List of works by John H Morris

An approach to functionally relevant clustering of the protein universe: Active site profile-based clustering of protein structures and sequences

scientific article published on 5 January 2017

Biocuration in the structure-function linkage database: the anatomy of a superfamily

scientific article

Biocuration in the structure-function linkage database: the anatomy of a superfamily.

scientific article

Copycat Layout: Network layout alignment via Cytoscape Automation

CyAnimator: Simple Animations of Cytoscape Networks

scientific article

Cytoscape Automation: empowering workflow-based network analysis

scientific article published on 02 September 2019

DASP3: identification of protein sequences belonging to functionally relevant groups

scientific article

Enhancing data sharing in collaborative research projects with DASH.

scientific article

From structure to systems: high-resolution, quantitative genetic analysis of RNA polymerase II.

scientific article published on 8 August 2013

Global landscape of HIV-human protein complexes

scientific article

Improving the quality of protein similarity network clustering algorithms using the network edge weight distribution

scientific article

Integration of biological networks and gene expression data using Cytoscape

scientific article (publication date: 2007)

Leveraging enzyme structure-function relationships for functional inference and experimental design: the structure-function linkage database

scientific article

Partitioning biological data with transitivity clustering

scientific article

Protein network prediction and topological analysis in Leishmania major as a tool for drug target selection

scientific article

The Cytoscape Automation app article collection.

scientific article

The International Gene Trap Consortium Website: a portal to all publicly available gene trap cell lines in mouse

scientific article

The Structure-Function Linkage Database

scientific article

UCSF ChimeraX: Structure Visualization for Researchers, Educators, and Developers

scientific article published on 03 September 2020

Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.

scientific article

aMatReader: Importing adjacency matrices via Cytoscape Automation.

scientific article published on 21 June 2018

clusterMaker: a multi-algorithm clustering plugin for Cytoscape

scientific article

structureViz: linking Cytoscape and UCSF Chimera.

scientific article

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