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List of works by David J. Cooper

A Lidar Approach to Evapotranspiration Estimation in Riparian Areas (New Mexico)

A framework for understanding the hydroecology of impacted wet meadows in the Sierra Nevada and Cascade Ranges, California, USA

scientific article published on 05 November 2008

A geomorphic classification of ephemeral channels in a mountainous, arid region, southwestern Arizona, USA

A new approach for hydrologic performance standards in wetland mitigation

scientific article published on 15 November 2018

A new method for restoring ditches in peatlands: ditch filling with fiber bales

scientific article published on 16 April 2018

A randomized phase 3 study comparing once-daily elvitegravir with twice-daily raltegravir in treatment-experienced subjects with HIV-1 infection: 96-week results

scientific article published on August 2013

A10 Using the molecular epidemiology of HIV transmission in New South Wales to inform public health response: Assessing the representativeness of linked phylogenetic data.

scientific article published on 17 April 2018

Abert's Squirrel above Treeline on the San Francisco Peaks, Arizona

scientific article published on 9 December 1987

Additions to the Peatland Flora of the Southern Rocky Mountains: Habitat Descriptions and Water Chemistry

scientific article published in 1991

Alpine Peatlands of the Andes, Cajamarca, Peru

scientific article published in 2010

Alteration of hydrogeomorphic processes by invasive beavers in southern South America

scientific article published on 13 September 2016

An overview of peatland restoration in North America: where are we after 25 years?

scientific article published on 27 September 2016

Analysis of sediment retention in western riverine wetlands: the Yampa River watershed, Colorado, USA.

scientific article published in March 2004

Annual groundwater evapotranspiration mapped from single satellite scenes

scientific article published in 2007

Assessing the seasonality of the oceanic sink for CO2in the northern hemisphere

Assessment of stream ecosystem function and sensitivity in the Bighorn National Forest, Wyoming.

scientific article published on 4 June 2007

Atmospheric sulfur cycling in the tropical Pacific marine boundary layer (12°S, 135°W): A comparison of field data and model results: 1. Dimethylsulfide

scientific article published in 1996

Beaver assisted river valley formation

Beaver dams and overbank floods influence groundwater-surface water interactions of a Rocky Mountain riparian area

article by Cherie J. Westbrook et al published June 2006 in Water Resources Research

Biodiversity and ecosystem services science for a sustainable planet: the DIVERSITAS vision for 2012-20

scientific article

Brief Report: Enhanced Normalization of CD4/CD8 Ratio With Earlier Antiretroviral Therapy at Primary HIV Infection

scientific article published on 6 April 2016

CD4-guided scheduled treatment interruptions compared with continuous therapy for patients infected with HIV-1: results of the Staccato randomised trial

scientific article published on August 2006

Can long‐lived species keep pace with climate change? Evidence of local persistence potential in a widespread conifer

scientific article published in 2020

Canopy shade and the successional replacement of tamarisk by native box elder

scientific article published in 2008

Changes over calendar time in the risk of specific first AIDS-defining events following HIV seroconversion, adjusting for competing risks

scientific article

Chemokine receptor genotype and response to interleukin-2 therapy in HIV-1-infected individuals

article

Climatic controls of Pinus pumila radial growth along an altitude gradient

scientific article published in 2021

Clinical management of treatment-experienced, HIV-infected patients with the fusion inhibitor enfuvirtide: consensus recommendations

scientific article published on May 2004

Conservation breeding of Shortfin eelsAnguilla australisand Giant kokopuGalaxias argenteusat Mahurangi Technical Institute using aquarium and aquaculture techniques

Creation of a drug fund for post-clinical trial access to antiretrovirals

scientific article published on 01 July 2004

DRIVERS OF RIPARIAN TREE INVASION ON A DESERT STREAM

article by L. V. Reynolds et al published 30 October 2012 in River Research and Applications

Dams, floodplain land use, and riparian forest conservation in the semiarid Upper Colorado River Basin, USA.

