List of works by Patricia L Whetzel

A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

scientific article

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

scientific article (publication date: 5 February 2014)

BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications

scientific article (publication date: July 2011)

BioSamples database: an updated sample metadata hub

scientific article published on 01 January 2019

Creating a Translational Medicine Ontology

Creating a Translational Medicine Ontology

Development of FuGO: an ontology for functional genomics investigations

scientific article published on January 2006

Getting Lucky in Ontology Search: A Data-Driven Evaluation Framework for Ontology Ranking

scientific article published at ISWC 2013

High-performance web services for querying gene and variant annotation

scientific article (publication date: 6 May 2016)

Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop

scientific article (publication date: 25 December 2010)

Mondo: Unifying diseases for the world, by the world

MyGene.info and MyVariant.info: Gene and Variant Annotation Query Services

article

NCBO Technology: Powering semantically aware applications

scientific article published on 15 April 2013

OntoMaton: a bioportal powered ontology widget for Google Spreadsheets

scientific article published on 24 December 2012

Overcoming the Ontology Enrichment Bottleneck with Quick Term Templates

Overcoming the Ontology Enrichment Bottleneck with Quick Term Templates

PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data

scientific article

Semantic infrastructure to enable collaboration in ontology development

The Biomedical Resource Ontology (BRO) to enable resource discovery in clinical and translational research

scientific article

The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics

article

The MGED Ontology: a resource for semantics-based description of microarray experiments

scientific article published on 21 January 2006

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019

scientific article published on 01 January 2019

The NIDDK Information Network: A Community Portal for Finding Data, Materials, and Tools for Researchers Studying Diabetes, Digestive, and Kidney Diseases

scientific article

The National Center for Biomedical Ontology

scientific article

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

scientific article published in November 2007

The Ontology for Biomedical Investigations

scientific article

The Plasmodium genome database

scientific article published in Nature

The SmartAPI Ecosystem for Making Web APIs FAIR

scientific article published in proceedings of the iswc 2017 posters & demonstrations and industry tracks

The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside ⬇️

scientific article (publication date: 17 May 2011)

The minimum information about a genome sequence (MIGS) specification

scientific article

Towards BioDBcore: a community-defined information specification for biological databases

scientific article

Towards BioDBcore: a community-defined information specification for biological databases

scientific article (publication date: 2011)

Transposon mutagenesis of Mycoplasma gallisepticum

scientific article

Using ontologies to annotate microarray experiments

scientific article published on January 2006

VO: Vaccine Ontology

VO: Vaccine Ontology

VO: Vaccine Ontology

VO: Vaccine Ontology

Wrestling with SUMO and bio-ontologies.

scientific article

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