carcinoma

scientific article

ADP-ribosylation of dinitrogenase reductase in Azospirillum brasilense is regulated by AmtB-dependent membrane sequestration of DraG.

scientific article published in January 2006

Antibiosis by Bacillus amyloliquefaciens ribonuclease barnase expressed in Escherichia coli against symbiotic and endophytic nitrogen-fixing bacteria

scientific article published on 23 June 2006

Apolipoprotein B gene polymorphisms g.2488C>T and g.4154G>A are not associated with coronary artery disease in a Brazilian population

scientific article published in May 2009

Biochemical characteristics, adhesion, and cytotoxicity of environmental and clinical isolates of Herbaspirillum spp.

scientific article

Biochemical markers in sickle cell disease in a Brazilian population

scientific article published on 09 July 2009

Biotext: Exploiting Biological-Text Format for Text Mining

Cecal Microbiota in Broilers Fed with Prebiotics

scientific article published on 17 October 2017

Characteristics of an Aeromonas trota strain isolated from cerebrospinal fluid

scientific article published on 16 January 2018

Characterization of the orf1glnKamtB operon of Herbaspirillum seropedicae

scientific article published on 06 December 2005

Comparative Genomics of Sibling Species of Fonsecaea Associated with Human Chromoblastomycosis

scientific article

Comparative proteome analysis of Xanthomonas campestris pv. campestris in the interaction with the susceptible and the resistant cultivars of Brassica oleracea

scientific article published on 14 July 2009

Complete Genome Sequence of Herbaspirillum hiltneri N3 (DSM 17495), Isolated from Surface-Sterilized Wheat Roots.

scientific article

Conserved histidine residues at the ferroxidase centre of the Campylobacter jejuni Dps protein are not strictly required for metal binding and oxidation.

scientific article published on 9 November 2015

Control of autogenous activation of Herbaspirillum seropedicae nifA promoter by the IHF protein.

scientific article

Crystal structure of dinitrogenase reductase-activating glycohydrolase (DraG) reveals conservation in the ADP-ribosylhydrolase fold and specific features in the ADP-ribose-binding pocket

scientific article

Crystal structure of the GlnZ-DraG complex reveals a different form of PII-target interaction

scientific article

Culture conditions for the production of an acidic exopolysaccharide by the nitrogen-fixing bacterium Burkholderia tropica

scientific article

Defluorination of Sodium Fluoroacetate by Bacteria from Soil and Plants in Brazil ⬇️

scientific article published on April 24, 2012

Determination of lipase activity using image analysis

scientific article published on 8 February 2006

Differential growth responses of Brachypodium distachyon genotypes to inoculation with plant growth promoting rhizobacteria.

scientific article

Direct and indirect effects of a pH gradient bring insights into the mechanisms driving prokaryotic community structures.

scientific article published on 11 June 2018

Draft Genome Sequence of Aeromonas caviae 8LM, Isolated from Stool Culture of a Child with Diarrhea.

scientific article published on 21 May 2015

Draft Genome Sequence of Fonsecaea monophora Strain CBS 269.37, an Agent of Human Chromoblastomycosis

scientific article

Draft Genome Sequence of Fonsecaea nubica Strain CBS 269.64, Causative Agent of Human Chromoblastomycosis

scientific article

Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water.

scientific article published on January 2013

Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes.

scientific article

Dynamics of the Escherichia coli proteome in response to nitrogen starvation and entry into the stationary phase

scientific article published on 8 December 2016

Effect of T- and C-loop mutations on the Herbaspirillum seropedicae GlnB protein in nitrogen signalling.

scientific article

Effect of the over-expression of PII and PZ proteins on the nitrogenase activity of Azospirillum brasilense

scientific article published on 05 October 2005

Effects of over-expression of the regulatory enzymes DraT and DraG on the ammonium-dependent post-translational regulation of nitrogenase reductase in Azospirillum brasilense.

scientific article

Endophytic Herbaspirillum seropedicae expresses nif genes in gramineous plants

scientific article published on 01 July 2003

Expression and purification of untagged GlnK proteins from actinobacteria.