scientific article published on 6 June 2007

Determinants of conifer distributions across peatland to forest gradients in the coastal temperate rainforest of southeast Alaska

scientific article published in 2015

Determining the timing of willow shrub dieback using epicormic shoots

scientific article published on 25 August 2014

Development of HIV with drug resistance after CD4 cell count-guided structured treatment interruptions in patients treated with highly active antiretroviral therapy after dual-nucleoside analogue treatment

scientific article published on 4 February 2005

Dewatering sludge originating in water treatment works in reed bed systems ⬇️

scientific article published on 01 January 2011

Differences in tree and shrub growth responses to climate change in a boreal forest in China

scientific article published in 2020

Do Beaver Dam Analogues Really Mimic Beaver Dams?

scientific article

Does restoring apex predators to food webs restore ecosystems? Large carnivores in Yellowstone as a model system

scientific article published on 30 January 2024

Drivers of peatland water table dynamics in the central Andes, Bolivia and Peru

scientific article published in 2019

Duration of HIV-1 viral suppression on cessation of antiretroviral therapy in primary infection correlates with time on therapy

scientific article published on 25 October 2013

Dynamics of T cells and TCR excision circles differ after treatment of acute and chronic HIV infection.

scientific article published in October 2002

Ecohydrological characteristics of a newly identified coastal raised bog on the western Olympic Peninsula, Washington State, USA

scientific article

Ecology: The Convention on Biological Diversity's 2010 target

scientific article

Economic assessment of aerated constructed treatment wetlands using whole life costing

scientific article published on 01 July 2019

Ecosystem response to removal of exotic riparian shrubs and a transition to upland vegetation

scientific article published in 2011

Effect of immediate initiation of antiretroviral therapy on risk of severe bacterial infections in HIV-positive people with CD4 cell counts of more than 500 cells per μL: secondary outcome results from a randomised controlled trial

scientific article published on 04 January 2017

Effectiveness of Ditch Blockage for Restoring Hydrologic and Soil Processes in Mountain Peatlands

scientific article published on 12 October 2013

Effects of groundwater pumping on the sustainability of a mountain wetland complex, Yosemite National Park, California

Effects of land use on the hydrologic regime, vegetation, and hydraulic conductivity of peatlands in the central Peruvian Andes

scientific article published in 2022

Effects of long-term water table drawdown on evapotranspiration and vegetation in an arid region phreatophyte community

scientific article published in 2006

Efficacy And Safety of Three Doses of Tipranavir Boosted with Ritonavir in Treatment-Experienced HIV Type 1-Infected Patients

article

Efficacy and safety of darunavir-ritonavir at week 48 in treatment-experienced patients with HIV-1 infection in POWER 1 and 2: a pooled subgroup analysis of data from two randomised trials

scientific article

Efficacy of enfuvirtide in patients infected with drug-resistant HIV-1 in Europe and Australia

scientific article published in May 2003

Elk browsing increases aboveground growth of water-stressed willows by modifying plant architecture.

scientific article published on 13 October 2007

Enfuvirtide in HIV-1-infected individuals changing therapy to a nucleoside reverse transcriptase inhibitor sparing regimen: the ALLIANCE Study

article

Enhanced normalisation of CD4/CD8 ratio with early antiretroviral therapy in primary HIV infection

scientific article

Environmental tolerance of an invasive riparian tree and its potential for continued spread in the southwestern US

Establishing a context for river rehabilitation, North Fork Gunnison River, Colorado

scientific article published in May 2005

Establishing peat‐forming plant communities: A comparison of wetland reclamation methods in Alberta's oil sands region

scientific article published on 27 November 2023

Establishing vegetation on a constructed fen in a post-mined landscape in Alberta’s oil sands region: A four-year evaluation after species introduction

scientific article published in 2019

Evaluating Success of Alternative Restoration Methods for Riparian Willows: Seeding and Ungulate Exclosures

scientific article published on 17 May 2018

Factors controlling the establishment of Fremont cottonwood seedlings on the Upper Green River, USA

