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List of works by Allan Peter Davis

A CTD-Pfizer collaboration: manual curation of 88,000 scientific articles text mined for drug-disease and drug-phenotype interactions.

scientific article published on 28 November 2013

Accessing an Expanded Exposure Science Module at the Comparative Toxicogenomics Database

scientific article published on 18 January 2018

Advancing Exposure Science through Chemical Data Curation and Integration in the Comparative Toxicogenomics Database

scientific article (publication date: October 2016)

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task

scientific article

BioCreative V CDR task corpus: a resource for chemical disease relation extraction

scientific article

Chemical-Induced Phenotypes at CTD Help Inform the Predisease State and Construct Adverse Outcome Pathways

scientific article published on 01 September 2018

Collaborative biocuration--text-mining development task for document prioritization for curation

scientific article

Comparative Toxicogenomics Database (CTD): update 2021

scientific article published on 17 October 2020

Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks

scientific article published on 09 September 2008

Disease model curation improvements at Mouse Genome Informatics

scientific article published on 20 March 2012

DiseaseComps: a metric that discovers similar diseases based upon common toxicogenomic profiles at CTD.

scientific article published on 14 October 2011

GeneComps and ChemComps: a new CTD metric to identify genes and chemicals with shared toxicogenomic profiles.

scientific article

Generating Gene Ontology-Disease Inferences to Explore Mechanisms of Human Disease at the Comparative Toxicogenomics Database

scientific article

Genetic and environmental pathways to complex diseases

scientific article

Leveraging the Comparative Toxicogenomics Database to fill in knowledge gaps for environmental health: a test case for air pollution-induced cardiovascular disease

scientific article published on 14 July 2020

MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database.

scientific article

Ranking transitive chemical-disease inferences using local network topology in the comparative toxicogenomics database

scientific article

Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database ⬇️

scientific article published on December 6, 2012

Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD)

scientific article (publication date: 8 October 2009)

Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the comparative toxicogenomics database

scientific article

The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study.

scientific article

The Comparative Toxicogenomics Database's 10th year anniversary: update 2015.

scientific article

The Comparative Toxicogenomics Database: update 2011.

scientific article

The Comparative Toxicogenomics Database: update 2013.

scientific article

The Comparative Toxicogenomics Database: update 2017

scientific article (publication date: 4 January 2017)

The Comparative Toxicogenomics Database: update 2019

scientific article published on 01 January 2019

The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks

scientific article

The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database

scientific article

Web services-based text-mining demonstrates broad impacts for interoperability and process simplification.

scientific article

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