scientific article published on 27 June 2017

Expression, purification and biochemical characterization of a single-stranded DNA binding protein from Herbaspirillum seropedicae

scientific article published on 5 December 2006

Expression, purification and characterization of the transcription termination factor Rho from Azospirillum brasilense

scientific article published in October 2022

Expression, purification, and DNA-binding activity of the Herbaspirillum seropedicae RecX protein

scientific article

Expression, purification, and DNA-binding activity of the solubilized NtrC protein of Herbaspirillum seropedicae.

scientific article

Expression, purification, and functional analysis of the C-terminal domain of Herbaspirillum seropedicae NifA protein.

scientific article published in February 2003

FGAP: an automated gap closing tool

scientific article

First evidence for the salt-dependent folding and activity of an esterase from the halophilic archaea Haloarcula marismortui

scientific article published on 17 March 2009

Fnr is involved in oxygen control of Herbaspirillum seropedicae N-truncated NifA protein activity in Escherichia coli

scientific article

GFinisher: a new strategy to refine and finish bacterial genome assemblies.

scientific article published on 10 October 2016

Genome Analysis of Entomopathogenic Bacillus sp. ABP14 Isolated from a Lignocellulosic Compost.

scientific article published in June 2019

Genome comparison between clinical and environmental strains of Herbaspirillum seropedicae reveals a potential new emerging bacterium adapted to human hosts

scientific article published on 02 August 2019

Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses

scientific article

Genome sequence of the diazotrophic Gram-positive rhizobacterium Paenibacillus riograndensis SBR5(T).

scientific article published on November 2011

Genomic comparison of the endophyte Herbaspirillum seropedicae SmR1 and the phytopathogen Herbaspirillum rubrisubalbicans M1 by suppressive subtractive hybridization and partial genome sequencing.

scientific article

Genomic landscape of SARS-CoV-2 pandemic in Brazil suggests an external P.1 variant origin

GlnB is specifically required for Azospirillum brasilense NifA activity in Escherichia coli.

scientific article

Heat stability of Proteobacterial PII protein facilitate purification using a single chromatography step.

scientific article

Herbaspirillum seropedicae rfbB and rfbC genes are required for maize colonization ⬇️

scientific article published on March 7, 2010

Herbaspirillum seropedicae signal transduction protein PII is structurally similar to the enteric GlnK

scientific article

Identification and characterization of PhbF: a DNA binding protein with regulatory role in the PHB metabolism of Herbaspirillum seropedicae SmR1.

scientific article

Identification and characterization of a new true lipase isolated through metagenomic approach.

scientific article

Identification of NH4+-regulated genes of Herbaspirillum seropedicae by random insertional mutagenesis

scientific article published on 24 February 2007

Identification of a new lipase family in the Brazilian Atlantic Forest soil metagenome

scientific article

Identification of proteins associated with polyhydroxybutyrate granules from Herbaspirillum seropedicae SmR1--old partners, new players

scientific article

Impact of Aeromonas and diarrheagenic Escherichia coli screening in patients with diarrhea in Paraná, southern Brazil.

scientific article published on 15 December 2014

In silico comparative analysis of Aeromonas Type VI Secretion System

scientific article published on 06 January 2021

In vitro characterization of the NAD+ synthetase NadE1 from Herbaspirillum seropedicae

scientific article published on 22 January 2016

In vitro interaction between the ammonium transport protein AmtB and partially uridylylated forms of the P(II) protein GlnZ.