Failures of 1 week on, 1 week off antiretroviral therapies in a randomized trial

scientific article published in October 2003

False negative HIV-1 proviral DNA polymerase chain reaction in a patient with primary infection acquired in Thailand.

scientific article

Ground water discharge by evapotranspiration in wetlands of an arid intermountain basin

scientific article published in 2008

Growing season carbon gas exchange from peatlands used as a source of vegetation donor material for restoration

scientific article

Growth and Organic Carbon Production in Peatlands Dominated by Distichia muscoides, Bolivia, South America

scholarly article by David J. Cooper et al published August 2015 in Arctic, Antarctic, and Alpine Research

HIV-1 DNA predicts disease progression and post-treatment virological control

scientific article

Habitat Overlap and Facilitation in Tamarisk and Box Elder Stands: Implications for Tamarisk Control Using Native Plants

article

Highly active antiretroviral therapy (HAART) retreatment in patients on CD4-guided therapy achieved similar virologic suppression compared with patients on continuous HAART: the HIV Netherlands Australia Thailand Research Collaboration 001.4 study

scientific article published in August 2005

Hydrologic regime and herbivory stabilize an alternative state in Yellowstone National Park.

scientific article

Hydrologic restoration of a fen in Rocky Mountain National Park, Colorado, USA

scientific article published on 13 February 2010

Hydrologic similarity to reference wetlands does not lead to similar plant communities in restored wetlands

scientific article published on 06 May 2019

Hydrologic, geomorphic and climatic processes controlling willow establishment in a montane ecosystem

scientific article

Hydrological dynamics and associated greenhouse gas fluxes in a mountain peatland under different climate scenarios

scientific article published in 2023

Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries

scientific article published on January 2014

Influence of the Atlantic Multidecadal Oscillation on drought in northern Daxing’an Mountains, Northeast China

scientific article published on 05 November 2020

Interacting Regional-Scale Regime Shifts for Biodiversity and Ecosystem Services

article

Interaction between nitrogen and sulfur cycles in the polluted marine boundary layer

scientific article published in 1996

Interactions among herbivory, climate, topography and plant age shape riparian willow dynamics in northern Yellowstone National Park, USA

scientific article published on 18 February 2014

Interactions of sapsuckers and Cytospora canker can facilitate decline of riparian willows

scientific article published on 18 April 2014

Irrigation canals are newly created streams of semi-arid agricultural regions

scientific article published on 29 July 2018

Large decrease in ocean-surface CO2 fugacity in response to in situ iron fertilization

scientific article published in Nature

Levels of novel hybridization in the saltcedar invasion compared over seven decades

Limited evolution of HIV antiretroviral drug resistance-associated mutations during the performance of drug resistance testing.

scientific article

Low levels of perforin expression in CD8+ T lymphocyte granules in lymphoid tissue during acute human immunodeficiency virus type 1 infection

scientific article

Maraviroc, as a Switch Option, in HIV-1-infected Individuals With Stable, Well-controlled HIV Replication and R5-tropic Virus on Their First Nucleoside/Nucleotide Reverse Transcriptase Inhibitor Plus Ritonavir-boosted Protease Inhibitor Regimen: Wee

scientific article published on 5 April 2016

Mixing and convection in the Greenland Sea from a tracer-release experiment

scientific article published in Nature

Mountain Fen Distribution, Types and Restoration Priorities, San Juan Mountains, Colorado, USA

scientific article published on 24 April 2010

Mountain Peatland Restoration: Assessment, Goals, and Approaches

Mountain Peatlands Range from CO2 Sinks at High Elevations to Sources at Low Elevations: Implications for a Changing Climate

scientific article published in 2016

Mountain wetland restoration: The role of hydrologic regime and plant introductions after 15 years in the Colorado Rocky Mountains, U.S.A.