scientific article published on 27 May 2011

In vitro interactions between the PII proteins and the nitrogenase regulatory enzymes dinitrogenase reductase ADP-ribosyltransferase (DraT) and dinitrogenase reductase-activating glycohydrolase (DraG) in Azospirillum brasilense

scientific article published on 8 January 2009

In vitro uridylylation of the Azospirillum brasilense N-signal transducing GlnZ protein

scientific article published in January 2004

Influence of ancient anthropogenic activities on the mangrove soil microbiome

scientific article published on 14 July 2018

Influence of seasonality on the aerosol microbiome of the Amazon rainforest

scientific article published on 14 December 2020

Influence of the ADP/ATP ratio, 2-oxoglutarate and divalent ions on Azospirillum brasilense PII protein signalling

scientific article published on 29 March 2012

Inoculation with selected strains of Azospirillum brasilense and A. lipoferum improves yields of maize and wheat in Brazil

article

Interaction of GlnK with the GAF domain of Herbaspirillum seropedicae NifA mediates NH₄⁺-regulation

scientific article published on 15 January 2012

Interactions between PII proteins and the nitrogenase regulatory enzymes DraT and DraG in Azospirillum brasilense

scientific article published on 05 September 2006

Iron depletion affects nitrogenase activity and expression of nifH and nifA genes in Herbaspirillum seropedicae

scientific article published on 01 May 2006

Molecular adaptations of Herbaspirillum seropedicae during colonization of the maize rhizosphere.

scientific article published on 29 April 2015

Monitoring Azospirillum-wheat interactions using the gfp and gusA genes constitutively expressed from a new broad-host range vector.

scientific article

NAD+ biosynthesis in bacteria is controlled by global carbon/nitrogen levels via PII signaling

scientific article published on 16 March 2020

Nitrogenase switch-off by ammonium ions in Azospirillum brasilense requires the GlnB nitrogen signal-transducing protein.

scientific article published on September 2005

PII signal transduction proteins: pivotal players in post-translational control of nitrogenase activity.

scientific article published on January 2012

Proteome analysis of an Escherichia coli ptsN-null strain under different nitrogen regimes.

scientific article published on 20 December 2017

Proteomic analysis of Herbaspirillum seropedicae reveals ammonium-induced AmtB-dependent membrane sequestration of PII proteins

scientific article

Proteomic analysis of upland rice (Oryza sativa L.) exposed to intermittent water deficit

scientific article

Proteomic and Metabolomic Analysis of Azospirillum brasilense ntrC Mutant under High and Low Nitrogen Conditions

scientific article published on 25 October 2019

Purification and characterization of the bifunctional uridylyltransferase and the signal transducing proteins GlnB and GlnK from Herbaspirillum seropedicae

scientific article published on 25 April 2007

Purification of the Campylobacter jejuni Dps protein assisted by its high melting temperature.

scientific article

RNA-seq analyses reveal insights into the function of respiratory nitrate reductase of the diazotroph Herbaspirillum seropedicae.

scientific article published on 20 June 2016

Regulation of glnB gene promoter expression in Azospirillum brasilense by the NtrC protein.

scientific article

Regulation of nitrogenase by reversible mono-ADP-ribosylation

scientific article

Repetitive genomic elements in Campomanesia xanthocarpa: prospection, characterization and cross amplification of molecular markers

scientific article published on 28 October 2019

Repressor mutant forms of the Azospirillum brasilense NtrC protein

scientific article published on October 2004

Robust biological nitrogen fixation in a model grass-bacterial association.

scientific article published in March 2015

Role of PII proteins in nitrogen fixation control of Herbaspirillum seropedicae strain SmR1

scientific article

Role of conserved cysteine residues in Herbaspirillum seropedicae NifA activity.

scientific article published on 30 June 2009

SWeeP: representing large biological sequences datasets in compact vectors

scientific article published on 09 January 2020

Search for novel targets of the PII signal transduction protein in Bacteria identifies the BCCP component of acetyl-CoA carboxylase as a PII binding partner

scientific article published on 06 January 2014

Spectroscopic characterization of a truncated hemoglobin from the nitrogen-fixing bacterium Herbaspirillum seropedicae

scientific article published on 12 June 2008

Structural analysis of Herbaspirillum seropedicae lipid-A and of two mutants defective to colonize maize roots

scientific article published on 04 June 2012

Structural characterization of an acidic exoheteropolysaccharide produced by the nitrogen-fixing bacterium Burkholderia tropica