scientific article published on 19 January 2017

Multiple pathways for woody plant establishment on floodplains at local to regional scales

article

Nitrification cessation and recovery in an aerated saturated vertical subsurface flow treatment wetland: Field studies and microscale biofilm modeling

scientific article

Nitrogen, not phosphorus, enrichment controls biomass production in alpine wetlands on the Tibetan Plateau, China

scientific article published in 2018

No effect of interleukin-2 on IgE levels given in addition to antiretroviral therapy in HIV-infected adults with CD4 >300 cells/mm3

scientific article published on 01 March 2005

Novel plant communities limit the effects of a managed flood to restore riparian forests along a large regulated river

article

Nucleoside analogue mutations and Q151M in HIV-1 subtype A/E infection treated with nucleoside reverse transcriptase inhibitors

scientific article published in September 2003

Nutrient mitigation in a temporary river basin.

scientific article

PLANT–HERBIVORE–HYDROPERIOD INTERACTIONS: EFFECTS OF NATIVE MAMMALS ON FLOODPLAIN TREE RECRUITMENT

article

Paradoxical CD4+ T-cell decline in HIV-infected patients with complete virus suppression taking tenofovir and didanosine

scientific article published in March 2005

Parallel decline of CD8+/CD38++ T cells and viraemia in response to quadruple highly active antiretroviral therapy in primary HIV infection

scientific article published in March 2002

Patterns of willow seed dispersal, seed entrapment, and seedling establishment in a heavily browsed montane riparian ecosystem

scientific article published on 22 July 2005

Pharmacokinetics and pharmacodynamics of indinavir with or without low-dose ritonavir in HIV-infected Thai patients

scientific article published on 28 March 2003

Pharmacokinetics of reduced-dose indinavir/ritonavir 400/100 mg twice daily in HIV-1-infected Thai patients

scientific article published in January 2005

Physiological and morphological response patterns of Populus deltoides to alluvial groundwater pumping

scientific article published on February 2003

Plant-Herbivore-Hydroperiod Interactions: Effects of Native Mammals on Floodplain Tree Recruitment

scientific article published in 2000

Post-fire response of riparian vegetation in a heavily browsed environment

scientific article published on 04 December 2014

Prediction of Particle Deposition from a Turbulent Stream around a Surface-Mounted Ribbon

Prevalence of metabolic syndrome in HIV-infected patients receiving highly active antiretroviral therapy using International Diabetes Foundation and Adult Treatment Panel III criteria: associations with insulin resistance, disturbed body fat compart

scientific article published in January 2007

Processesof Tamarix invasion and floodplain development along the lower Green River, Utah

scientific article published on June 2006

Prolonged transcriptional silencing and CpG methylation induced by siRNAs targeted to the HIV-1 promoter region

scientific article published on 11 October 2005

Rain and channel flow supplements to subsurface water beneath hyper-arid ephemeral stream channels

Randomized, open-label, comparative trial to evaluate the efficacy and safety of three antiretroviral drug combinations including two nucleoside analogues and nevirapine for previously untreated HIV-1 Infection: the OzCombo 2 study

scientific article published in May 2002

Rapid warming induces the contrasting growth of Yezo spruce (Picea jezoensis var. microsperma) at two elevation gradient sites of northeast China

scientific article published on 22 May 2018

Relationships between groundwater use, water table, and recovery of willow on Yellowstone's northern range

scientific article published on 18 February 2011

Relationships between vegetation type, peat hydraulic conductivity, and water table dynamics in mountain fens

article by Audrey C. Crockett et al published 14 December 2015 in Ecohydrology

Reply to: Restoration prioritization must be informed by marginalized people

scientific article published on 13 July 2022

Research in action: from AIDS to global health to impact. A symposium in recognition of the scientific contributions of Professor Joep Lange

scientific article published on 18 February 2015

Resolution of Respect: John Winton Marr 1914-1989 ⬇️

scholarly article

Restoring the Vegetation of Mined Peatlands in the Southern Rocky Mountains of Colorado, U.S.A.

scientific article published on 12 March 2003

Riparian forest productivity decline initiated by streamflow diversion then amplified by atmospheric drought 40 years later

Riparian vegetation and channel change in response to river regulation: a comparative study of regulated and unregulated streams in the Green River Basin, USA

article by David M. Merritt & David J. Cooper published 2000 in River Research and Applications

SPHAGNUM BALTICUM IN A SOUTHERN ROCKY MOUNTAIN IRON FEN

scientific article published in 2002

Safety of enfuvirtide in combination with an optimized background of antiretrovirals in treatment-experienced HIV-1-infected adults over 48 weeks

scientific article

Seasonal and diurnal surveillance of treated and untreated wastewater for human enteric viruses

scientific article published on 27 September 2018

Secondary invasions of noxious weeds associated with control of invasive Tamarix are frequent, idiosyncratic and persistent

article

Sexual transmission of HIV and the law: an Australian medical consensus statement.

scientific article published on November 2016

Short- and long-term responses of riparian cottonwoods (Populus spp.) to flow diversion: Analysis of tree-ring radial growth and stable carbon isotopes

scientific article published on 20 May 2020

Short-course antiretroviral therapy in primary HIV infection

scientific article

Short-term effect of nitrogen addition on nitric oxide emissions from an alpine meadow in the Tibetan Plateau

scientific article published on 4 May 2016

Short-term variability in biogenic sulphur emissions from a florida spartina alterniflora marsh

article

Significant differences between plasma HIV-1 RNA assays in HIV-1 subtype E infected patients treated with antiretroviral therapy.

scientific article published in June 2002

Soils and Hydrologic Processes Drive Wet Meadow Formation and Approaches to Restoration, Western USA

scientific article published on 03 August 2019

Spatial and diel variability in the emissions of some biogenic sulfur compounds from a Florida Spartinaalterniflora coastal zone

article

Spatial patterns and environmental constraints on ecosystem services at a catchment scale

scientific article

Stream hydrology limits recovery of riparian ecosystems after wolf reintroduction ⬇️

scientific article published on February 6, 2013

Strengthening international cooperation for health and biodiversity

scientific article published in December 2011

Susceptibility of Salix monticola to Cytospora canker under increased temperatures and decreased water levels

scientific article published on 04 July 2013

The Alaska Arctic Vegetation Archive (AVA-AK)

article

The Habitats of Three Boreal Fen Mosses New to the Southern Rocky Mountains of Colorado

scientific article

The High-Elevation Peatlands of the Northern Andes, Colombia

scientific article published in 2023

The Sydney Declaration: a call to scale up research

scientific article published in The Lancet

The application of wetland technology for copper removal from distillery wastewater: a case study

scientific article published in January 2009

The effects of acid rock drainage on Carex aquatilis leaf litter decomposition in rocky Mountain fens

The influence of river regulation and land use on floodplain forest regeneration in the semi-arid upper Colorado River Basin, USA

Tolerance of fen mosses to submergence, and the influence on moss community composition and ecosystem resilience

scientific article published in 2018

Towards sustainable management of Mediterranean river basins: policy recommendations on management aspects of temporary streams

scientific article published on 8 July 2013

Using Vegetation Guilds to Predict Bird Habitat Characteristics in Riparian Areas

scientific article published on 10 September 2020

Using tree ring analysis to determine impacts of a road on a boreal peatland

scientific article published on 20 September 2017

Variability ofpCO2in the tropical Atlantic in 1995

scholarly article

Vegetation response to invasive Tamarix control in southwestern U.S. rivers: a collaborative study including 416 sites.

scientific article

Viral dispersal in the coastal zone: A method to quantify water quality risk

scientific article published on 02 March 2019

Water tables constrain height recovery of willow on Yellowstone's northern range

scientific article

Wood chip soil amendments in restored wetlands affect plant growth by reducing compaction and increasing dissolved phenolics

scientific article published on 05 March 2019

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