scientific article published on 10 January 2008

Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae

scientific article

Ternary complex formation between AmtB, GlnZ and the nitrogenase regulatory enzyme DraG reveals a novel facet of nitrogen regulation in bacteria

scientific article

The -374A allele of the receptor for advanced glycation end products (RAGE) gene promoter is a protective factor against cardiovascular lesions in type 2 diabetes mellitus patients

scientific article published on 01 January 2007

The -429 T>C polymorphism of the receptor for advanced glycation end products (RAGE) is associated with type 1 diabetes in a Brazilian population

scientific article published on 13 April 2007

The Herbaspirillum seropedicae SmR1 Fnr orthologs controls the cytochrome composition of the electron transport chain

scientific article published on January 2013

The NADP-dependent malic enzyme MaeB is a central metabolic hub controlled by the acetyl-CoA to CoASH ratio

scientific article published on 30 May 2020

The NtrY-NtrX two-component system is involved in controlling nitrate assimilation in Herbaspirillum seropedicae strain SmR1.

scientific article published on 16 September 2016

The Protein-Protein Interaction Network Reveals a Novel Role of the Signal Transduction Protein PII in the Control of c-di-GMP Homeostasis in Azospirillum brasilense

scientific article published on 03 November 2020

The ammonium transporter AmtB and the PII signal transduction protein GlnZ are required to inhibit DraG in Azospirillum brasilense

scientific article published on 12 February 2019

The bacterial signal transduction protein GlnB regulates the committed step in fatty acid biosynthesis by acting as a dissociable regulatory subunit of acetyl-CoA carboxylase

scientific article published on 30 January 2015

The deuridylylation activity of Herbaspirillum seropedicae GlnD protein is regulated by the glutamine:2-oxoglutarate ratio

scientific article published on 02 October 2018

The expression of nifB gene from Herbaspirillum seropedicae is dependent upon the NifA and RpoN proteins

scientific article published in December 2006

The ghrelin gene allele 51Q (rs34911341) is a protective factor against the development of gestational diabetes

scientific article published on 10 February 2010

The glnAntrBC operon of Herbaspirillum seropedicae is transcribed by two oppositely regulated promoters upstream of glnA

scientific article published on 01 January 2007

The glucokinase gene promoter polymorphism -30G>A (rs1799884) is associated with fasting glucose in healthy pregnant women but not with gestational diabetes

scientific article published on 12 March 2010

The involvement of the nif-associated ferredoxin-like genes fdxA and fdxN of Herbaspirillum seropedicae in nitrogen fixation

scientific article published on 01 February 2010

The nitrogenase regulatory enzyme dinitrogenase reductase ADP-ribosyltransferase (DraT) is activated by direct interaction with the signal transduction protein GlnB

scientific article published on 9 November 2012

The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T is genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72.

scientific article published on 28 November 2016

The recX gene product is involved in the SOS response in Herbaspirillum seropedicae.

scientific article published in February 2003

The type III secretion system is necessary for the development of a pathogenic and endophytic interaction between Herbaspirillum rubrisubalbicans and Poaceae.

scientific article

Transcriptional Responses of <i>Herbaspirillum seropedicae</i> to Environmental Phosphate Concentration

scientific article published on 10 June 2021

Uncovering prokaryotic biodiversity within aerosols of the pristine Amazon forest

scientific article published on 15 June 2019

Uridylylation of Herbaspirillum seropedicae GlnB and GlnK proteins is differentially affected by ATP, ADP and 2-oxoglutarate in vitro

scientific article published on 01 March 2012

Utilization of carbon sources by clinical isolates of Aeromonas

scientific article published on 22 December 2016

Virulence characteristics and antimicrobial resistance of Aeromonas veronii biovar sobria 312M, a clinical isolate

scientific article published on 09 November 2019

Virulence properties and antimicrobial susceptibility of Shiga toxin-producing Escherichia coli strains isolated from healthy cattle from Paraná State, Brazil.

scientific article

rSWeeP: A R/Bioconductor package deal with SWeeP sequences representation

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